RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C ERS1P17261 260 aa8.84□□□□□ -0.99
SKG1YKR100C REC8Q12188 680 aa8.84□□□□□ -0.99
SKG1YKR100C STM1P39015 273 aaKnown RBP8.83□□□□□ -1
SKG1YKR100C NOC3Q07896 663 aaPredicted RBP8.83□□□□□ -1
SKG1YKR100C PRP5P21372 849 aaPredicted RBP8.82□□□□□ -1
SKG1YKR100C NUT1P53114 1132 aa8.82□□□□□ -1
SKG1YKR100C NCE103P53615 221 aa8.82□□□□□ -1
SKG1YKR100C COQ2P32378 372 aa8.81□□□□□ -1
SKG1YKR100C SAP155P43612 1002 aa8.81□□□□□ -1
SKG1YKR100C SAM37P50110 327 aa8.81□□□□□ -1
SKG1YKR100C KIP3P53086 805 aaKnown RBP8.81□□□□□ -1
SKG1YKR100C NAM7P30771 971 aaKnown RBP8.8□□□□□ -1
SKG1YKR100C AKR1P39010 764 aa8.8□□□□□ -1
SKG1YKR100C MSC6Q08818 692 aaKnown RBP8.8□□□□□ -1
SKG1YKR100C VMR1P38735 1592 aa8.8□□□□□ -1
SKG1YKR100C HTS1P07263 546 aaKnown RBP8.79□□□□□ -1
SKG1YKR100C FAR11P53917 953 aa8.79□□□□□ -1
SKG1YKR100C PPX1P38698 397 aa8.78□□□□□ -1
SKG1YKR100C MON1P53129 644 aa8.78□□□□□ -1
SKG1YKR100C PMT7Q06644 662 aa8.78□□□□□ -1
SKG1YKR100C YLR122CQ12312 125 aa8.78□□□□□ -1
SKG1YKR100C MET4P32389 672 aa8.77□□□□□ -1.01
SKG1YKR100C SAF1P38352 637 aa8.77□□□□□ -1.01
SKG1YKR100C YAF9P53930 226 aa8.77□□□□□ -1.01
SKG1YKR100C YIG1Q08956 461 aa8.77□□□□□ -1.01
SKG1YKR100C CIC1P38779 376 aaKnown RBP8.76□□□□□ -1.01
SKG1YKR100C ALO1P54783 526 aaKnown RBP8.76□□□□□ -1.01
SKG1YKR100C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SKG1YKR100C WHI5Q12416 295 aa8.76□□□□□ -1.01
SKG1YKR100C TOM1Q03280 3268 aa8.76□□□□□ -1.01
SKG1YKR100C PHO4P07270 312 aaKnown RBP8.75□□□□□ -1.01
SKG1YKR100C MCM5P29496 775 aaKnown RBP8.75□□□□□ -1.01
SKG1YKR100C KAE1P36132 386 aa8.75□□□□□ -1.01
SKG1YKR100C RVS167P39743 482 aaKnown RBP8.75□□□□□ -1.01
SKG1YKR100C IML1P47170 1584 aa8.74□□□□□ -1.01
SKG1YKR100C YCS4Q06156 1176 aa8.74□□□□□ -1.01
SKG1YKR100C YRF1-2P40105 1681 aa8.73□□□□□ -1.01
SKG1YKR100C IPL1P38991 367 aa8.73□□□□□ -1.01
SKG1YKR100C GCV1P48015 400 aa8.73□□□□□ -1.01
SKG1YKR100C UTP22P53254 1237 aaPredicted RBP8.73□□□□□ -1.01
SKG1YKR100C YOR223WQ12015 292 aa8.73□□□□□ -1.01
SKG1YKR100C CHS2P14180 963 aa8.72□□□□□ -1.01
SKG1YKR100C SEN54Q02825 467 aaPredicted RBP8.72□□□□□ -1.01
SKG1YKR100C URN1Q06525 465 aaKnown RBP8.72□□□□□ -1.01
SKG1YKR100C TRP3P00937 484 aa8.71□□□□□ -1.02
SKG1YKR100C GCD6P32501 712 aaKnown RBP8.71□□□□□ -1.02
SKG1YKR100C VPS35P34110 944 aa8.71□□□□□ -1.02
SKG1YKR100C MEC3Q02574 474 aa8.71□□□□□ -1.02
SKG1YKR100C STH1P32597 1359 aa8.71□□□□□ -1.02
SKG1YKR100C PDR11P40550 1411 aa8.71□□□□□ -1.02
SKG1YKR100C SEC20P28791 383 aa8.7□□□□□ -1.02
SKG1YKR100C NRD1P53617 575 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
SKG1YKR100C GIC2Q06648 383 aa8.7□□□□□ -1.02
SKG1YKR100C YLL054CQ12244 843 aa8.7□□□□□ -1.02
SKG1YKR100C TY1A-LR4P0C2I8 440 aaKnown RBP8.69□□□□□ -1.02
SKG1YKR100C TY1A-DR6P0CX70 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-ER1P0CX71 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-LR2P0CX72 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-PLP0CX73 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-JR1P0CX74 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-LR3P0CX75 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-ML2P0CX76 440 aa8.69□□□□□ -1.02
SKG1YKR100C OMA1P36163 345 aa8.69□□□□□ -1.02
SKG1YKR100C UGA2P38067 497 aa8.69□□□□□ -1.02
SKG1YKR100C DAK2P43550 591 aa8.69□□□□□ -1.02
SKG1YKR100C YGR130CP53278 816 aa8.69□□□□□ -1.02
SKG1YKR100C DOT1Q04089 582 aaKnown RBP8.69□□□□□ -1.02
SKG1YKR100C TY1A-GR1Q12085 440 aa8.69□□□□□ -1.02
SKG1YKR100C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.69□□□□□ -1.02
SKG1YKR100C TY1A-OLQ92392 440 aaKnown RBP8.69□□□□□ -1.02
SKG1YKR100C PRP40P33203 583 aaKnown RBP8.68□□□□□ -1.02
SKG1YKR100C MAC1P35192 417 aa8.68□□□□□ -1.02
SKG1YKR100C GPT2P36148 743 aa8.68□□□□□ -1.02
SKG1YKR100C YKR073CP36153 106 aa8.68□□□□□ -1.02
SKG1YKR100C REI1P38344 393 aaPredicted RBP8.67□□□□□ -1.02
SKG1YKR100C INP52P50942 1183 aa8.67□□□□□ -1.02
SKG1YKR100C TOS4Q06266 489 aa8.67□□□□□ -1.02
SKG1YKR100C MED7Q08278 222 aa8.67□□□□□ -1.02
SKG1YKR100C ALG6Q12001 544 aaKnown RBP8.67□□□□□ -1.02
SKG1YKR100C UGA4P32837 571 aa8.66□□□□□ -1.02
SKG1YKR100C YML020WQ03722 664 aa8.65□□□□□ -1.02
SKG1YKR100C DAL4Q04895 635 aa8.65□□□□□ -1.02
SKG1YKR100C YKL077WP36081 392 aa8.64□□□□□ -1.03
SKG1YKR100C EXO5P38289 585 aa8.64□□□□□ -1.03
SKG1YKR100C MSB1P21339 1137 aaKnown RBP8.63□□□□□ -1.03
SKG1YKR100C TOS1P38288 455 aa8.63□□□□□ -1.03
SKG1YKR100C SPO74P45819 413 aa8.63□□□□□ -1.03
SKG1YKR100C NOG1Q02892 647 aaKnown RBP8.63□□□□□ -1.03
SKG1YKR100C OXR1Q08952 273 aa8.63□□□□□ -1.03
SKG1YKR100C SLD2P34252 453 aa8.62□□□□□ -1.03
SKG1YKR100C SHU2P38957 223 aa8.62□□□□□ -1.03
SKG1YKR100C ULP1Q02724 621 aa8.62□□□□□ -1.03
SKG1YKR100C IMH1Q06704 911 aaKnown RBP8.62□□□□□ -1.03
SKG1YKR100C GCN2P15442 1659 aa8.62□□□□□ -1.03
SKG1YKR100C CYC7P00045 113 aa8.61□□□□□ -1.03
SKG1YKR100C RPT1P33299 467 aaKnown RBP8.61□□□□□ -1.03
SKG1YKR100C SLS1P42900 643 aa8.61□□□□□ -1.03
SKG1YKR100C ENT1Q12518 454 aa8.61□□□□□ -1.03
SKG1YKR100C KAR2P16474 682 aaKnown RBP8.6□□□□□ -1.03
SKG1YKR100C ARL1P38116 183 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 103.8 ms