RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C AIM21P40563 679 aa2.32□□□□□ -2.04
SFB2YNL049C ALA1P40825 983 aaKnown RBP2.32□□□□□ -2.04
SFB2YNL049C RGD2P43556 714 aa2.32□□□□□ -2.04
SFB2YNL049C SAM37P50110 327 aa2.32□□□□□ -2.04
SFB2YNL049C UTP4Q06679 776 aaKnown RBP2.32□□□□□ -2.04
SFB2YNL049C PHM7Q12252 991 aa2.32□□□□□ -2.04
SFB2YNL049C NAB2P32505 525 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SFB2YNL049C PEP7P32609 515 aa2.31□□□□□ -2.04
SFB2YNL049C RAD55P38953 406 aa2.31□□□□□ -2.04
SFB2YNL049C VAC8P39968 578 aa2.31□□□□□ -2.04
SFB2YNL049C JJJ2P46997 583 aa2.31□□□□□ -2.04
SFB2YNL049C NNF1P47149 201 aa2.31□□□□□ -2.04
SFB2YNL049C NRD1P53617 575 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SFB2YNL049C RCM1P53972 490 aa2.31□□□□□ -2.04
SFB2YNL049C ALD6P54115 500 aaKnown RBP2.31□□□□□ -2.04
SFB2YNL049C DYS1P38791 387 aa2.31□□□□□ -2.04
SFB2YNL049C FAA3P39002 694 aa2.31□□□□□ -2.04
SFB2YNL049C AAD14P42884 376 aa2.31□□□□□ -2.04
SFB2YNL049C LSB3P43603 459 aaKnown RBP2.31□□□□□ -2.04
SFB2YNL049C VPS16Q03308 798 aa2.31□□□□□ -2.04
SFB2YNL049C TAF8Q03750 510 aa2.31□□□□□ -2.04
SFB2YNL049C BSC2Q05611 235 aa2.31□□□□□ -2.04
SFB2YNL049C NOC3Q07896 663 aaPredicted RBP2.31□□□□□ -2.04
SFB2YNL049C PMD1P32634 1753 aa2.3□□□□□ -2.04
SFB2YNL049C CYC8P14922 966 aa2.3□□□□□ -2.04
SFB2YNL049C UGA3P26370 528 aa2.3□□□□□ -2.04
SFB2YNL049C PEA2P40091 420 aa2.3□□□□□ -2.04
SFB2YNL049C NTA1P40354 457 aa2.3□□□□□ -2.04
SFB2YNL049C YGR035CP53222 116 aa2.3□□□□□ -2.04
SFB2YNL049C YGR122WP53272 402 aa2.3□□□□□ -2.04
SFB2YNL049C HST3P53687 447 aa2.3□□□□□ -2.04
SFB2YNL049C ATG13Q06628 738 aa2.3□□□□□ -2.04
SFB2YNL049C PIN2Q12057 282 aa2.3□□□□□ -2.04
SFB2YNL049C TY1A-DR3Q12441 440 aa2.3□□□□□ -2.04
SFB2YNL049C HXK1P04806 485 aaKnown RBP2.3□□□□□ -2.04
SFB2YNL049C IRE1P32361 1115 aa2.3□□□□□ -2.04
SFB2YNL049C KAP122P32767 1081 aa2.3□□□□□ -2.04
SFB2YNL049C DLD1P32891 587 aa2.3□□□□□ -2.04
SFB2YNL049C IRS4P36115 615 aaKnown RBP2.3□□□□□ -2.04
SFB2YNL049C CIC1P38779 376 aaKnown RBP2.3□□□□□ -2.04
SFB2YNL049C PSY2P40164 858 aa2.3□□□□□ -2.04
SFB2YNL049C CRF1Q04930 467 aa2.3□□□□□ -2.04
SFB2YNL049C INP54Q08227 384 aaKnown RBP2.3□□□□□ -2.04
SFB2YNL049C ARG82P07250 355 aa2.29□□□□□ -2.04
SFB2YNL049C RAD2P07276 1031 aa2.29□□□□□ -2.04
SFB2YNL049C RPC31P17890 251 aa2.29□□□□□ -2.04
SFB2YNL049C AFT1P22149 690 aa2.29□□□□□ -2.04
SFB2YNL049C SLA1P32790 1244 aa2.29□□□□□ -2.04
SFB2YNL049C FIR1P40020 876 aa2.29□□□□□ -2.04
SFB2YNL049C MAD1P40957 749 aa2.29□□□□□ -2.04
SFB2YNL049C YNR014WP53719 212 aa2.29□□□□□ -2.04
SFB2YNL049C RMD1Q03441 430 aa2.29□□□□□ -2.04
SFB2YNL049C DAL4Q04895 635 aa2.29□□□□□ -2.04
SFB2YNL049C ESF1Q06344 628 aaKnown RBP2.29□□□□□ -2.04
SFB2YNL049C OXR1Q08952 273 aa2.29□□□□□ -2.04
SFB2YNL049C FLP1P03870 423 aa2.29□□□□□ -2.04
SFB2YNL049C PDC6P26263 563 aaKnown RBP2.29□□□□□ -2.04
SFB2YNL049C UGA4P32837 571 aa2.29□□□□□ -2.04
SFB2YNL049C MTO1P53070 669 aa2.29□□□□□ -2.04
SFB2YNL049C SQS1P53866 767 aaKnown RBP2.29□□□□□ -2.04
SFB2YNL049C ADE16P54113 591 aaKnown RBP2.29□□□□□ -2.04
SFB2YNL049C CTR9P89105 1077 aa2.29□□□□□ -2.04
SFB2YNL049C ECM30Q06673 1274 aa2.29□□□□□ -2.04
SFB2YNL049C PSH1Q12161 406 aa2.29□□□□□ -2.04
SFB2YNL049C YOL098CQ12496 1037 aa2.29□□□□□ -2.04
SFB2YNL049C PET112P33893 541 aa2.28□□□□□ -2.04
SFB2YNL049C ISW1P38144 1129 aa2.28□□□□□ -2.04
SFB2YNL049C GIP1P38229 639 aa2.28□□□□□ -2.04
SFB2YNL049C YHL008CP38750 627 aa2.28□□□□□ -2.04
SFB2YNL049C YTA6P40328 754 aa2.28□□□□□ -2.04
SFB2YNL049C PTK2P47116 818 aaKnown RBP2.28□□□□□ -2.04
SFB2YNL049C YOR296WQ08748 1289 aa2.28□□□□□ -2.04
SFB2YNL049C PSF3Q12146 194 aa2.28□□□□□ -2.04
SFB2YNL049C MSM1P22438 575 aa2.28□□□□□ -2.04
SFB2YNL049C DAL1P32375 460 aa2.28□□□□□ -2.04
SFB2YNL049C DUR3P33413 735 aa2.28□□□□□ -2.04
SFB2YNL049C AHP1P38013 176 aaKnown RBP2.28□□□□□ -2.04
SFB2YNL049C IOC3P43596 787 aa2.28□□□□□ -2.04
SFB2YNL049C YJR115WP47152 169 aa2.28□□□□□ -2.04
SFB2YNL049C CUS1Q02554 436 aaPredicted RBP2.28□□□□□ -2.04
SFB2YNL049C YCS4Q06156 1176 aa2.28□□□□□ -2.04
SFB2YNL049C EMG1Q06287 252 aaKnown RBP2.28□□□□□ -2.04
SFB2YNL049C SSF2Q12153 453 aaPredicted RBP2.28□□□□□ -2.04
SFB2YNL049C NUP145P49687 1317 aa2.28□□□□□ -2.05
SFB2YNL049C TUS1Q06412 1307 aa2.28□□□□□ -2.05
SFB2YNL049C AUS1Q08409 1394 aa2.27□□□□□ -2.05
SFB2YNL049C LEU1P07264 779 aaKnown RBP2.27□□□□□ -2.05
SFB2YNL049C CLN2P20438 545 aa2.27□□□□□ -2.05
SFB2YNL049C SPE2P21182 396 aa2.27□□□□□ -2.05
SFB2YNL049C OSM1P21375 501 aaKnown RBP2.27□□□□□ -2.05
SFB2YNL049C PRE9P23638 258 aaKnown RBP2.27□□□□□ -2.05
SFB2YNL049C MCM5P29496 775 aaKnown RBP2.27□□□□□ -2.05
SFB2YNL049C YJR098CP47139 656 aa2.27□□□□□ -2.05
SFB2YNL049C MON1P53129 644 aa2.27□□□□□ -2.05
SFB2YNL049C FPR4Q06205 392 aaPredicted RBP2.27□□□□□ -2.05
SFB2YNL049C MNR2P35724 969 aa2.27□□□□□ -2.05
SFB2YNL049C APE3P37302 537 aaKnown RBP2.27□□□□□ -2.05
SFB2YNL049C AIM46P38885 310 aa2.27□□□□□ -2.05
SFB2YNL049C ACO2P39533 789 aa2.27□□□□□ -2.05
SFB2YNL049C ITC1P53125 1264 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms