RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	YCS4	Q06156	1176 aa		5.74	□□□□□ -1.49
RSA1	YPL193W	SAM35	P14693	329 aa		5.73	□□□□□ -1.49
RSA1	YPL193W	CDC3	P32457	520 aa	Known RBP	5.73	□□□□□ -1.49
RSA1	YPL193W	HSE1	P38753	452 aa		5.73	□□□□□ -1.49
RSA1	YPL193W	RSA3	Q05942	220 aa	Known RBP	5.73	□□□□□ -1.49
RSA1	YPL193W	YPL277C	Q08989	487 aa		5.73	□□□□□ -1.49
RSA1	YPL193W	LAP2	Q10740	671 aa		5.73	□□□□□ -1.49
RSA1	YPL193W	HAT1	Q12341	374 aa		5.73	□□□□□ -1.49
RSA1	YPL193W	UGA4	P32837	571 aa		5.72	□□□□□ -1.49
RSA1	YPL193W	CIC1	P38779	376 aa	Known RBP	5.72	□□□□□ -1.49
RSA1	YPL193W	RSM26	P47141	266 aa		5.72	□□□□□ -1.49
RSA1	YPL193W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	RIP-Chip
RSA1	YPL193W	NOG1	Q02892	647 aa	Known RBP	5.72	□□□□□ -1.49
RSA1	YPL193W	RPS13	P05756	151 aa	Known RBP	5.71	□□□□□ -1.5
RSA1	YPL193W	MDL2	P33311	773 aa		5.71	□□□□□ -1.5
RSA1	YPL193W	YJL045W	P47052	634 aa		5.71	□□□□□ -1.5
RSA1	YPL193W	HDA2	Q06629	674 aa		5.71	□□□□□ -1.5
RSA1	YPL193W	HRK1	Q08732	759 aa	Known RBP	5.71	□□□□□ -1.5
RSA1	YPL193W	SOD2	P00447	233 aa		5.7	□□□□□ -1.5
RSA1	YPL193W	SNO2	P53823	222 aa		5.7	□□□□□ -1.5
RSA1	YPL193W	PRP40	P33203	583 aa	Known RBP	5.68	□□□□□ -1.5
RSA1	YPL193W	SQT1	P35184	431 aa		5.68	□□□□□ -1.5
RSA1	YPL193W	DAL4	Q04895	635 aa		5.67	□□□□□ -1.5
RSA1	YPL193W	QNS1	P38795	714 aa	Known RBP	5.66	□□□□□ -1.5
RSA1	YPL193W	ULP1	Q02724	621 aa		5.66	□□□□□ -1.5
RSA1	YPL193W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
RSA1	YPL193W	VMA4	P22203	233 aa	Known RBP	5.65	□□□□□ -1.5
RSA1	YPL193W	PEX28	P38848	579 aa		5.65	□□□□□ -1.5
RSA1	YPL193W	YOR352W	Q08816	343 aa		5.65	□□□□□ -1.5
RSA1	YPL193W	SPS1	P08458	490 aa		5.64	□□□□□ -1.51
RSA1	YPL193W	SRO9	P25567	434 aa	Known RBP	5.64	□□□□□ -1.51
RSA1	YPL193W	YHL050C	P38721	697 aa		5.64	□□□□□ -1.51
RSA1	YPL193W	YHR219W	P38900	624 aa		5.64	□□□□□ -1.51
RSA1	YPL193W	YSC84	P32793	468 aa		5.63	□□□□□ -1.51
RSA1	YPL193W	RSC58	Q07979	502 aa		5.63	□□□□□ -1.51
RSA1	YPL193W	KAR2	P16474	682 aa	Known RBP	5.62	□□□□□ -1.51
RSA1	YPL193W	ADD66	P36040	267 aa		5.62	□□□□□ -1.51
RSA1	YPL193W	SHM2	P37291	469 aa	Known RBP	5.62	□□□□□ -1.51
RSA1	YPL193W	CLU1	Q03690	1277 aa	Known RBP	5.62	□□□□□ -1.51
RSA1	YPL193W	RCL1	Q08096	367 aa	Predicted RBP	5.62	□□□□□ -1.51
RSA1	YPL193W	NBA1	Q08229	501 aa	Known RBP	5.62	□□□□□ -1.51
RSA1	YPL193W	YLR358C	O13565	187 aa		5.61	□□□□□ -1.51
RSA1	YPL193W	GEF1	P37020	779 aa		5.61	□□□□□ -1.51
RSA1	YPL193W	GPB2	P39717	880 aa		5.61	□□□□□ -1.51
RSA1	YPL193W	SPT20	P50875	604 aa		5.61	□□□□□ -1.51
RSA1	YPL193W	TOS4	Q06266	489 aa		5.61	□□□□□ -1.51
RSA1	YPL193W	GCD6	P32501	712 aa	Known RBP	5.6	□□□□□ -1.51
RSA1	YPL193W	ABZ1	P37254	787 aa	Predicted RBP	5.6	□□□□□ -1.51
RSA1	YPL193W	VPS53	P47061	822 aa		5.6	□□□□□ -1.51
RSA1	YPL193W	DED1	P06634	604 aa	Known RBP	5.59	□□□□□ -1.51
RSA1	YPL193W	PHO4	P07270	312 aa	Known RBP	5.59	□□□□□ -1.51
RSA1	YPL193W	HEM13	P11353	328 aa	Known RBP	5.59	□□□□□ -1.51
RSA1	YPL193W	KIP1	P28742	1111 aa		5.59	□□□□□ -1.51
RSA1	YPL193W	VPS35	P34110	944 aa		5.59	□□□□□ -1.51
RSA1	YPL193W	YGL140C	P53120	1219 aa		5.59	□□□□□ -1.51
RSA1	YPL193W	COQ4	O13525	335 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.58	□□□□□ -1.52	not detected
RSA1	YPL193W	CTS1	P29029	562 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	RDH54	P38086	958 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	DAK2	P43550	591 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	ROT1	Q03691	256 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	RKM2	Q03942	479 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	SGD1	Q06132	899 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	EST2	Q06163	884 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	RSB1	Q08417	382 aa		5.58	□□□□□ -1.52
RSA1	YPL193W	CYC1	P00044	109 aa	Predicted RBP	5.57	□□□□□ -1.52
RSA1	YPL193W	TUB2	P02557	457 aa	Known RBP	5.57	□□□□□ -1.52
RSA1	YPL193W	LAM1	P38851	1228 aa		5.57	□□□□□ -1.52
RSA1	YPL193W	OXR1	Q08952	273 aa		5.57	□□□□□ -1.52
RSA1	YPL193W	SPO21	Q12411	609 aa		5.57	□□□□□ -1.52
RSA1	YPL193W	PTC5	Q12511	572 aa		5.57	□□□□□ -1.52
RSA1	YPL193W	CCZ1	P38273	704 aa		5.56	□□□□□ -1.52
RSA1	YPL193W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.56	□□□□□ -1.52	not detected
RSA1	YPL193W	MEF2	P39677	819 aa		5.56	□□□□□ -1.52
RSA1	YPL193W	YDR132C	Q03900	495 aa		5.56	□□□□□ -1.52
RSA1	YPL193W	GSF2	Q04697	403 aa	Known RBP	5.56	□□□□□ -1.52
RSA1	YPL193W	MET4	P32389	672 aa		5.55	□□□□□ -1.52
RSA1	YPL193W	AFG2	P32794	780 aa		5.55	□□□□□ -1.52
RSA1	YPL193W	GCN5	Q03330	439 aa		5.55	□□□□□ -1.52
RSA1	YPL193W	ADI1	Q03677	179 aa		5.55	□□□□□ -1.52
RSA1	YPL193W	TAT2	P38967	592 aa		5.54	□□□□□ -1.52
RSA1	YPL193W	FAA3	P39002	694 aa		5.54	□□□□□ -1.52
RSA1	YPL193W	THI12	P42883	340 aa		5.54	□□□□□ -1.52
RSA1	YPL193W	THI5	P43534	340 aa		5.54	□□□□□ -1.52
RSA1	YPL193W	THI11	P47183	340 aa		5.54	□□□□□ -1.52
RSA1	YPL193W	HOS3	Q02959	697 aa	Known RBP	5.54	□□□□□ -1.52
RSA1	YPL193W	THI13	Q07748	340 aa		5.54	□□□□□ -1.52
RSA1	YPL193W	ALG3	P38179	458 aa		5.53	□□□□□ -1.52
RSA1	YPL193W	SEC26	P41810	973 aa	Known RBP	5.53	□□□□□ -1.52
RSA1	YPL193W	ENV11	P53246	860 aa		5.53	□□□□□ -1.52
RSA1	YPL193W	TNA1	P53322	534 aa		5.53	□□□□□ -1.52
RSA1	YPL193W	YPL109C	Q02981	657 aa		5.53	□□□□□ -1.52
RSA1	YPL193W	PLB2	Q03674	706 aa		5.52	□□□□□ -1.53
RSA1	YPL193W	PNS1	Q12412	539 aa		5.52	□□□□□ -1.53
RSA1	YPL193W	SEC23	P15303	768 aa	Known RBP	5.5	□□□□□ -1.53
RSA1	YPL193W	PIC2	P40035	300 aa		5.5	□□□□□ -1.53
RSA1	YPL193W	HNT2	P49775	206 aa		5.5	□□□□□ -1.53
RSA1	YPL193W	GIS1	Q03833	894 aa		5.5	□□□□□ -1.53
RSA1	YPL193W	CMP2	P14747	604 aa		5.49	□□□□□ -1.53
RSA1	YPL193W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms