RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C ELA1P53861 379 aaPredicted RBP5.43□□□□□ -1.54
SSO2YMR183C ADI1Q03677 179 aa5.43□□□□□ -1.54
SSO2YMR183C VMA4P22203 233 aaKnown RBP5.42□□□□□ -1.54
SSO2YMR183C SMY2P32909 740 aaKnown RBP5.42□□□□□ -1.54
SSO2YMR183C NNK1P36003 928 aa5.42□□□□□ -1.54
SSO2YMR183C PEX28P38848 579 aa5.42□□□□□ -1.54
SSO2YMR183C FAA3P39002 694 aa5.42□□□□□ -1.54
SSO2YMR183C NSI1Q12457 570 aa5.42□□□□□ -1.54
SSO2YMR183C NFS1P25374 497 aa5.41□□□□□ -1.54
SSO2YMR183C SNU71P53207 620 aaKnown RBP5.41□□□□□ -1.54
SSO2YMR183C RCM1P53972 490 aa5.41□□□□□ -1.54
SSO2YMR183C UTP5Q04177 643 aaKnown RBP5.41□□□□□ -1.54
SSO2YMR183C DFG16Q99234 619 aa5.41□□□□□ -1.54
SSO2YMR183C GAS1P22146 559 aaKnown RBP5.4□□□□□ -1.54
SSO2YMR183C HEM3P28789 327 aa5.4□□□□□ -1.54
SSO2YMR183C MGE1P38523 228 aa5.4□□□□□ -1.54
SSO2YMR183C YAR028WP39548 234 aa5.4□□□□□ -1.54
SSO2YMR183C POL32P47110 350 aa5.4□□□□□ -1.54
SSO2YMR183C PRP43P53131 767 aaKnown RBP5.4□□□□□ -1.54
SSO2YMR183C YGR122WP53272 402 aa5.4□□□□□ -1.54
SSO2YMR183C GCD1P09032 578 aaPredicted RBP5.39□□□□□ -1.55
SSO2YMR183C RDH54P38086 958 aa5.39□□□□□ -1.55
SSO2YMR183C OYE3P41816 400 aaPredicted RBP5.39□□□□□ -1.55
SSO2YMR183C XKS1P42826 600 aa5.39□□□□□ -1.55
SSO2YMR183C YGL140CP53120 1219 aa5.39□□□□□ -1.55
SSO2YMR183C EAR1Q03212 550 aa5.39□□□□□ -1.55
SSO2YMR183C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55 RIP-Chip
SSO2YMR183C SEC23P15303 768 aaKnown RBP5.38□□□□□ -1.55
SSO2YMR183C HSE1P38753 452 aa5.38□□□□□ -1.55
SSO2YMR183C LAP2Q10740 671 aa5.38□□□□□ -1.55
SSO2YMR183C MCD1Q12158 566 aa5.38□□□□□ -1.55
SSO2YMR183C ATE1P16639 503 aa5.37□□□□□ -1.55
SSO2YMR183C ATG14P38270 344 aa5.37□□□□□ -1.55
SSO2YMR183C PIC2P40035 300 aa5.37□□□□□ -1.55
SSO2YMR183C MRPS18P42847 217 aa5.37□□□□□ -1.55
SSO2YMR183C RKM2Q03942 479 aa5.37□□□□□ -1.55
SSO2YMR183C RRP15Q06511 250 aaPredicted RBP5.37□□□□□ -1.55
SSO2YMR183C YVC1Q12324 675 aa5.37□□□□□ -1.55
SSO2YMR183C HEM13P11353 328 aaKnown RBP5.36□□□□□ -1.55
SSO2YMR183C TAF13P11747 167 aa5.36□□□□□ -1.55
SSO2YMR183C RET1P22276 1149 aaKnown RBP5.36□□□□□ -1.55
SSO2YMR183C PRE9P23638 258 aaKnown RBP5.36□□□□□ -1.55
SSO2YMR183C ADD66P36040 267 aa5.36□□□□□ -1.55
SSO2YMR183C MET10P39692 1035 aa5.36□□□□□ -1.55
SSO2YMR183C YJR107WP47145 328 aa5.36□□□□□ -1.55
SSO2YMR183C PUS7Q08647 676 aaKnown RBP5.36□□□□□ -1.55
SSO2YMR183C RAD2P07276 1031 aa5.35□□□□□ -1.55
SSO2YMR183C CYC8P14922 966 aa5.35□□□□□ -1.55
SSO2YMR183C TPP1Q03796 238 aa5.35□□□□□ -1.55
SSO2YMR183C RSA3Q05942 220 aaKnown RBP5.35□□□□□ -1.55
SSO2YMR183C YLR257WQ06146 321 aaKnown RBP5.35□□□□□ -1.55
SSO2YMR183C TRE1Q08919 783 aa5.35□□□□□ -1.55
SSO2YMR183C ASF1P32447 279 aa5.34□□□□□ -1.55
SSO2YMR183C RPS26AP39938 119 aaKnown RBP5.34□□□□□ -1.55
SSO2YMR183C RPS26BP39939 119 aaKnown RBP5.34□□□□□ -1.55
SSO2YMR183C YNR063WP53749 607 aa5.34□□□□□ -1.55
SSO2YMR183C EST2Q06163 884 aa5.34□□□□□ -1.55
SSO2YMR183C HRK1Q08732 759 aaKnown RBP5.34□□□□□ -1.55
SSO2YMR183C ADP1P25371 1049 aa5.33□□□□□ -1.56
SSO2YMR183C MCM2P29469 868 aa5.33□□□□□ -1.56
SSO2YMR183C PEX7P39108 375 aa5.33□□□□□ -1.56
SSO2YMR183C VPS53P47061 822 aa5.33□□□□□ -1.56
SSO2YMR183C CDA2Q06703 312 aa5.33□□□□□ -1.56
SSO2YMR183C QNS1P38795 714 aaKnown RBP5.32□□□□□ -1.56
SSO2YMR183C PRO1P32264 428 aa5.31□□□□□ -1.56
SSO2YMR183C TSA1P34760 196 aaKnown RBP5.31□□□□□ -1.56
SSO2YMR183C PAM1P37304 830 aaKnown RBP5.31□□□□□ -1.56
SSO2YMR183C SSY1Q03770 852 aa5.31□□□□□ -1.56
SSO2YMR183C AFG2P32794 780 aa5.3□□□□□ -1.56
SSO2YMR183C SEC8P32855 1065 aa5.3□□□□□ -1.56
SSO2YMR183C THI80P35202 319 aa5.3□□□□□ -1.56
SSO2YMR183C YHL012WP38709 493 aa5.3□□□□□ -1.56
SSO2YMR183C NMD3P38861 518 aaKnown RBP5.3□□□□□ -1.56
SSO2YMR183C FYV10P40492 516 aa5.3□□□□□ -1.56
SSO2YMR183C ENT3P47160 408 aa5.3□□□□□ -1.56
SSO2YMR183C ORC3P54790 616 aa5.3□□□□□ -1.56
SSO2YMR183C HDA2Q06629 674 aa5.3□□□□□ -1.56
SSO2YMR183C MDL2P33311 773 aa5.29□□□□□ -1.56
SSO2YMR183C HSP78P33416 811 aa5.29□□□□□ -1.56
SSO2YMR183C PTC7P38797 343 aa5.29□□□□□ -1.56
SSO2YMR183C YJL045WP47052 634 aa5.29□□□□□ -1.56
SSO2YMR183C SIW14P53965 281 aa5.29□□□□□ -1.56
SSO2YMR183C SPR28Q04921 423 aa5.29□□□□□ -1.56
SSO2YMR183C ESF1Q06344 628 aaKnown RBP5.29□□□□□ -1.56
SSO2YMR183C DED1P06634 604 aaKnown RBP5.28□□□□□ -1.56
SSO2YMR183C SAM35P14693 329 aa5.28□□□□□ -1.56
SSO2YMR183C RMD1Q03441 430 aa5.28□□□□□ -1.56
SSO2YMR183C LPX1Q12405 387 aaKnown RBP5.28□□□□□ -1.56
SSO2YMR183C PTC5Q12511 572 aa5.28□□□□□ -1.56
SSO2YMR183C GTS1P40956 396 aa5.27□□□□□ -1.57
SSO2YMR183C GNP1P48813 663 aa5.27□□□□□ -1.57
SSO2YMR183C ROD1Q02805 837 aa5.27□□□□□ -1.57
SSO2YMR183C YTA7P40340 1379 aa5.27□□□□□ -1.57
SSO2YMR183C GCR1P07261 785 aa5.26□□□□□ -1.57
SSO2YMR183C SRO9P25567 434 aaKnown RBP5.26□□□□□ -1.57
SSO2YMR183C KIP1P28742 1111 aa5.26□□□□□ -1.57
SSO2YMR183C YSC84P32793 468 aa5.26□□□□□ -1.57
SSO2YMR183C ALG3P38179 458 aa5.26□□□□□ -1.57
SSO2YMR183C HXT13P39924 564 aa5.26□□□□□ -1.57
SSO2YMR183C HXT17P53631 564 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms