RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PARP8Q8N3A8 854 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 TRUB1Q8WWH5 349 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 SGCDQ92629 289 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 NSUN5Q96P11 429 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 PRKD2Q9BZL6 878 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 TP63Q9H3D4 680 aaPredicted RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 NANOGQ9H9S0 305 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 TLR8Q9NR97 1041 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 KLHL3Q9UH77 587 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 TRAF6Q9Y4K3 522 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 CDH23Q9H251 3354 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 EEF1DP29692 281 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 LEPRP48357 1165 aaKnown RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 LRP8Q14114 963 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 TRIP4Q15650 581 aaPredicted RBP13.78□□□□□ -0.2
SF1-202ENST00000334944 AGAP9Q5VTM2 703 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 MSANTD2Q6P1R3 559 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 LINGO4Q6UY18 593 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 ANKRD60Q9BZ19 345 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 MARCH5Q9NX47 278 aa13.78□□□□□ -0.2
SF1-202ENST00000334944 A0A087X1B8 175 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 A0A1W2PQ45 241 aaPredicted RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 A0A1W2PQY0 241 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 NCF1BA6NI72 391 aaPredicted RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 NCF1CA8MVU1 366 aaPredicted RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 E7ENX8 843 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 HSPA8P11142 646 aaKnown RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 NCF1P14598 390 aaPredicted RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 ATF6P18850 670 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 RAB15P59190 212 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 SP3Q02447 781 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 PRKCQQ04759 706 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 FAM26DQ5JW98 314 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 UBE2UQ5VVX9 321 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 PSD4Q8NDX1 1056 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 RMDN1Q96DB5 314 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 SCLYQ96I15 445 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 FUBP3Q96I24 572 aaKnown RBP eCLIP13.77□□□□□ -0.2
SF1-202ENST00000334944 KCNA7Q96RP8 456 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 ZBED2Q9BTP6 218 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 ZBTB26Q9HCK0 441 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 BPIFA1Q9NP55 256 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 CNOT6Q9ULM6 557 aaKnown RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 PCDHB7Q9Y5E2 793 aa13.77□□□□□ -0.2
SF1-202ENST00000334944 ZFP37Q9Y6Q3 630 aaPredicted RBP13.77□□□□□ -0.2
SF1-202ENST00000334944 UBXN8O00124 270 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 JRKO75564 520 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 ENDOUP21128 410 aaKnown RBP13.77□□□□□ -0.21
SF1-202ENST00000334944 TACR2P21452 398 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 TM4SF4P48230 202 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 FPGSQ05932 587 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 AGKQ53H12 422 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 FUT10Q6P4F1 479 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 PIWIL4Q7Z3Z4 852 aaKnown RBP13.77□□□□□ -0.21
SF1-202ENST00000334944 HTRA1Q92743 480 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 TFAP2CQ92754 450 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 ESAMQ96AP7 390 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 C3orf30Q96M34 536 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 CSF3RQ99062 836 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 IL1RL2Q9HB29 575 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 FANCEQ9HB96 536 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 ATP13A1Q9HD20 1204 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 DNMT3BQ9UBC3 853 aaKnown RBP13.77□□□□□ -0.21
SF1-202ENST00000334944 PRELID1Q9Y255 219 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 GREB1Q4ZG55 1949 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 RNF103-CHMP3A0A140T963 221 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 A0A1B0GTL3 188 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 TCAF2A6NFQ2 919 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 H3BMM5 538 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 DCKP27707 260 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 E2F2Q14209 437 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 PFKFB4Q16877 469 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
SF1-202ENST00000334944 ISCA2Q86U28 154 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 HEATR4Q86WZ0 1026 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 DCBLD1Q8N8Z6 715 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 HMGCLL1Q8TB92 370 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 SPPL2BQ8TCT7 592 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 POLR1EQ9GZS1 481 aaKnown RBP13.77□□□□□ -0.21
SF1-202ENST00000334944 ARNT2Q9HBZ2 717 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 MRGBPQ9NV56 204 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 SCHIP1Q9P0W5 487 aaPredicted RBP13.77□□□□□ -0.21
SF1-202ENST00000334944 ITM2BQ9Y287 266 aa13.77□□□□□ -0.21
SF1-202ENST00000334944 MROH6A6NGR9 719 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 TBKBP1A7MCY6 615 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 WASH4PA8MWX3 477 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 CBX4O00257 560 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 ENPP3O14638 875 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 CD3EAPO15446 510 aaKnown RBP13.76□□□□□ -0.21
SF1-202ENST00000334944 MT-ND1P03886 318 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 FMO4P31512 558 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 PRKAA2P54646 552 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 FOXA1P55317 472 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 GPNMBQ14956 572 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 RFPL4BQ6ZWI9 263 aa13.76□□□□□ -0.21
SF1-202ENST00000334944 LRRC8DQ7L1W4 858 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms