RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 UTP5Q04177 643 aaKnown RBP3.55□□□□□ -1.84
snR49snR49 TRL1P09880 827 aaKnown RBP3.54□□□□□ -1.84
snR49snR49 SRO9P25567 434 aaKnown RBP3.54□□□□□ -1.84
snR49snR49 MTR4P47047 1073 aaKnown RBP3.54□□□□□ -1.84
snR49snR49 GPI13Q07830 1017 aa3.54□□□□□ -1.84
snR49snR49 PNS1Q12412 539 aa3.54□□□□□ -1.84
snR49snR49 YJL045WP47052 634 aa3.53□□□□□ -1.84
snR49snR49 NOC3Q07896 663 aaPredicted RBP3.53□□□□□ -1.84
snR49snR49 RSC58Q07979 502 aa3.53□□□□□ -1.84
snR49snR49 HRK1Q08732 759 aaKnown RBP3.53□□□□□ -1.84
snR49snR49 MSH3P25336 1018 aa3.52□□□□□ -1.85
snR49snR49 HSE1P38753 452 aa3.52□□□□□ -1.85
snR49snR49 TAT2P38967 592 aa3.52□□□□□ -1.85
snR49snR49 MPT5P39016 859 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
snR49snR49 XKS1P42826 600 aa3.52□□□□□ -1.85
snR49snR49 SPT20P50875 604 aa3.52□□□□□ -1.85
snR49snR49 UBP3Q01477 912 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
snR49snR49 YCS4Q06156 1176 aa3.52□□□□□ -1.85
snR49snR49 SPS1P08458 490 aa3.51□□□□□ -1.85
snR49snR49 QNS1P38795 714 aaKnown RBP3.51□□□□□ -1.85
snR49snR49 LAM1P38851 1228 aa3.51□□□□□ -1.85
snR49snR49 MEF2P39677 819 aa3.51□□□□□ -1.85
snR49snR49 YNR063WP53749 607 aa3.51□□□□□ -1.85
snR49snR49 SGD1Q06132 899 aa3.51□□□□□ -1.85
snR49snR49 LAP2Q10740 671 aa3.51□□□□□ -1.85
snR49snR49 FRT1Q99332 602 aa3.51□□□□□ -1.85
snR49snR49 YSC84P32793 468 aa3.5□□□□□ -1.85
snR49snR49 MDJ2P42834 146 aa3.5□□□□□ -1.85
snR49snR49 PEX13P80667 386 aa3.5□□□□□ -1.85
snR49snR49 RPL34AP87262 121 aaPredicted RBP3.5□□□□□ -1.85
snR49snR49 GCN5Q03330 439 aa3.5□□□□□ -1.85
snR49snR49 RCL1Q08096 367 aaPredicted RBP3.5□□□□□ -1.85
snR49snR49 GRS1P38088 690 aaKnown RBP3.49□□□□□ -1.85
snR49snR49 SAM37P50110 327 aa3.49□□□□□ -1.85
snR49snR49 ENV11P53246 860 aa3.49□□□□□ -1.85
snR49snR49 YOR352WQ08816 343 aa3.49□□□□□ -1.85
snR49snR49 VMA4P22203 233 aaKnown RBP3.48□□□□□ -1.85
snR49snR49 UGA4P32837 571 aa3.48□□□□□ -1.85
snR49snR49 YPT53P36019 220 aa3.48□□□□□ -1.85
snR49snR49 PLB2Q03674 706 aa3.48□□□□□ -1.85
snR49snR49 NUT2Q06213 157 aa3.48□□□□□ -1.85
snR49snR49 NBA1Q08229 501 aaKnown RBP3.48□□□□□ -1.85
snR49snR49 PUS9Q12069 462 aa3.48□□□□□ -1.85
snR49snR49 CYC1P00044 109 aaPredicted RBP3.47□□□□□ -1.85
snR49snR49 TRM2P33753 639 aa3.47□□□□□ -1.85
snR49snR49 ATG14P38270 344 aa3.47□□□□□ -1.85
snR49snR49 ERP5P38819 212 aa3.47□□□□□ -1.85
snR49snR49 SLI1P53304 468 aa3.47□□□□□ -1.85
snR49snR49 ROT1Q03691 256 aa3.47□□□□□ -1.85
snR49snR49 DUS4Q06063 367 aa3.47□□□□□ -1.85
snR49snR49 SCP160P06105 1222 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
snR49snR49 PRP40P33203 583 aaKnown RBP3.46□□□□□ -1.86
snR49snR49 ADD66P36040 267 aa3.46□□□□□ -1.86
snR49snR49 RDH54P38086 958 aa3.46□□□□□ -1.86
snR49snR49 PEX28P38848 579 aa3.46□□□□□ -1.86
snR49snR49 VPS53P47061 822 aa3.46□□□□□ -1.86
snR49snR49 HNT2P49775 206 aa3.46□□□□□ -1.86
snR49snR49 RKM2Q03942 479 aa3.46□□□□□ -1.86
snR49snR49 SPO21Q12411 609 aa3.46□□□□□ -1.86
snR49snR49 HEM13P11353 328 aaKnown RBP3.45□□□□□ -1.86
snR49snR49 KIP1P28742 1111 aa3.45□□□□□ -1.86
snR49snR49 DOM34P33309 386 aa3.45□□□□□ -1.86
snR49snR49 BAP2P38084 609 aa3.45□□□□□ -1.86
snR49snR49 CIC1P38779 376 aaKnown RBP3.45□□□□□ -1.86
snR49snR49 SEC26P41810 973 aaKnown RBP3.45□□□□□ -1.86
snR49snR49 RSM26P47141 266 aa3.45□□□□□ -1.86
snR49snR49 MSE1P48525 536 aa3.45□□□□□ -1.86
snR49snR49 ULP1Q02724 621 aa3.45□□□□□ -1.86
snR49snR49 COQ4O13525 335 aa3.44□□□□□ -1.86
snR49snR49 PUF4P25339 888 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
snR49snR49 AFG2P32794 780 aa3.44□□□□□ -1.86
snR49snR49 SUN4P53616 420 aa3.44□□□□□ -1.86
snR49snR49 YBL113CQ7M4S9 792 aa3.44□□□□□ -1.86
snR49snR49 SNF5P18480 905 aa3.43□□□□□ -1.86
snR49snR49 SRM1P21827 482 aa3.43□□□□□ -1.86
snR49snR49 CDC20P26309 610 aa3.43□□□□□ -1.86
snR49snR49 SQT1P35184 431 aa3.43□□□□□ -1.86
snR49snR49 CCZ1P38273 704 aa3.43□□□□□ -1.86
snR49snR49 GPB2P39717 880 aa3.43□□□□□ -1.86
snR49snR49 YGL140CP53120 1219 aa3.43□□□□□ -1.86
snR49snR49 HOS3Q02959 697 aaKnown RBP3.43□□□□□ -1.86
snR49snR49 DAL4Q04895 635 aa3.43□□□□□ -1.86
snR49snR49 HCM1P25364 564 aa3.42□□□□□ -1.86
snR49snR49 LST4P34239 828 aa3.42□□□□□ -1.86
snR49snR49 TNA1P53322 534 aa3.42□□□□□ -1.86
snR49snR49 EST2Q06163 884 aa3.42□□□□□ -1.86
snR49snR49 RSB1Q08417 382 aa3.42□□□□□ -1.86
snR49snR49 GAL10P04397 699 aa3.41□□□□□ -1.86
snR49snR49 CDC6P09119 513 aa3.41□□□□□ -1.86
snR49snR49 KAR2P16474 682 aaKnown RBP3.41□□□□□ -1.86
snR49snR49 PIK1P39104 1066 aa3.41□□□□□ -1.86
snR49snR49 MNN10P50108 393 aaKnown RBP3.41□□□□□ -1.86
snR49snR49 MCM6P53091 1017 aaKnown RBP3.41□□□□□ -1.86
snR49snR49 TMA10Q06177 86 aa3.41□□□□□ -1.86
snR49snR49 TOS4Q06266 489 aa3.41□□□□□ -1.86
snR49snR49 ACK1Q07622 623 aaPredicted RBP3.41□□□□□ -1.86
snR49snR49 CMP2P14747 604 aa3.4□□□□□ -1.87
snR49snR49 CDC3P32457 520 aaKnown RBP3.4□□□□□ -1.87
snR49snR49 VPS35P34110 944 aa3.4□□□□□ -1.87
snR49snR49 RXT3Q07458 294 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms