RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C TRS120Q04183 1289 aa8.02□□□□□ -1.13
TSR3YOR006C AOS1Q06624 347 aa8.02□□□□□ -1.13
TSR3YOR006C NAB2P32505 525 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
TSR3YOR006C SLD2P34252 453 aa8.01□□□□□ -1.13
TSR3YOR006C RGD2P43556 714 aa8.01□□□□□ -1.13
TSR3YOR006C RSC2Q06488 889 aa8.01□□□□□ -1.13
TSR3YOR006C NUP145P49687 1317 aa8.01□□□□□ -1.13
TSR3YOR006C GPM1P00950 247 aaKnown RBP8□□□□□ -1.13
TSR3YOR006C IRS4P36115 615 aaKnown RBP8□□□□□ -1.13
TSR3YOR006C AIM46P38885 310 aa8□□□□□ -1.13
TSR3YOR006C YIL165CP40446 119 aa8□□□□□ -1.13
TSR3YOR006C KNS1P32350 737 aaPredicted RBP7.99□□□□□ -1.13
TSR3YOR006C YML020WQ03722 664 aa7.99□□□□□ -1.13
TSR3YOR006C PSY2P40164 858 aa7.98□□□□□ -1.13
TSR3YOR006C UTP22P53254 1237 aaPredicted RBP7.98□□□□□ -1.13
TSR3YOR006C RIM15P43565 1770 aa7.97□□□□□ -1.13
TSR3YOR006C IDI1P15496 288 aa7.97□□□□□ -1.13
TSR3YOR006C PDC5P16467 563 aaKnown RBP7.97□□□□□ -1.13
TSR3YOR006C KCC4P25389 1037 aa7.97□□□□□ -1.13
TSR3YOR006C YHL050CP38721 697 aa7.97□□□□□ -1.13
TSR3YOR006C YHR219WP38900 624 aa7.97□□□□□ -1.13
TSR3YOR006C PRK1P40494 810 aa7.97□□□□□ -1.13
TSR3YOR006C NUT2Q06213 157 aa7.97□□□□□ -1.13
TSR3YOR006C TIF6Q12522 245 aaKnown RBP7.97□□□□□ -1.13
TSR3YOR006C SEC20P28791 383 aa7.96□□□□□ -1.14
TSR3YOR006C RMT2Q03305 412 aa7.96□□□□□ -1.14
TSR3YOR006C EMG1Q06287 252 aaKnown RBP7.96□□□□□ -1.14
TSR3YOR006C AI1P03875 834 aa7.95□□□□□ -1.14
TSR3YOR006C RTR1P40084 226 aaPredicted RBP7.95□□□□□ -1.14
TSR3YOR006C SAP155P43612 1002 aa7.95□□□□□ -1.14
TSR3YOR006C YNL011CP53980 444 aa7.95□□□□□ -1.14
TSR3YOR006C RSC4Q02206 625 aa7.95□□□□□ -1.14
TSR3YOR006C NOP8Q08287 484 aaPredicted RBP7.95□□□□□ -1.14
TSR3YOR006C PPT1P53043 513 aa7.94□□□□□ -1.14
TSR3YOR006C RRP46P53256 223 aaPredicted RBP7.94□□□□□ -1.14
TSR3YOR006C MSC6Q08818 692 aaKnown RBP7.94□□□□□ -1.14
TSR3YOR006C FRT1Q99332 602 aa7.94□□□□□ -1.14
TSR3YOR006C MET1P36150 593 aa7.93□□□□□ -1.14
TSR3YOR006C TOS1P38288 455 aa7.93□□□□□ -1.14
TSR3YOR006C PPX1P38698 397 aa7.93□□□□□ -1.14
TSR3YOR006C MDG1P53885 366 aa7.93□□□□□ -1.14
TSR3YOR006C CDC55Q00362 526 aa7.93□□□□□ -1.14
TSR3YOR006C IOC4Q04213 475 aa7.93□□□□□ -1.14
TSR3YOR006C NSE3Q05541 303 aa7.93□□□□□ -1.14
TSR3YOR006C ALE1Q08548 619 aa7.93□□□□□ -1.14
TSR3YOR006C RRT14P40470 206 aa7.92□□□□□ -1.14
TSR3YOR006C BUD27P43573 796 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
TSR3YOR006C YNL050CP53952 270 aa7.92□□□□□ -1.14
TSR3YOR006C MNL2Q12205 849 aa7.92□□□□□ -1.14
TSR3YOR006C PRD1P25375 712 aa7.91□□□□□ -1.14
TSR3YOR006C SEN54Q02825 467 aaPredicted RBP7.9□□□□□ -1.14
TSR3YOR006C BSC2Q05611 235 aa7.9□□□□□ -1.14
TSR3YOR006C NYV1Q12255 253 aa7.9□□□□□ -1.14
TSR3YOR006C SER1P33330 395 aaKnown RBP7.89□□□□□ -1.15
TSR3YOR006C ZDS1P50111 915 aaKnown RBP7.89□□□□□ -1.15
TSR3YOR006C SSP2Q08646 371 aa7.89□□□□□ -1.15
TSR3YOR006C PHM7Q12252 991 aa7.89□□□□□ -1.15
TSR3YOR006C FUS1P11710 512 aa7.88□□□□□ -1.15
TSR3YOR006C ECM2P38241 364 aaKnown RBP7.88□□□□□ -1.15
TSR3YOR006C YFR016CP43597 1233 aaKnown RBP7.88□□□□□ -1.15
TSR3YOR006C EAF6P47128 113 aa7.88□□□□□ -1.15
TSR3YOR006C SAM37P50110 327 aa7.88□□□□□ -1.15
TSR3YOR006C RIX7Q07844 837 aaKnown RBP7.88□□□□□ -1.15
TSR3YOR006C CTI6Q08923 506 aa7.88□□□□□ -1.15
TSR3YOR006C LPD1P09624 499 aaKnown RBP7.87□□□□□ -1.15
TSR3YOR006C YKL222CP35995 705 aa7.87□□□□□ -1.15
TSR3YOR006C MAM1P40065 302 aa7.87□□□□□ -1.15
TSR3YOR006C YNR014WP53719 212 aa7.87□□□□□ -1.15
TSR3YOR006C SLP1Q12232 587 aa7.87□□□□□ -1.15
TSR3YOR006C CTT1P06115 562 aa7.86□□□□□ -1.15
TSR3YOR006C ALG14P38242 237 aa7.86□□□□□ -1.15
TSR3YOR006C INP51P40559 946 aaKnown RBP7.86□□□□□ -1.15
TSR3YOR006C MPP10P47083 593 aaKnown RBP7.86□□□□□ -1.15
TSR3YOR006C YGL082WP53155 381 aa7.86□□□□□ -1.15
TSR3YOR006C GIS4Q04233 774 aa7.86□□□□□ -1.15
TSR3YOR006C GPI13Q07830 1017 aa7.86□□□□□ -1.15
TSR3YOR006C THI72Q08579 599 aa7.86□□□□□ -1.15
TSR3YOR006C NHA1Q99271 985 aa7.86□□□□□ -1.15
TSR3YOR006C PYC2P32327 1180 aaKnown RBP7.85□□□□□ -1.15
TSR3YOR006C PGM2P37012 569 aaKnown RBP7.85□□□□□ -1.15
TSR3YOR006C BOI2P39969 1040 aa7.85□□□□□ -1.15
TSR3YOR006C RAT1Q02792 1006 aaKnown RBP7.85□□□□□ -1.15
TSR3YOR006C YDL144CQ07589 356 aa7.85□□□□□ -1.15
TSR3YOR006C BMS1Q08965 1183 aaKnown RBP7.85□□□□□ -1.15
TSR3YOR006C LYS2P07702 1392 aa7.84□□□□□ -1.15
TSR3YOR006C MRP10O75012 95 aa7.84□□□□□ -1.15
TSR3YOR006C NAR1P23503 491 aaKnown RBP7.84□□□□□ -1.15
TSR3YOR006C GCD6P32501 712 aaKnown RBP7.84□□□□□ -1.15
TSR3YOR006C BIO5P53744 561 aaKnown RBP7.84□□□□□ -1.15
TSR3YOR006C NSG2P53898 299 aa7.84□□□□□ -1.15
TSR3YOR006C THI22Q06490 572 aa7.84□□□□□ -1.15
TSR3YOR006C NOC3Q07896 663 aaPredicted RBP7.84□□□□□ -1.15
TSR3YOR006C COQ4O13525 335 aa7.83□□□□□ -1.16
TSR3YOR006C ERT1P38140 529 aa7.83□□□□□ -1.16
TSR3YOR006C YHL008CP38750 627 aa7.83□□□□□ -1.16
TSR3YOR006C CIC1P38779 376 aaKnown RBP7.83□□□□□ -1.16
TSR3YOR006C LEM3P42838 414 aa7.83□□□□□ -1.16
TSR3YOR006C GYP7P48365 746 aa7.83□□□□□ -1.16
TSR3YOR006C GUP1P53154 560 aa7.83□□□□□ -1.16
TSR3YOR006C SOG2Q08817 791 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms