RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C ADI1Q03677 179 aa6.87□□□□□ -1.31
RPF2YKR081C GAS1P22146 559 aaKnown RBP6.86□□□□□ -1.31
RPF2YKR081C NIT1P40447 199 aa6.86□□□□□ -1.31
RPF2YKR081C SLS1P42900 643 aa6.86□□□□□ -1.31
RPF2YKR081C YGR045CP53229 120 aa6.86□□□□□ -1.31
RPF2YKR081C TRE1Q08919 783 aa6.86□□□□□ -1.31
RPF2YKR081C ATE1P16639 503 aa6.85□□□□□ -1.31
RPF2YKR081C NEM1P38757 446 aa6.85□□□□□ -1.31
RPF2YKR081C PEX28P38848 579 aa6.85□□□□□ -1.31
RPF2YKR081C ALT1P52893 592 aa6.85□□□□□ -1.31
RPF2YKR081C EAR1Q03212 550 aa6.85□□□□□ -1.31
RPF2YKR081C SSY1Q03770 852 aa6.85□□□□□ -1.31
RPF2YKR081C RRP15Q06511 250 aaPredicted RBP6.85□□□□□ -1.31
RPF2YKR081C VMA4P22203 233 aaKnown RBP6.84□□□□□ -1.31
RPF2YKR081C YJR107WP47145 328 aa6.84□□□□□ -1.31
RPF2YKR081C MCD1Q12158 566 aa6.84□□□□□ -1.31
RPF2YKR081C SMY2P32909 740 aaKnown RBP6.83□□□□□ -1.32
RPF2YKR081C NNK1P36003 928 aa6.83□□□□□ -1.32
RPF2YKR081C UTP5Q04177 643 aaKnown RBP6.83□□□□□ -1.32
RPF2YKR081C YVC1Q12324 675 aa6.83□□□□□ -1.32
RPF2YKR081C PRO1P32264 428 aa6.82□□□□□ -1.32
RPF2YKR081C MRPS18P42847 217 aa6.82□□□□□ -1.32
RPF2YKR081C YGL140CP53120 1219 aa6.82□□□□□ -1.32
RPF2YKR081C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32 RIP-Chip
RPF2YKR081C SEC23P15303 768 aaKnown RBP6.81□□□□□ -1.32
RPF2YKR081C ATG14P38270 344 aa6.81□□□□□ -1.32
RPF2YKR081C RPS26AP39938 119 aaKnown RBP6.81□□□□□ -1.32
RPF2YKR081C RPS26BP39939 119 aaKnown RBP6.81□□□□□ -1.32
RPF2YKR081C RAD2P07276 1031 aa6.8□□□□□ -1.32
RPF2YKR081C CYC8P14922 966 aa6.8□□□□□ -1.32
RPF2YKR081C PRE9P23638 258 aaKnown RBP6.8□□□□□ -1.32
RPF2YKR081C RDH54P38086 958 aa6.8□□□□□ -1.32
RPF2YKR081C YAR028WP39548 234 aa6.8□□□□□ -1.32
RPF2YKR081C PIC2P40035 300 aa6.8□□□□□ -1.32
RPF2YKR081C XKS1P42826 600 aa6.8□□□□□ -1.32
RPF2YKR081C TAF13P11747 167 aa6.79□□□□□ -1.32
RPF2YKR081C HSE1P38753 452 aa6.79□□□□□ -1.32
RPF2YKR081C PTC7P38797 343 aa6.79□□□□□ -1.32
RPF2YKR081C LAP2Q10740 671 aa6.79□□□□□ -1.32
RPF2YKR081C MCM2P29469 868 aa6.78□□□□□ -1.32
RPF2YKR081C PEX7P39108 375 aa6.78□□□□□ -1.32
RPF2YKR081C RKM2Q03942 479 aa6.78□□□□□ -1.32
RPF2YKR081C ADD66P36040 267 aa6.77□□□□□ -1.33
RPF2YKR081C FYV10P40492 516 aa6.77□□□□□ -1.33
RPF2YKR081C TPP1Q03796 238 aa6.77□□□□□ -1.33
RPF2YKR081C HEM13P11353 328 aaKnown RBP6.76□□□□□ -1.33
RPF2YKR081C SEC8P32855 1065 aa6.76□□□□□ -1.33
RPF2YKR081C GTS1P40956 396 aa6.76□□□□□ -1.33
RPF2YKR081C SPR28Q04921 423 aa6.76□□□□□ -1.33
RPF2YKR081C YKL222CP35995 705 aa6.75□□□□□ -1.33
RPF2YKR081C RMD1Q03441 430 aa6.75□□□□□ -1.33
RPF2YKR081C EST2Q06163 884 aa6.75□□□□□ -1.33
RPF2YKR081C ESF1Q06344 628 aaKnown RBP6.75□□□□□ -1.33
RPF2YKR081C PUS7Q08647 676 aaKnown RBP6.75□□□□□ -1.33
RPF2YKR081C NMD3P38861 518 aaKnown RBP6.74□□□□□ -1.33
RPF2YKR081C ORC3P54790 616 aa6.74□□□□□ -1.33
RPF2YKR081C YLR257WQ06146 321 aaKnown RBP6.74□□□□□ -1.33
RPF2YKR081C RET1P22276 1149 aaKnown RBP6.73□□□□□ -1.33
RPF2YKR081C YNR063WP53749 607 aa6.73□□□□□ -1.33
RPF2YKR081C OYE2Q03558 400 aaKnown RBP6.73□□□□□ -1.33
RPF2YKR081C RSA3Q05942 220 aaKnown RBP6.73□□□□□ -1.33
RPF2YKR081C VPS53P47061 822 aa6.72□□□□□ -1.33
RPF2YKR081C ENT3P47160 408 aa6.72□□□□□ -1.33
RPF2YKR081C HDA2Q06629 674 aa6.72□□□□□ -1.33
RPF2YKR081C CDA2Q06703 312 aa6.72□□□□□ -1.33
RPF2YKR081C HRK1Q08732 759 aaKnown RBP6.72□□□□□ -1.33
RPF2YKR081C LPX1Q12405 387 aaKnown RBP6.72□□□□□ -1.33
RPF2YKR081C PEP7P32609 515 aa6.71□□□□□ -1.34
RPF2YKR081C TSA1P34760 196 aaKnown RBP6.71□□□□□ -1.34
RPF2YKR081C FOL2P51601 243 aaKnown RBP6.71□□□□□ -1.34
RPF2YKR081C QNS1P38795 714 aaKnown RBP6.7□□□□□ -1.34
RPF2YKR081C SIW14P53965 281 aa6.7□□□□□ -1.34
RPF2YKR081C MRL1Q06815 381 aa6.7□□□□□ -1.34
RPF2YKR081C ESC8Q08119 714 aa6.7□□□□□ -1.34
RPF2YKR081C DED1P06634 604 aaKnown RBP6.68□□□□□ -1.34
RPF2YKR081C YCR015CP25616 317 aa6.68□□□□□ -1.34
RPF2YKR081C AFG2P32794 780 aa6.68□□□□□ -1.34
RPF2YKR081C YHL012WP38709 493 aa6.68□□□□□ -1.34
RPF2YKR081C GNP1P48813 663 aa6.68□□□□□ -1.34
RPF2YKR081C MRPL22P53881 309 aa6.68□□□□□ -1.34
RPF2YKR081C GCR1P07261 785 aa6.67□□□□□ -1.34
RPF2YKR081C ETP1P38748 585 aaKnown RBP6.67□□□□□ -1.34
RPF2YKR081C ROD1Q02805 837 aa6.67□□□□□ -1.34
RPF2YKR081C YJL045WP47052 634 aa6.66□□□□□ -1.34
RPF2YKR081C PTC5Q12511 572 aa6.66□□□□□ -1.34
RPF2YKR081C MKK2P32491 506 aa6.65□□□□□ -1.34
RPF2YKR081C AIM26P32858 118 aa6.65□□□□□ -1.34
RPF2YKR081C ALG3P38179 458 aa6.65□□□□□ -1.34
RPF2YKR081C AIM3P38266 947 aaKnown RBP6.65□□□□□ -1.34
RPF2YKR081C HXT13P39924 564 aa6.65□□□□□ -1.34
RPF2YKR081C HXT17P53631 564 aa6.65□□□□□ -1.34
RPF2YKR081C HXT15P54854 567 aa6.65□□□□□ -1.34
RPF2YKR081C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
RPF2YKR081C RTT10Q08924 1013 aa6.65□□□□□ -1.34
RPF2YKR081C PRP6P19735 899 aaPredicted RBP6.64□□□□□ -1.35
RPF2YKR081C RAD27P26793 382 aa6.64□□□□□ -1.35
RPF2YKR081C MDL2P33311 773 aa6.64□□□□□ -1.35
RPF2YKR081C GIP4P39732 760 aa6.64□□□□□ -1.35
RPF2YKR081C SAM35P14693 329 aa6.63□□□□□ -1.35
RPF2YKR081C KIP1P28742 1111 aa6.63□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms