RNA–Protein interactions for RNA: YKL176C

LST4, Transcript of Protein possibly involved in a post-Golgi secretory pathway, yeast

Gene LST4, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LST4	YKL176C	YGR045C	P53229	120 aa		4.57	□□□□□ -1.68
LST4	YKL176C	RKM2	Q03942	479 aa		4.57	□□□□□ -1.68
LST4	YKL176C	YCK2	P23292	546 aa	Known RBP	4.56	□□□□□ -1.68
LST4	YKL176C	SLN1	P39928	1220 aa	Predicted RBP	4.56	□□□□□ -1.68
LST4	YKL176C	ICP55	P40051	511 aa		4.56	□□□□□ -1.68
LST4	YKL176C	ELA1	P53861	379 aa	Predicted RBP	4.56	□□□□□ -1.68
LST4	YKL176C	EEB1	Q02891	456 aa		4.56	□□□□□ -1.68
LST4	YKL176C	MKK2	P32491	506 aa		4.56	□□□□□ -1.68
LST4	YKL176C	TAT1	P38085	619 aa		4.56	□□□□□ -1.68
LST4	YKL176C	YGR053C	P53234	283 aa		4.56	□□□□□ -1.68
LST4	YKL176C	LAP2	Q10740	671 aa		4.56	□□□□□ -1.68
LST4	YKL176C	RER2	P35196	286 aa		4.55	□□□□□ -1.68
LST4	YKL176C	GPT2	P36148	743 aa		4.55	□□□□□ -1.68
LST4	YKL176C	HSE1	P38753	452 aa		4.55	□□□□□ -1.68
LST4	YKL176C	ARI1	P53111	347 aa	Known RBP	4.55	□□□□□ -1.68
LST4	YKL176C	RAT1	Q02792	1006 aa	Known RBP	4.55	□□□□□ -1.68
LST4	YKL176C	PUS1	Q12211	544 aa	Known RBP	4.55	□□□□□ -1.68
LST4	YKL176C	TRP2	P00899	507 aa	Known RBP	4.54	□□□□□ -1.68
LST4	YKL176C	LYP1	P32487	611 aa		4.54	□□□□□ -1.68
LST4	YKL176C	AFG2	P32794	780 aa		4.54	□□□□□ -1.68
LST4	YKL176C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	RIP-Chip
LST4	YKL176C	SYP1	P25623	870 aa	Known RBP	4.54	□□□□□ -1.68
LST4	YKL176C	FAL1	Q12099	399 aa	Known RBP	4.54	□□□□□ -1.68
LST4	YKL176C	WRS1	Q12109	432 aa	Known RBP	4.54	□□□□□ -1.68
LST4	YKL176C	SSF2	Q12153	453 aa	Predicted RBP	4.54	□□□□□ -1.68
LST4	YKL176C	SKN7	P38889	622 aa		4.53	□□□□□ -1.68
LST4	YKL176C	MSH4	P40965	878 aa	Predicted RBP	4.53	□□□□□ -1.68
LST4	YKL176C	TYW3	P53177	273 aa		4.53	□□□□□ -1.68
LST4	YKL176C	PRI2	P20457	528 aa		4.53	□□□□□ -1.68
LST4	YKL176C	SMY2	P32909	740 aa	Known RBP	4.53	□□□□□ -1.68
LST4	YKL176C	NNK1	P36003	928 aa		4.53	□□□□□ -1.68
LST4	YKL176C	ALG3	P38179	458 aa		4.53	□□□□□ -1.68
LST4	YKL176C	VPS53	P47061	822 aa		4.53	□□□□□ -1.68
LST4	YKL176C	SPO20	Q04359	397 aa		4.53	□□□□□ -1.68
LST4	YKL176C	OPI10	Q08202	246 aa		4.53	□□□□□ -1.68
LST4	YKL176C	PTC5	Q12511	572 aa		4.53	□□□□□ -1.68
LST4	YKL176C	BAS1	P22035	811 aa		4.52	□□□□□ -1.69
LST4	YKL176C	AKR1	P39010	764 aa		4.52	□□□□□ -1.69
LST4	YKL176C	CNN1	P43618	361 aa		4.52	□□□□□ -1.69
LST4	YKL176C	NNF1	P47149	201 aa		4.52	□□□□□ -1.69
LST4	YKL176C	RSA3	Q05942	220 aa	Known RBP	4.52	□□□□□ -1.69
LST4	YKL176C	GIC2	Q06648	383 aa		4.52	□□□□□ -1.69
LST4	YKL176C	DBP5	P20449	482 aa	Known RBP	4.52	□□□□□ -1.69
LST4	YKL176C	RET1	P22276	1149 aa	Known RBP	4.52	□□□□□ -1.69
LST4	YKL176C	NFS1	P25374	497 aa		4.52	□□□□□ -1.69
LST4	YKL176C	TIF35	Q04067	274 aa	Known RBP	4.52	□□□□□ -1.69
LST4	YKL176C	YLR257W	Q06146	321 aa	Known RBP	4.52	□□□□□ -1.69
LST4	YKL176C	MCA1	Q08601	432 aa		4.52	□□□□□ -1.69
LST4	YKL176C	QNS1	P38795	714 aa	Known RBP	4.51	□□□□□ -1.69
LST4	YKL176C	NAM7	P30771	971 aa	Known RBP	4.51	□□□□□ -1.69
LST4	YKL176C	MOT2	P34909	587 aa	Known RBP	4.51	□□□□□ -1.69
LST4	YKL176C	MCM7	P38132	845 aa		4.51	□□□□□ -1.69
LST4	YKL176C	KRI1	P42846	591 aa	Known RBP	4.51	□□□□□ -1.69
LST4	YKL176C	ALT1	P52893	592 aa		4.51	□□□□□ -1.69
LST4	YKL176C	AOS1	Q06624	347 aa		4.51	□□□□□ -1.69
LST4	YKL176C	RPS4A	P0CX35	261 aa	Known RBP	4.5	□□□□□ -1.69
LST4	YKL176C	RPS4B	P0CX36	261 aa	Known RBP	4.5	□□□□□ -1.69
LST4	YKL176C	INO1	P11986	533 aa		4.5	□□□□□ -1.69
LST4	YKL176C	COQ2	P32378	372 aa		4.5	□□□□□ -1.69
LST4	YKL176C	YKL069W	P36088	180 aa		4.5	□□□□□ -1.69
LST4	YKL176C	RGD1	P38339	666 aa		4.5	□□□□□ -1.69
LST4	YKL176C	HRK1	Q08732	759 aa	Known RBP	4.5	□□□□□ -1.69
LST4	YKL176C	YPL034W	Q03083	165 aa		4.5	□□□□□ -1.69
LST4	YKL176C	TDA5	Q06417	326 aa	Known RBP	4.5	□□□□□ -1.69
LST4	YKL176C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
LST4	YKL176C	ABD1	P32783	436 aa	Predicted RBP	4.49	□□□□□ -1.69
LST4	YKL176C	PGM1	P33401	570 aa	Known RBP	4.49	□□□□□ -1.69
LST4	YKL176C	SAF1	P38352	637 aa		4.49	□□□□□ -1.69
LST4	YKL176C	HNT2	P49775	206 aa		4.49	□□□□□ -1.69
LST4	YKL176C	YLR225C	Q05948	407 aa	Known RBP	4.49	□□□□□ -1.69
LST4	YKL176C	ESC2	Q06340	456 aa		4.49	□□□□□ -1.69
LST4	YKL176C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
LST4	YKL176C	MLS1	P30952	554 aa		4.49	□□□□□ -1.69
LST4	YKL176C	OCA5	P38738	679 aa		4.49	□□□□□ -1.69
LST4	YKL176C	NMD3	P38861	518 aa	Known RBP	4.49	□□□□□ -1.69
LST4	YKL176C	MPH1	P40562	993 aa		4.49	□□□□□ -1.69
LST4	YKL176C	TPP1	Q03796	238 aa		4.49	□□□□□ -1.69
LST4	YKL176C	PUS7	Q08647	676 aa	Known RBP	4.49	□□□□□ -1.69
LST4	YKL176C	AGP1	P25376	633 aa		4.48	□□□□□ -1.69
LST4	YKL176C	KIP1	P28742	1111 aa		4.48	□□□□□ -1.69
LST4	YKL176C	SEA4	P38164	1038 aa		4.48	□□□□□ -1.69
LST4	YKL176C	SPF1	P39986	1215 aa	Known RBP	4.48	□□□□□ -1.69
LST4	YKL176C	MMM1	P41800	426 aa		4.48	□□□□□ -1.69
LST4	YKL176C	YPL260W	Q08977	551 aa		4.48	□□□□□ -1.69
LST4	YKL176C	RKM4	Q12504	494 aa		4.48	□□□□□ -1.69
LST4	YKL176C	GRX1	P25373	110 aa	Known RBP	4.48	□□□□□ -1.69
LST4	YKL176C	SBA1	P28707	216 aa	Known RBP	4.48	□□□□□ -1.69
LST4	YKL176C	YKL107W	P34251	309 aa		4.48	□□□□□ -1.69
LST4	YKL176C	WHI3	P34761	661 aa	Known RBP	4.48	□□□□□ -1.69
LST4	YKL176C	YJL049W	P47048	450 aa		4.48	□□□□□ -1.69
LST4	YKL176C	YJL045W	P47052	634 aa		4.48	□□□□□ -1.69
LST4	YKL176C	EAR1	Q03212	550 aa		4.48	□□□□□ -1.69
LST4	YKL176C	SPO21	Q12411	609 aa		4.48	□□□□□ -1.69
LST4	YKL176C	GPB2	P39717	880 aa		4.47	□□□□□ -1.69
LST4	YKL176C	CIT3	P43635	486 aa		4.47	□□□□□ -1.69
LST4	YKL176C	YGL176C	P46945	554 aa		4.47	□□□□□ -1.69
LST4	YKL176C	CCT8	P47079	568 aa	Known RBP	4.47	□□□□□ -1.69
LST4	YKL176C	YPL066W	Q12194	479 aa		4.47	□□□□□ -1.69
LST4	YKL176C	CHS2	P14180	963 aa		4.46	□□□□□ -1.7
LST4	YKL176C	SNF7	P39929	240 aa	Known RBP	4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms