RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 R3HDMLQ9H3Y0 253 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 ADPRHL2Q9NX46 363 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 MAGEL2Q9UJ55 1249 aa13.63□□□□□ -0.23
NFKB1-201ENST00000226574 CRYBG1Q9Y4K1 1723 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 SNPHO15079 494 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 PRKD3O94806 890 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 HOXB8P17481 243 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 GNPDA1P46926 289 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 INO80DQ53TQ3 878 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 C14orf80Q86SX3 495 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 RTL3Q8N8U3 475 aaKnown RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 FAR1Q8WVX9 515 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TAMM41Q96BW9 452 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 MUS81Q96NY9 551 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 FCRL5Q96RD9 977 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 CRTAC1Q9NQ79 661 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 EURLQ9NYK6 297 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 EVLQ9UI08 416 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 EMCNQ9ULC0 261 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 BBIP1A8MTZ0 92 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TBL1XO60907 577 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TNFRSF21O75509 655 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 NDST3O95803 873 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 C1RP00736 705 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 GPIP06744 558 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 ST8SIA6P61647 398 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 COL9A2Q14055 689 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 INTS6LQ5JSJ4 861 aaKnown RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 SPPL2BQ8TCT7 592 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 MRPS31Q92665 395 aaKnown RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TMBIM1Q969X1 311 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 SLC9A7Q96T83 725 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 PAAF1Q9BRP4 392 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TEX12Q9BXU0 123 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 ZDHHC6Q9H6R6 413 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 DERAQ9Y315 318 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 SMIM35A0A1B0GVV1 85 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 PIPSLA2A3N6 862 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 PPP6CO00743 305 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 RPS7P62081 194 aaKnown RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 CLDN10P78369 228 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TUSC3Q13454 348 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 DNASE1L3Q13609 305 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 HIST2H2ACQ16777 129 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-201ENST00000226574 SH3D19Q5HYK7 790 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 PDZK1Q5T2W1 519 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 HIST2H2AA3Q6FI13 130 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 PPP4R4Q6NUP7 873 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 RNF180Q86T96 592 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 TRPV3Q8NET8 790 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 DEPDC7Q96QD5 511 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 RAB23Q9ULC3 237 aa13.62□□□□□ -0.23
NFKB1-201ENST00000226574 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 A0A0U1RQS6 177 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 IRAK2O43187 625 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 EPORP19235 508 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 OR1D2P34982 312 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ATXN7L2Q5T6C5 722 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-201ENST00000226574 PRR23BQ6ZRT6 265 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 CXCL16Q9H2A7 254 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 CHD4Q14839 1912 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 KPNA3O00505 521 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-201ENST00000226574 C1QTNF8P60827 252 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 HERVK_113P63132 956 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 MXD1Q05195 221 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 TAB1Q15750 504 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ZNF284Q2VY69 593 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 CLIP4Q8N3C7 705 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 CAMKK1Q8N5S9 505 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ARNTL2Q8WYA1 636 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 KLHL32Q96NJ5 620 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ERVK-6Q9BXR3 956 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 LRTM1Q9HBL6 345 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 GKN1Q9NS71 199 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 CLDN25C9JDP6 229 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ARVCFO00192 962 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 SLC7A4O43246 635 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 XPNPEP2O43895 674 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 PRSS56P0CW18 603 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 CAMK2GQ13555 558 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ZBED5Q49AG3 693 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 XKR6Q5GH73 641 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 FBXL19Q6PCT2 694 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 LIX1Q8N485 282 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 NLGN2Q8NFZ4 835 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
NFKB1-201ENST00000226574 ECI2O75521 394 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 SIRPB2Q5JXA9 342 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 TMEM135Q86UB9 458 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 PHACTR4Q8IZ21 702 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 TMEM209Q96SK2 561 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
NFKB1-201ENST00000226574 ABCB9Q9NP78 766 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms