RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C HDA2Q06629 674 aa3.96□□□□□ -1.78
SHE2YKL130C LAP2Q10740 671 aa3.96□□□□□ -1.78
SHE2YKL130C SAM35P14693 329 aa3.95□□□□□ -1.78
SHE2YKL130C AIM26P32858 118 aa3.95□□□□□ -1.78
SHE2YKL130C MDL2P33311 773 aa3.95□□□□□ -1.78
SHE2YKL130C TOD6P34219 525 aa3.95□□□□□ -1.78
SHE2YKL130C SNO2P53823 222 aa3.95□□□□□ -1.78
SHE2YKL130C UTP5Q04177 643 aaKnown RBP3.95□□□□□ -1.78
SHE2YKL130C RSA3Q05942 220 aaKnown RBP3.95□□□□□ -1.78
SHE2YKL130C HRK1Q08732 759 aaKnown RBP3.95□□□□□ -1.78
SHE2YKL130C MSH3P25336 1018 aa3.94□□□□□ -1.78
SHE2YKL130C XKS1P42826 600 aa3.94□□□□□ -1.78
SHE2YKL130C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SHE2YKL130C NOG1Q02892 647 aaKnown RBP3.94□□□□□ -1.78
SHE2YKL130C HAT1Q12341 374 aa3.94□□□□□ -1.78
SHE2YKL130C SOD2P00447 233 aa3.93□□□□□ -1.78
SHE2YKL130C RPS13P05756 151 aaKnown RBP3.93□□□□□ -1.78
SHE2YKL130C SQT1P35184 431 aa3.93□□□□□ -1.78
SHE2YKL130C RSM26P47141 266 aa3.93□□□□□ -1.78
SHE2YKL130C YPL277CQ08989 487 aa3.93□□□□□ -1.78
SHE2YKL130C YJL045WP47052 634 aa3.92□□□□□ -1.78
SHE2YKL130C VMA4P22203 233 aaKnown RBP3.91□□□□□ -1.78
SHE2YKL130C UGA4P32837 571 aa3.91□□□□□ -1.78
SHE2YKL130C PRP40P33203 583 aaKnown RBP3.91□□□□□ -1.78
SHE2YKL130C GIS1Q03833 894 aa3.91□□□□□ -1.78
SHE2YKL130C YOR352WQ08816 343 aa3.91□□□□□ -1.78
SHE2YKL130C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79 RIP-Chip
SHE2YKL130C KAR2P16474 682 aaKnown RBP3.9□□□□□ -1.79
SHE2YKL130C SRO9P25567 434 aaKnown RBP3.9□□□□□ -1.79
SHE2YKL130C QNS1P38795 714 aaKnown RBP3.9□□□□□ -1.79
SHE2YKL130C DAL4Q04895 635 aa3.9□□□□□ -1.79
SHE2YKL130C NBA1Q08229 501 aaKnown RBP3.9□□□□□ -1.79
SHE2YKL130C YLR358CO13565 187 aa3.89□□□□□ -1.79
SHE2YKL130C SPS1P08458 490 aa3.89□□□□□ -1.79
SHE2YKL130C GCD6P32501 712 aaKnown RBP3.89□□□□□ -1.79
SHE2YKL130C PEX28P38848 579 aa3.89□□□□□ -1.79
SHE2YKL130C VPS53P47061 822 aa3.89□□□□□ -1.79
SHE2YKL130C ULP1Q02724 621 aa3.89□□□□□ -1.79
SHE2YKL130C RSC58Q07979 502 aa3.89□□□□□ -1.79
SHE2YKL130C YSC84P32793 468 aa3.88□□□□□ -1.79
SHE2YKL130C ADD66P36040 267 aa3.88□□□□□ -1.79
SHE2YKL130C GEF1P37020 779 aa3.88□□□□□ -1.79
SHE2YKL130C CLU1Q03690 1277 aaKnown RBP3.88□□□□□ -1.79
SHE2YKL130C COQ4O13525 335 aa3.87□□□□□ -1.79
SHE2YKL130C VPS35P34110 944 aa3.87□□□□□ -1.79
SHE2YKL130C YHL050CP38721 697 aa3.87□□□□□ -1.79
SHE2YKL130C YHR219WP38900 624 aa3.87□□□□□ -1.79
SHE2YKL130C RKM2Q03942 479 aa3.87□□□□□ -1.79
SHE2YKL130C GSF2Q04697 403 aaKnown RBP3.87□□□□□ -1.79
SHE2YKL130C SHM2P37291 469 aaKnown RBP3.86□□□□□ -1.79
SHE2YKL130C SPT20P50875 604 aa3.86□□□□□ -1.79
SHE2YKL130C ENV11P53246 860 aa3.86□□□□□ -1.79
SHE2YKL130C OXR1Q08952 273 aa3.86□□□□□ -1.79
SHE2YKL130C PHO4P07270 312 aaKnown RBP3.85□□□□□ -1.79
SHE2YKL130C PRE10P21242 288 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SHE2YKL130C ABZ1P37254 787 aaPredicted RBP3.85□□□□□ -1.79
SHE2YKL130C CCZ1P38273 704 aa3.85□□□□□ -1.79
SHE2YKL130C YGL140CP53120 1219 aa3.85□□□□□ -1.79
SHE2YKL130C SGD1Q06132 899 aa3.85□□□□□ -1.79
SHE2YKL130C TUB2P02557 457 aaKnown RBP3.84□□□□□ -1.79
SHE2YKL130C KIP1P28742 1111 aa3.84□□□□□ -1.79
SHE2YKL130C CTS1P29029 562 aa3.84□□□□□ -1.79
SHE2YKL130C RDH54P38086 958 aa3.84□□□□□ -1.79
SHE2YKL130C GPB2P39717 880 aa3.84□□□□□ -1.79
SHE2YKL130C ADI1Q03677 179 aa3.84□□□□□ -1.79
SHE2YKL130C EST2Q06163 884 aa3.84□□□□□ -1.79
SHE2YKL130C RCL1Q08096 367 aaPredicted RBP3.84□□□□□ -1.79
SHE2YKL130C RSB1Q08417 382 aa3.84□□□□□ -1.79
SHE2YKL130C CYC1P00044 109 aaPredicted RBP3.83□□□□□ -1.8
SHE2YKL130C DED1P06634 604 aaKnown RBP3.83□□□□□ -1.8
SHE2YKL130C LAM1P38851 1228 aa3.83□□□□□ -1.8
SHE2YKL130C MPT5P39016 859 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SHE2YKL130C MEF2P39677 819 aa3.83□□□□□ -1.8
SHE2YKL130C DAK2P43550 591 aa3.83□□□□□ -1.8
SHE2YKL130C TNA1P53322 534 aa3.83□□□□□ -1.8
SHE2YKL130C HOS3Q02959 697 aaKnown RBP3.83□□□□□ -1.8
SHE2YKL130C PTC5Q12511 572 aa3.83□□□□□ -1.8
SHE2YKL130C TAT2P38967 592 aa3.82□□□□□ -1.8
SHE2YKL130C SEC26P41810 973 aaKnown RBP3.82□□□□□ -1.8
SHE2YKL130C THI12P42883 340 aa3.82□□□□□ -1.8
SHE2YKL130C THI5P43534 340 aa3.82□□□□□ -1.8
SHE2YKL130C THI11P47183 340 aa3.82□□□□□ -1.8
SHE2YKL130C HNT2P49775 206 aa3.82□□□□□ -1.8
SHE2YKL130C GCN5Q03330 439 aa3.82□□□□□ -1.8
SHE2YKL130C ROT1Q03691 256 aa3.82□□□□□ -1.8
SHE2YKL130C YDR132CQ03900 495 aa3.82□□□□□ -1.8
SHE2YKL130C TOS4Q06266 489 aa3.82□□□□□ -1.8
SHE2YKL130C THI13Q07748 340 aa3.82□□□□□ -1.8
SHE2YKL130C HEM13P11353 328 aaKnown RBP3.81□□□□□ -1.8
SHE2YKL130C PUF4P25339 888 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SHE2YKL130C MET4P32389 672 aa3.81□□□□□ -1.8
SHE2YKL130C AFG2P32794 780 aa3.81□□□□□ -1.8
SHE2YKL130C ALG3P38179 458 aa3.81□□□□□ -1.8
SHE2YKL130C YPL109CQ02981 657 aa3.81□□□□□ -1.8
SHE2YKL130C SEC23P15303 768 aaKnown RBP3.8□□□□□ -1.8
SHE2YKL130C FAA3P39002 694 aa3.8□□□□□ -1.8
SHE2YKL130C PIK1P39104 1066 aa3.8□□□□□ -1.8
SHE2YKL130C SPO21Q12411 609 aa3.8□□□□□ -1.8
SHE2YKL130C PNS1Q12412 539 aa3.8□□□□□ -1.8
SHE2YKL130C BAP2P38084 609 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms