RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RCAN2Q14206 197 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 CLCA4Q14CN2 919 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 FAM219BQ5XKK7 198 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 METTL4Q8N3J2 472 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 TRPM4Q8TD43 1214 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 PABPN1LA6NDY0 278 aaKnown RBP24.12■■□□□ 1.45
SOX1-201ENST00000330949 H3BMM5 538 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 NOBOXO60393 691 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 IQCF3P0C7M6 154 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 SULT1E1P49888 294 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 TRAF3Q13114 568 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 ZNF280DQ6N043 979 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 C2CD4AQ8NCU7 369 aaPredicted RBP24.12■■□□□ 1.45
SOX1-201ENST00000330949 REXO5Q96IC2 774 aaKnown RBP24.12■■□□□ 1.45
SOX1-201ENST00000330949 VAT1Q99536 393 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 CLPBQ9H078 707 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 UBP1Q9NZI7 540 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 DNAJB9Q9UBS3 223 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 LEF1Q9UJU2 399 aaPredicted RBP24.12■■□□□ 1.45
SOX1-201ENST00000330949 DSEQ9UL01 958 aa24.12■■□□□ 1.45
SOX1-201ENST00000330949 XPNPEP2O43895 674 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 ANGPTL1O95841 491 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 FGF4P08620 206 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 OR4D2P58180 307 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 NOL9Q5SY16 702 aaKnown RBP24.11■■□□□ 1.45
SOX1-201ENST00000330949 PRR23BQ6ZRT6 265 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 RALGPS2Q86X27 583 aaPredicted RBP24.11■■□□□ 1.45
SOX1-201ENST00000330949 SEPT1Q8WYJ6 367 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 USP22Q9UPT9 525 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 TPRKBQ9Y3C4 175 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PCDHGA10Q9Y5H3 936 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 MAU2Q9Y6X3 613 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 NRCAMQ92823 1304 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 CNTN5O94779 1100 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 MATKP42679 507 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 CCNA1P78396 465 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 CDK5R2Q13319 367 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 SLC25A52Q3SY17 297 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 DALRD3Q5D0E6 543 aaKnown RBP24.11■■□□□ 1.45
SOX1-201ENST00000330949 GJC2Q5T442 439 aaPredicted RBP24.11■■□□□ 1.45
SOX1-201ENST00000330949 FAM160B1Q5W0V3 765 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 UTS2BQ765I0 119 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 FAM83FQ8NEG4 500 aaPredicted RBP24.11■■□□□ 1.45
SOX1-201ENST00000330949 TMEM246Q9BRR3 403 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 COMMD8Q9NX08 183 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PARP14Q460N5 1801 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 HAT1O14929 419 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PSMD3O43242 534 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 LCP1P13796 627 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 IFNA8P32881 189 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 OAZ1P54368 228 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 RACK1P63244 317 aaKnown RBP24.11■■□□□ 1.45
SOX1-201ENST00000330949 EMX2Q04743 252 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 C19orf57Q0VDD7 668 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PLEKHG6Q3KR16 790 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 CEP78Q5JTW2 689 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PAGE3Q5JUK9 113 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 GALNT12Q8IXK2 581 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PIF1Q9H611 641 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 TM9SF3Q9HD45 589 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 ERVK-18Q9QC07 812 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 OPTCQ9UBM4 332 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 PTGDR2Q9Y5Y4 395 aa24.11■■□□□ 1.45
SOX1-201ENST00000330949 IGKV6D-21A0A0A0MT36 114 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 MAP2K4P45985 399 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 SH3BP2P78314 561 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 FADDQ13158 208 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 NPTX1Q15818 432 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 CCDC81Q6ZN84 652 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 GDPD3Q7L5L3 318 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 EGLN2Q96KS0 407 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 ASB7Q9H672 318 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 GPSM3Q9Y4H4 160 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
SOX1-201ENST00000330949 EFCAB9A8MZ26 197 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 AZIN1O14977 448 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 CASP2P42575 452 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 MVKQ03426 396 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 UNC50Q53HI1 259 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 ESRP1Q6NXG1 681 aaKnown RBP24.1■■□□□ 1.45
SOX1-201ENST00000330949 TSPAN17Q96FV3 270 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 DCSTAMPQ9H295 470 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 SLA2Q9H6Q3 261 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 TMPRSS4Q9NRS4 437 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 PNMA8BQ9ULN7 279 aaPredicted RBP24.1■■□□□ 1.45
SOX1-201ENST00000330949 GPR45Q9Y5Y3 372 aa24.1■■□□□ 1.45
SOX1-201ENST00000330949 PHIPQ8WWQ0 1821 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 ASPDHA6ND91 283 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 CLDN24A6NM45 220 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 ANXA6P08133 673 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 STAG3L1P0CL83 205 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 PAMP19021 973 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 MAGP20916 626 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 FSHRP23945 695 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 ARNTP27540 789 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 HTR3AP46098 478 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 OR2B6P58173 313 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 HERVK_113P63132 956 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 RBP5P82980 135 aa24.09■■□□□ 1.45
SOX1-201ENST00000330949 GRIK2Q13002 908 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms