RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	ORC3	P54790	616 aa		4.2	□□□□□ -1.74
YPR039W	YPR039W	YDL177C	Q12257	170 aa		4.2	□□□□□ -1.74
YPR039W	YPR039W	THI80	P35202	319 aa		4.19	□□□□□ -1.74
YPR039W	YPR039W	ETP1	P38748	585 aa	Known RBP	4.19	□□□□□ -1.74
YPR039W	YPR039W	PEX28	P38848	579 aa		4.19	□□□□□ -1.74
YPR039W	YPR039W	RSA3	Q05942	220 aa	Known RBP	4.19	□□□□□ -1.74
YPR039W	YPR039W	HEM13	P11353	328 aa	Known RBP	4.18	□□□□□ -1.74
YPR039W	YPR039W	VPS35	P34110	944 aa		4.18	□□□□□ -1.74
YPR039W	YPR039W	THI12	P42883	340 aa		4.18	□□□□□ -1.74
YPR039W	YPR039W	THI5	P43534	340 aa		4.18	□□□□□ -1.74
YPR039W	YPR039W	THI11	P47183	340 aa		4.18	□□□□□ -1.74
YPR039W	YPR039W	THI13	Q07748	340 aa		4.18	□□□□□ -1.74
YPR039W	YPR039W	WHI5	Q12416	295 aa		4.18	□□□□□ -1.74
YPR039W	YPR039W	SAM35	P14693	329 aa		4.17	□□□□□ -1.74
YPR039W	YPR039W	SQT1	P35184	431 aa		4.17	□□□□□ -1.74
YPR039W	YPR039W	AIM3	P38266	947 aa	Known RBP	4.17	□□□□□ -1.74
YPR039W	YPR039W	YHL012W	P38709	493 aa		4.17	□□□□□ -1.74
YPR039W	YPR039W	SSF1	P38789	453 aa	Predicted RBP	4.17	□□□□□ -1.74
YPR039W	YPR039W	YCR015C	P25616	317 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	GCD6	P32501	712 aa	Known RBP	4.16	□□□□□ -1.74
YPR039W	YPR039W	YKL222C	P35995	705 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	FAA3	P39002	694 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	YJL045W	P47052	634 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	MRPL22	P53881	309 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	ESC8	Q08119	714 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	MSC6	Q08818	692 aa	Known RBP	4.16	□□□□□ -1.74
YPR039W	YPR039W	LAP2	Q10740	671 aa		4.16	□□□□□ -1.74
YPR039W	YPR039W	VMA4	P22203	233 aa	Known RBP	4.15	□□□□□ -1.75
YPR039W	YPR039W	AIM26	P32858	118 aa		4.15	□□□□□ -1.75
YPR039W	YPR039W	ATG14	P38270	344 aa		4.15	□□□□□ -1.75
YPR039W	YPR039W	QNS1	P38795	714 aa	Known RBP	4.15	□□□□□ -1.75
YPR039W	YPR039W	YGL140C	P53120	1219 aa		4.15	□□□□□ -1.75
YPR039W	YPR039W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
YPR039W	YPR039W	KAR2	P16474	682 aa	Known RBP	4.14	□□□□□ -1.75
YPR039W	YPR039W	RPT1	P33299	467 aa	Known RBP	4.14	□□□□□ -1.75
YPR039W	YPR039W	ADD66	P36040	267 aa		4.14	□□□□□ -1.75
YPR039W	YPR039W	RDH54	P38086	958 aa		4.14	□□□□□ -1.75
YPR039W	YPR039W	HSE1	P38753	452 aa		4.14	□□□□□ -1.75
YPR039W	YPR039W	RCL1	Q08096	367 aa	Predicted RBP	4.14	□□□□□ -1.75
YPR039W	YPR039W	OXR1	Q08952	273 aa		4.14	□□□□□ -1.75
YPR039W	YPR039W	DED1	P06634	604 aa	Known RBP	4.13	□□□□□ -1.75
YPR039W	YPR039W	PRP6	P19735	899 aa	Predicted RBP	4.13	□□□□□ -1.75
YPR039W	YPR039W	PPX1	P38698	397 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	IPL1	P38991	367 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	STM1	P39015	273 aa	Known RBP	4.13	□□□□□ -1.75
YPR039W	YPR039W	GPB2	P39717	880 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	GIP4	P39732	760 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	PIC2	P40035	300 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
YPR039W	YPR039W	YPL109C	Q02981	657 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	ADI1	Q03677	179 aa		4.13	□□□□□ -1.75
YPR039W	YPR039W	AFG2	P32794	780 aa		4.12	□□□□□ -1.75
YPR039W	YPR039W	MDL2	P33311	773 aa		4.12	□□□□□ -1.75
YPR039W	YPR039W	FLR1	P38124	548 aa		4.12	□□□□□ -1.75
YPR039W	YPR039W	EST2	Q06163	884 aa		4.12	□□□□□ -1.75
YPR039W	YPR039W	HRK1	Q08732	759 aa	Known RBP	4.12	□□□□□ -1.75
YPR039W	YPR039W	HXK1	P04806	485 aa	Known RBP	4.11	□□□□□ -1.75
YPR039W	YPR039W	YSC84	P32793	468 aa		4.11	□□□□□ -1.75
YPR039W	YPR039W	TOD6	P34219	525 aa		4.11	□□□□□ -1.75
YPR039W	YPR039W	YPL277C	Q08989	487 aa		4.11	□□□□□ -1.75
YPR039W	YPR039W	KIP1	P28742	1111 aa		4.1	□□□□□ -1.75
YPR039W	YPR039W	FOL2	P51601	243 aa	Known RBP	4.1	□□□□□ -1.75
YPR039W	YPR039W	SLD2	P34252	453 aa		4.09	□□□□□ -1.75
YPR039W	YPR039W	VPS53	P47061	822 aa		4.09	□□□□□ -1.75
YPR039W	YPR039W	YML020W	Q03722	664 aa		4.09	□□□□□ -1.75
YPR039W	YPR039W	RKM2	Q03942	479 aa		4.09	□□□□□ -1.75
YPR039W	YPR039W	RSC58	Q07979	502 aa		4.09	□□□□□ -1.75
YPR039W	YPR039W	SPO21	Q12411	609 aa		4.09	□□□□□ -1.75
YPR039W	YPR039W	RPS13	P05756	151 aa	Known RBP	4.08	□□□□□ -1.76
YPR039W	YPR039W	SEC23	P15303	768 aa	Known RBP	4.08	□□□□□ -1.76
YPR039W	YPR039W	SEC20	P28791	383 aa		4.08	□□□□□ -1.76
YPR039W	YPR039W	ALG3	P38179	458 aa		4.08	□□□□□ -1.76
YPR039W	YPR039W	RIM8	P53179	542 aa		4.08	□□□□□ -1.76
YPR039W	YPR039W	SNO2	P53823	222 aa		4.08	□□□□□ -1.76
YPR039W	YPR039W	PTC5	Q12511	572 aa		4.08	□□□□□ -1.76
YPR039W	YPR039W	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
YPR039W	YPR039W	SRO9	P25567	434 aa	Known RBP	4.07	□□□□□ -1.76
YPR039W	YPR039W	YFL054C	P43549	646 aa		4.07	□□□□□ -1.76
YPR039W	YPR039W	RAT1	Q02792	1006 aa	Known RBP	4.07	□□□□□ -1.76
YPR039W	YPR039W	ROD1	Q02805	837 aa		4.07	□□□□□ -1.76
YPR039W	YPR039W	SEN54	Q02825	467 aa	Predicted RBP	4.07	□□□□□ -1.76
YPR039W	YPR039W	HDA2	Q06629	674 aa		4.07	□□□□□ -1.76
YPR039W	YPR039W	SOD2	P00447	233 aa		4.06	□□□□□ -1.76
YPR039W	YPR039W	ABZ1	P37254	787 aa	Predicted RBP	4.06	□□□□□ -1.76
YPR039W	YPR039W	HOS3	Q02959	697 aa	Known RBP	4.06	□□□□□ -1.76
YPR039W	YPR039W	MCM2	P29469	868 aa		4.05	□□□□□ -1.76
YPR039W	YPR039W	RPS26A	P39938	119 aa	Known RBP	4.05	□□□□□ -1.76
YPR039W	YPR039W	RPS26B	P39939	119 aa	Known RBP	4.05	□□□□□ -1.76
YPR039W	YPR039W	NOP8	Q08287	484 aa	Predicted RBP	4.05	□□□□□ -1.76
YPR039W	YPR039W	COQ4	O13525	335 aa		4.04	□□□□□ -1.76
YPR039W	YPR039W	CYC1	P00044	109 aa	Predicted RBP	4.04	□□□□□ -1.76
YPR039W	YPR039W	PRE9	P23638	258 aa	Known RBP	4.04	□□□□□ -1.76
YPR039W	YPR039W	MRPS18	P42847	217 aa		4.04	□□□□□ -1.76
YPR039W	YPR039W	PLB2	Q03674	706 aa		4.04	□□□□□ -1.76
YPR039W	YPR039W	ROT1	Q03691	256 aa		4.04	□□□□□ -1.76
YPR039W	YPR039W	NBA1	Q08229	501 aa	Known RBP	4.04	□□□□□ -1.76
YPR039W	YPR039W	RAD2	P07276	1031 aa		4.03	□□□□□ -1.76
YPR039W	YPR039W	SNF5	P18480	905 aa		4.03	□□□□□ -1.76
YPR039W	YPR039W	BAP2	P38084	609 aa		4.03	□□□□□ -1.76
YPR039W	YPR039W	YGR122W	P53272	402 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms