RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C SER3P40054 469 aa2.54□□□□□ -2
CSF1YLR087C YJL070CP40361 888 aa2.54□□□□□ -2
CSF1YLR087C VPS60Q03390 229 aa2.54□□□□□ -2
CSF1YLR087C SEC63P14906 663 aa2.53□□□□□ -2
CSF1YLR087C CDC23P16522 626 aa2.53□□□□□ -2
CSF1YLR087C ATP12P22135 325 aa2.53□□□□□ -2
CSF1YLR087C CDC48P25694 835 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C HSP78P33416 811 aa2.53□□□□□ -2
CSF1YLR087C NUP60P39705 539 aa2.53□□□□□ -2
CSF1YLR087C CEP3P40969 608 aa2.53□□□□□ -2
CSF1YLR087C TFG2P41896 400 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C AAD10P47182 288 aa2.53□□□□□ -2
CSF1YLR087C HOP2P53187 214 aa2.53□□□□□ -2
CSF1YLR087C GIS4Q04233 774 aa2.53□□□□□ -2
CSF1YLR087C SSP2Q08646 371 aa2.53□□□□□ -2
CSF1YLR087C STE11P23561 717 aa2.53□□□□□ -2
CSF1YLR087C YJU2P28320 278 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C CRM1P30822 1084 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C ATP11P32453 318 aa2.53□□□□□ -2
CSF1YLR087C YJR142WP47173 342 aa2.53□□□□□ -2
CSF1YLR087C GYL1Q04322 720 aa2.53□□□□□ -2
CSF1YLR087C PET18P25362 215 aa2.53□□□□□ -2
CSF1YLR087C KTR2P33550 425 aa2.53□□□□□ -2
CSF1YLR087C YIL001WP40560 513 aa2.53□□□□□ -2
CSF1YLR087C LIA1P47120 325 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C GIR2Q03768 265 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C RRP36Q12481 300 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C CMC2Q3E7A4 109 aa2.53□□□□□ -2
CSF1YLR087C HSP30P25619 332 aa2.53□□□□□ -2
CSF1YLR087C RPS5P26783 225 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C GIM4P40005 111 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C ATP22P50273 684 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C NBP1P52919 319 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C CWC24P53769 259 aa2.53□□□□□ -2
CSF1YLR087C KRE33P53914 1056 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C ARP5P53946 755 aa2.53□□□□□ -2
CSF1YLR087C ERB1Q04660 807 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C VPS74Q06385 345 aa2.53□□□□□ -2
CSF1YLR087C YLH47Q06493 454 aa2.53□□□□□ -2
CSF1YLR087C ISA1Q07821 250 aaPredicted RBP2.53□□□□□ -2
CSF1YLR087C CMP2P14747 604 aa2.53□□□□□ -2
CSF1YLR087C GAT1P43574 510 aa2.53□□□□□ -2
CSF1YLR087C BFA1P47113 574 aa2.53□□□□□ -2
CSF1YLR087C NNF1P47149 201 aa2.53□□□□□ -2
CSF1YLR087C EFM5P53200 248 aaKnown RBP2.53□□□□□ -2
CSF1YLR087C SOV1Q04748 898 aa2.53□□□□□ -2
CSF1YLR087C YOR114WQ12219 294 aa2.53□□□□□ -2
CSF1YLR087C YGR161W-CQ3E744 92 aa2.53□□□□□ -2
CSF1YLR087C CSE4P36012 229 aa2.53□□□□□ -2
CSF1YLR087C VPS51P36116 164 aa2.53□□□□□ -2
CSF1YLR087C SEN34P39707 275 aa2.53□□□□□ -2
CSF1YLR087C PIF1P07271 859 aa2.53□□□□□ -2.01
CSF1YLR087C NMT1P14743 455 aa2.53□□□□□ -2.01
CSF1YLR087C MRPL36P36531 177 aa2.53□□□□□ -2.01
CSF1YLR087C PEX18P38855 283 aa2.53□□□□□ -2.01
CSF1YLR087C YER130CP39959 443 aa2.53□□□□□ -2.01
CSF1YLR087C SAP155P43612 1002 aa2.53□□□□□ -2.01
CSF1YLR087C TIM54P47045 478 aa2.53□□□□□ -2.01
CSF1YLR087C PTA1Q01329 785 aaPredicted RBP2.53□□□□□ -2.01
CSF1YLR087C CDC123Q05791 360 aa2.53□□□□□ -2.01
CSF1YLR087C YPL264CQ08980 353 aa2.53□□□□□ -2.01
CSF1YLR087C ATP16Q12165 160 aa2.53□□□□□ -2.01
CSF1YLR087C SRS2P12954 1174 aa2.52□□□□□ -2.01
CSF1YLR087C SPC72P39723 622 aa2.52□□□□□ -2.01
CSF1YLR087C MUK1Q02866 612 aa2.52□□□□□ -2.01
CSF1YLR087C RGR1P19263 1082 aa2.52□□□□□ -2.01
CSF1YLR087C REC107P21651 314 aa2.52□□□□□ -2.01
CSF1YLR087C SSA4P22202 642 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C PHO87P25360 923 aa2.52□□□□□ -2.01
CSF1YLR087C SLX5P32828 619 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C TOF1P53840 1238 aa2.52□□□□□ -2.01
CSF1YLR087C ADA2Q02336 434 aa2.52□□□□□ -2.01
CSF1YLR087C RVB1Q03940 463 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C NDL1Q06568 189 aa2.52□□□□□ -2.01
CSF1YLR087C RKM4Q12504 494 aa2.52□□□□□ -2.01
CSF1YLR087C PGA3Q12746 312 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C RAD4P14736 754 aa2.52□□□□□ -2.01
CSF1YLR087C SWI4P25302 1093 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C DBP7P36120 742 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C FAT1P38225 669 aa2.52□□□□□ -2.01
CSF1YLR087C RRN5Q02983 363 aa2.52□□□□□ -2.01
CSF1YLR087C FIN1Q03898 291 aa2.52□□□□□ -2.01
CSF1YLR087C YIG1Q08956 461 aa2.52□□□□□ -2.01
CSF1YLR087C SPT3P06844 337 aa2.52□□□□□ -2.01
CSF1YLR087C MAS2P11914 482 aa2.52□□□□□ -2.01
CSF1YLR087C KAR2P16474 682 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C PEP12P32854 288 aa2.52□□□□□ -2.01
CSF1YLR087C NTH2P35172 780 aa2.52□□□□□ -2.01
CSF1YLR087C GLG1P36143 616 aa2.52□□□□□ -2.01
CSF1YLR087C RCO1Q04779 684 aa2.52□□□□□ -2.01
CSF1YLR087C YDL073WQ07454 984 aa2.52□□□□□ -2.01
CSF1YLR087C CDC19P00549 500 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C CDC15P27636 974 aa2.52□□□□□ -2.01
CSF1YLR087C SRL3P36167 246 aa2.52□□□□□ -2.01
CSF1YLR087C SLX1P38324 304 aa2.52□□□□□ -2.01
CSF1YLR087C KEL1P38853 1164 aaKnown RBP2.52□□□□□ -2.01
CSF1YLR087C YJR098CP47139 656 aa2.52□□□□□ -2.01
CSF1YLR087C FCP1Q03254 732 aa2.52□□□□□ -2.01
CSF1YLR087C ENT2Q05785 613 aa2.52□□□□□ -2.01
CSF1YLR087C SLP1Q12232 587 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms