RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W YKL069WP36088 180 aa4.32□□□□□ -1.72
SRL1YOR247W PGM2P37012 569 aaKnown RBP4.32□□□□□ -1.72
SRL1YOR247W RDH54P38086 958 aa4.32□□□□□ -1.72
SRL1YOR247W NUP82P40368 713 aa4.32□□□□□ -1.72
SRL1YOR247W YGR125WP53273 1036 aa4.32□□□□□ -1.72
SRL1YOR247W YNR065CP53751 1116 aa4.32□□□□□ -1.72
SRL1YOR247W GIS4Q04233 774 aa4.32□□□□□ -1.72
SRL1YOR247W EST2Q06163 884 aa4.32□□□□□ -1.72
SRL1YOR247W FLC1Q08967 793 aa4.32□□□□□ -1.72
SRL1YOR247W YLR125WQ12138 136 aa4.32□□□□□ -1.72
SRL1YOR247W GAL11P19659 1081 aa4.31□□□□□ -1.72
SRL1YOR247W NAR1P23503 491 aaKnown RBP4.31□□□□□ -1.72
SRL1YOR247W PIN4P34217 668 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
SRL1YOR247W ADD66P36040 267 aa4.31□□□□□ -1.72
SRL1YOR247W ARL1P38116 183 aaKnown RBP4.31□□□□□ -1.72
SRL1YOR247W PBY1P38254 753 aa4.31□□□□□ -1.72
SRL1YOR247W AMN1P38285 549 aaPredicted RBP4.31□□□□□ -1.72
SRL1YOR247W EXO5P38289 585 aa4.31□□□□□ -1.72
SRL1YOR247W YBR184WP38299 523 aa4.31□□□□□ -1.72
SRL1YOR247W NEO1P40527 1151 aa4.31□□□□□ -1.72
SRL1YOR247W LSB6P42951 607 aa4.31□□□□□ -1.72
SRL1YOR247W ERP6P53198 216 aa4.31□□□□□ -1.72
SRL1YOR247W UTP22P53254 1237 aaPredicted RBP4.31□□□□□ -1.72
SRL1YOR247W PHO8P11491 566 aa4.3□□□□□ -1.72
SRL1YOR247W SYP1P25623 870 aaKnown RBP4.3□□□□□ -1.72
SRL1YOR247W HXT13P39924 564 aa4.3□□□□□ -1.72
SRL1YOR247W RSP5P39940 809 aaKnown RBP4.3□□□□□ -1.72
SRL1YOR247W HUL4P40985 892 aa4.3□□□□□ -1.72
SRL1YOR247W HXT17P53631 564 aa4.3□□□□□ -1.72
SRL1YOR247W HXT15P54854 567 aa4.3□□□□□ -1.72
SRL1YOR247W ROD1Q02805 837 aa4.3□□□□□ -1.72
SRL1YOR247W EAF1Q06337 982 aa4.3□□□□□ -1.72
SRL1YOR247W YIG1Q08956 461 aa4.3□□□□□ -1.72
SRL1YOR247W YLL054CQ12244 843 aa4.3□□□□□ -1.72
SRL1YOR247W RKM4Q12504 494 aa4.3□□□□□ -1.72
SRL1YOR247W YGR161W-CQ3E744 92 aa4.3□□□□□ -1.72
SRL1YOR247W CIT1P00890 479 aa4.29□□□□□ -1.72
SRL1YOR247W DED1P06634 604 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W SBP1P10080 294 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W HEM13P11353 328 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W PRP9P19736 530 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W ARE1P25628 610 aa4.29□□□□□ -1.72
SRL1YOR247W MKK2P32491 506 aa4.29□□□□□ -1.72
SRL1YOR247W TFA2P36145 328 aa4.29□□□□□ -1.72
SRL1YOR247W VBA5P36172 582 aa4.29□□□□□ -1.72
SRL1YOR247W YHR020WP38708 688 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W SKN7P38889 622 aa4.29□□□□□ -1.72
SRL1YOR247W MNN1P39106 762 aa4.29□□□□□ -1.72
SRL1YOR247W YGL081WP53156 320 aa4.29□□□□□ -1.72
SRL1YOR247W HAS1Q03532 505 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W SPO71Q03868 1245 aa4.29□□□□□ -1.72
SRL1YOR247W RKM2Q03942 479 aa4.29□□□□□ -1.72
SRL1YOR247W YLR225CQ05948 407 aaKnown RBP4.29□□□□□ -1.72
SRL1YOR247W RPL8BP29453 256 aaKnown RBP4.28□□□□□ -1.72
SRL1YOR247W THI4P32318 326 aa4.28□□□□□ -1.72
SRL1YOR247W ABD1P32783 436 aaPredicted RBP4.28□□□□□ -1.72
SRL1YOR247W TIM23P32897 222 aa4.28□□□□□ -1.72
SRL1YOR247W STE5P32917 917 aa4.28□□□□□ -1.72
SRL1YOR247W SEA4P38164 1038 aa4.28□□□□□ -1.72
SRL1YOR247W MSH4P40965 878 aaPredicted RBP4.28□□□□□ -1.72
SRL1YOR247W LSB3P43603 459 aaKnown RBP4.28□□□□□ -1.72
SRL1YOR247W CNN1P43618 361 aa4.28□□□□□ -1.72
SRL1YOR247W GCV1P48015 400 aa4.28□□□□□ -1.72
SRL1YOR247W MEC3Q02574 474 aa4.28□□□□□ -1.72
SRL1YOR247W UTP5Q04177 643 aaKnown RBP4.28□□□□□ -1.72
SRL1YOR247W FMP25Q08023 583 aa4.28□□□□□ -1.72
SRL1YOR247W PPM2Q08282 695 aa4.28□□□□□ -1.72
SRL1YOR247W LAP2Q10740 671 aa4.28□□□□□ -1.72
SRL1YOR247W REC8Q12188 680 aa4.28□□□□□ -1.72
SRL1YOR247W TY1A-LR4P0C2I8 440 aaKnown RBP4.27□□□□□ -1.73
SRL1YOR247W TY1A-DR6P0CX70 440 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-ER1P0CX71 440 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-LR2P0CX72 440 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-PLP0CX73 440 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-JR1P0CX74 440 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-LR3P0CX75 440 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-ML2P0CX76 440 aa4.27□□□□□ -1.73
SRL1YOR247W INO1P11986 533 aa4.27□□□□□ -1.73
SRL1YOR247W DBP5P20449 482 aaKnown RBP4.27□□□□□ -1.73
SRL1YOR247W YKL107WP34251 309 aa4.27□□□□□ -1.73
SRL1YOR247W TAT1P38085 619 aa4.27□□□□□ -1.73
SRL1YOR247W HSE1P38753 452 aa4.27□□□□□ -1.73
SRL1YOR247W SLS1P42900 643 aa4.27□□□□□ -1.73
SRL1YOR247W UTP8P53276 713 aaKnown RBP4.27□□□□□ -1.73
SRL1YOR247W SOK2P53438 785 aaPredicted RBP4.27□□□□□ -1.73
SRL1YOR247W TIF35Q04067 274 aaKnown RBP4.27□□□□□ -1.73
SRL1YOR247W TY1A-GR1Q12085 440 aa4.27□□□□□ -1.73
SRL1YOR247W YDR215CQ12240 137 aa4.27□□□□□ -1.73
SRL1YOR247W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.27□□□□□ -1.73
SRL1YOR247W TY1A-OLQ92392 440 aaKnown RBP4.27□□□□□ -1.73
SRL1YOR247W MRP10O75012 95 aa4.26□□□□□ -1.73
SRL1YOR247W CAN1P04817 590 aa4.26□□□□□ -1.73
SRL1YOR247W MCM7P38132 845 aa4.26□□□□□ -1.73
SRL1YOR247W REI1P38344 393 aaPredicted RBP4.26□□□□□ -1.73
SRL1YOR247W NEM1P38757 446 aa4.26□□□□□ -1.73
SRL1YOR247W GIP2P40036 548 aa4.26□□□□□ -1.73
SRL1YOR247W HNT2P49775 206 aa4.26□□□□□ -1.73
SRL1YOR247W TPO2P53283 614 aa4.26□□□□□ -1.73
SRL1YOR247W DSE4P53753 1117 aa4.26□□□□□ -1.73
SRL1YOR247W SAC7P17121 654 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 96.9 ms