RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	LAP2	Q10740	671 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	YBL113C	Q7M4S9	792 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	SWI1	P09547	1314 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	GAL1	P04385	528 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	MSN5	P52918	1224 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	RSM28	Q03430	361 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	SAS4	Q04003	481 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	GAD1	Q04792	585 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	ADE13	Q05911	482 aa	Known RBP	5.42	□□□□□ -1.54
PXA1	YPL147W	SMD2	Q06217	110 aa	Known RBP	5.42	□□□□□ -1.54
PXA1	YPL147W	YOR378W	Q08902	515 aa		5.42	□□□□□ -1.54
PXA1	YPL147W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
PXA1	YPL147W	PET494	P07390	489 aa	Predicted RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	RPC40	P07703	335 aa	Known RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	SRM1	P21827	482 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	SLA1	P32790	1244 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	SWD1	P39706	426 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	LAM5	P43560	674 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	RTC4	P53850	401 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	UBP10	P53874	792 aa	Predicted RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	MAG2	Q06436	670 aa	Known RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	HAA1	Q12753	694 aa	Known RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	GLK1	P17709	500 aa	Known RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	STO1	P34160	861 aa	Known RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	UGA2	P38067	497 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	SLX1	P38324	304 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	REI1	P38344	393 aa	Predicted RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	SPT8	P38915	602 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	GIM3	P53900	129 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	ALD6	P54115	500 aa	Known RBP	5.41	□□□□□ -1.54
PXA1	YPL147W	YPR097W	Q06839	1073 aa		5.41	□□□□□ -1.54
PXA1	YPL147W	ERG12	P07277	443 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	TPM1	P17536	199 aa	Known RBP	5.4	□□□□□ -1.54
PXA1	YPL147W	PET123	P17558	318 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	MGE1	P38523	228 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	PEX8	P53248	589 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	LSC1	P53598	329 aa	Known RBP	5.4	□□□□□ -1.54
PXA1	YPL147W	RPN4	Q03465	531 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	NOC3	Q07896	663 aa	Predicted RBP	5.4	□□□□□ -1.54
PXA1	YPL147W	YPL191C	Q08930	360 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	DPH6	Q12429	685 aa		5.4	□□□□□ -1.54
PXA1	YPL147W	RRP36	Q12481	300 aa	Predicted RBP	5.4	□□□□□ -1.54
PXA1	YPL147W	SEC8	P32855	1065 aa		5.4	□□□□□ -1.55
PXA1	YPL147W	SMY2	P32909	740 aa	Known RBP	5.4	□□□□□ -1.55
PXA1	YPL147W	RSM7	P47150	247 aa		5.4	□□□□□ -1.55
PXA1	YPL147W	YNL144C	P53907	740 aa		5.4	□□□□□ -1.55
PXA1	YPL147W	UTP13	Q05946	817 aa	Known RBP	5.4	□□□□□ -1.55
PXA1	YPL147W	YDL073W	Q07454	984 aa		5.4	□□□□□ -1.55
PXA1	YPL147W	MSC6	Q08818	692 aa	Known RBP	5.4	□□□□□ -1.55
PXA1	YPL147W	YMR084W	A2P2R3	262 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	NTG1	P31378	399 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	VMA8	P32610	256 aa	Known RBP	5.39	□□□□□ -1.55
PXA1	YPL147W	RPG1	P38249	964 aa	Known RBP	5.39	□□□□□ -1.55
PXA1	YPL147W	YLF2	P38746	405 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	IML2	P47031	731 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	PTA1	Q01329	785 aa	Predicted RBP	5.39	□□□□□ -1.55
PXA1	YPL147W	ECM11	Q04110	302 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	TIF1	P10081	395 aa	Known RBP	5.39	□□□□□ -1.55
PXA1	YPL147W	TIF3	P34167	436 aa	Known RBP	5.39	□□□□□ -1.55
PXA1	YPL147W	YKL222C	P35995	705 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	MIC60	P36112	540 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	YHR219W	P38900	624 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	RTT105	P40063	208 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	IAH1	P41734	238 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	RET2	P43621	546 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	YDR286C	Q05530	114 aa		5.39	□□□□□ -1.55
PXA1	YPL147W	SES1	P07284	462 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	KAR2	P16474	682 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	FAR1	P21268	830 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	STE11	P23561	717 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	ECM32	P32644	1121 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	PSY4	P38193	441 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	SPC72	P39723	622 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	FMP10	P40098	244 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	SAE2	P46946	345 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	TRF5	P48561	642 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	RAD17	P48581	401 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	ERB1	Q04660	807 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	ESC8	Q08119	714 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	ATE1	P16639	503 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	DIT2	P21595	489 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	MSH2	P25847	964 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	DAL80	P26343	269 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	MRPL40	P36534	297 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	ATG14	P38270	344 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	HSM3	P38348	480 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	LAM1	P38851	1228 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	YRB1	P41920	201 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	SSQ1	Q05931	657 aa	Predicted RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	MCP2	Q06567	569 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	GIC2	Q06648	383 aa		5.38	□□□□□ -1.55
PXA1	YPL147W	RIO1	Q12196	484 aa	Known RBP	5.38	□□□□□ -1.55
PXA1	YPL147W	LEU1	P07264	779 aa	Known RBP	5.37	□□□□□ -1.55
PXA1	YPL147W	RAD16	P31244	790 aa		5.37	□□□□□ -1.55
PXA1	YPL147W	RTG3	P38165	486 aa		5.37	□□□□□ -1.55
PXA1	YPL147W	YBL086C	P38177	466 aa		5.37	□□□□□ -1.55
PXA1	YPL147W	YPP1	P46951	817 aa		5.37	□□□□□ -1.55
PXA1	YPL147W	ENT3	P47160	408 aa		5.37	□□□□□ -1.55
PXA1	YPL147W	HST1	P53685	503 aa		5.37	□□□□□ -1.55
PXA1	YPL147W	NCS2	P53923	493 aa	Predicted RBP	5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 173.6 ms