RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	PRE9	P23638	258 aa	Known RBP	5.62	□□□□□ -1.51
SWD2	YKL018W	ADP1	P25371	1049 aa		5.62	□□□□□ -1.51
SWD2	YKL018W	FAA3	P39002	694 aa		5.62	□□□□□ -1.51
SWD2	YKL018W	UBP5	P39944	805 aa		5.62	□□□□□ -1.51
SWD2	YKL018W	TRE1	Q08919	783 aa		5.62	□□□□□ -1.51
SWD2	YKL018W	RET1	P22276	1149 aa	Known RBP	5.61	□□□□□ -1.51
SWD2	YKL018W	OYE3	P41816	400 aa	Predicted RBP	5.61	□□□□□ -1.51
SWD2	YKL018W	MRPS18	P42847	217 aa		5.61	□□□□□ -1.51
SWD2	YKL018W	YPL109C	Q02981	657 aa		5.61	□□□□□ -1.51
SWD2	YKL018W	YLR257W	Q06146	321 aa	Known RBP	5.61	□□□□□ -1.51
SWD2	YKL018W	TOS4	Q06266	489 aa		5.61	□□□□□ -1.51
SWD2	YKL018W	YVC1	Q12324	675 aa		5.61	□□□□□ -1.51
SWD2	YKL018W	HXK1	P04806	485 aa	Known RBP	5.6	□□□□□ -1.51
SWD2	YKL018W	PRO1	P32264	428 aa		5.6	□□□□□ -1.51
SWD2	YKL018W	ADD66	P36040	267 aa		5.6	□□□□□ -1.51
SWD2	YKL018W	POL12	P38121	705 aa	Predicted RBP	5.6	□□□□□ -1.51
SWD2	YKL018W	NMD3	P38861	518 aa	Known RBP	5.6	□□□□□ -1.51
SWD2	YKL018W	PUS7	Q08647	676 aa	Known RBP	5.6	□□□□□ -1.51
SWD2	YKL018W	HRK1	Q08732	759 aa	Known RBP	5.6	□□□□□ -1.51
SWD2	YKL018W	DED1	P06634	604 aa	Known RBP	5.59	□□□□□ -1.51
SWD2	YKL018W	YGL140C	P53120	1219 aa		5.59	□□□□□ -1.51
SWD2	YKL018W	YGR122W	P53272	402 aa		5.59	□□□□□ -1.51
SWD2	YKL018W	SSY1	Q03770	852 aa		5.59	□□□□□ -1.51
SWD2	YKL018W	MCD1	Q12158	566 aa		5.59	□□□□□ -1.51
SWD2	YKL018W	HEM3	P28789	327 aa		5.58	□□□□□ -1.52
SWD2	YKL018W	HSP78	P33416	811 aa		5.58	□□□□□ -1.52
SWD2	YKL018W	RPS26A	P39938	119 aa	Known RBP	5.58	□□□□□ -1.52
SWD2	YKL018W	RPS26B	P39939	119 aa	Known RBP	5.58	□□□□□ -1.52
SWD2	YKL018W	RSA3	Q05942	220 aa	Known RBP	5.58	□□□□□ -1.52
SWD2	YKL018W	EST2	Q06163	884 aa		5.58	□□□□□ -1.52
SWD2	YKL018W	PTC7	P38797	343 aa		5.57	□□□□□ -1.52
SWD2	YKL018W	VPS53	P47061	822 aa		5.57	□□□□□ -1.52
SWD2	YKL018W	RKM2	Q03942	479 aa		5.57	□□□□□ -1.52
SWD2	YKL018W	SEA4	P38164	1038 aa		5.56	□□□□□ -1.52
SWD2	YKL018W	YHL012W	P38709	493 aa		5.56	□□□□□ -1.52
SWD2	YKL018W	GTS1	P40956	396 aa		5.56	□□□□□ -1.52
SWD2	YKL018W	FOL2	P51601	243 aa	Known RBP	5.56	□□□□□ -1.52
SWD2	YKL018W	DFG16	Q99234	619 aa		5.56	□□□□□ -1.52
SWD2	YKL018W	RAD2	P07276	1031 aa		5.55	□□□□□ -1.52
SWD2	YKL018W	PEP7	P32609	515 aa		5.55	□□□□□ -1.52
SWD2	YKL018W	QNS1	P38795	714 aa	Known RBP	5.55	□□□□□ -1.52
SWD2	YKL018W	ECL1	P48235	211 aa		5.55	□□□□□ -1.52
SWD2	YKL018W	SEC23	P15303	768 aa	Known RBP	5.54	□□□□□ -1.52
SWD2	YKL018W	ASF1	P32447	279 aa		5.54	□□□□□ -1.52
SWD2	YKL018W	LRG1	P35688	1017 aa		5.54	□□□□□ -1.52
SWD2	YKL018W	RDH54	P38086	958 aa		5.54	□□□□□ -1.52
SWD2	YKL018W	PEX7	P39108	375 aa		5.54	□□□□□ -1.52
SWD2	YKL018W	PIC2	P40035	300 aa		5.54	□□□□□ -1.52
SWD2	YKL018W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.54	□□□□□ -1.52	RIP-Chip
SWD2	YKL018W	PTC5	Q12511	572 aa		5.54	□□□□□ -1.52
SWD2	YKL018W	TAF13	P11747	167 aa		5.53	□□□□□ -1.52
SWD2	YKL018W	CYC8	P14922	966 aa		5.53	□□□□□ -1.52
SWD2	YKL018W	ATE1	P16639	503 aa		5.53	□□□□□ -1.52
SWD2	YKL018W	MCM2	P29469	868 aa		5.53	□□□□□ -1.52
SWD2	YKL018W	SEG2	P34250	1132 aa		5.53	□□□□□ -1.52
SWD2	YKL018W	YJL045W	P47052	634 aa		5.53	□□□□□ -1.52
SWD2	YKL018W	NOP8	Q08287	484 aa	Predicted RBP	5.53	□□□□□ -1.52
SWD2	YKL018W	YCR015C	P25616	317 aa		5.52	□□□□□ -1.53
SWD2	YKL018W	MDL2	P33311	773 aa		5.52	□□□□□ -1.53
SWD2	YKL018W	PRP43	P53131	767 aa	Known RBP	5.52	□□□□□ -1.53
SWD2	YKL018W	MRL1	Q06815	381 aa		5.52	□□□□□ -1.53
SWD2	YKL018W	NBA1	Q08229	501 aa	Known RBP	5.52	□□□□□ -1.53
SWD2	YKL018W	AIM26	P32858	118 aa		5.51	□□□□□ -1.53
SWD2	YKL018W	YKL222C	P35995	705 aa		5.51	□□□□□ -1.53
SWD2	YKL018W	SPR28	Q04921	423 aa		5.51	□□□□□ -1.53
SWD2	YKL018W	HDA2	Q06629	674 aa		5.51	□□□□□ -1.53
SWD2	YKL018W	COQ4	O13525	335 aa		5.5	□□□□□ -1.53
SWD2	YKL018W	HEM13	P11353	328 aa	Known RBP	5.5	□□□□□ -1.53
SWD2	YKL018W	GAS1	P22146	559 aa	Known RBP	5.5	□□□□□ -1.53
SWD2	YKL018W	RNQ1	P25367	405 aa		5.5	□□□□□ -1.53
SWD2	YKL018W	YJR107W	P47145	328 aa		5.5	□□□□□ -1.53
SWD2	YKL018W	RAD27	P26793	382 aa		5.49	□□□□□ -1.53
SWD2	YKL018W	KIP1	P28742	1111 aa		5.49	□□□□□ -1.53
SWD2	YKL018W	SEC8	P32855	1065 aa		5.49	□□□□□ -1.53
SWD2	YKL018W	ALG3	P38179	458 aa		5.49	□□□□□ -1.53
SWD2	YKL018W	ESF1	Q06344	628 aa	Known RBP	5.49	□□□□□ -1.53
SWD2	YKL018W	SAM35	P14693	329 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	SRO9	P25567	434 aa	Known RBP	5.48	□□□□□ -1.53
SWD2	YKL018W	YSC84	P32793	468 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	CCZ1	P38273	704 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	GPB2	P39717	880 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	ORC3	P54790	616 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	ROD1	Q02805	837 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	RSB1	Q08417	382 aa		5.48	□□□□□ -1.53
SWD2	YKL018W	LPX1	Q12405	387 aa	Known RBP	5.48	□□□□□ -1.53
SWD2	YKL018W	AFG2	P32794	780 aa		5.47	□□□□□ -1.53
SWD2	YKL018W	NIT1	P40447	199 aa		5.47	□□□□□ -1.53
SWD2	YKL018W	FYV10	P40492	516 aa		5.47	□□□□□ -1.53
SWD2	YKL018W	SIW14	P53965	281 aa		5.47	□□□□□ -1.53
SWD2	YKL018W	HOS3	Q02959	697 aa	Known RBP	5.47	□□□□□ -1.53
SWD2	YKL018W	OYE2	Q03558	400 aa	Known RBP	5.47	□□□□□ -1.53
SWD2	YKL018W	SPO21	Q12411	609 aa		5.47	□□□□□ -1.53
SWD2	YKL018W	SPS1	P08458	490 aa		5.46	□□□□□ -1.54
SWD2	YKL018W	TNA1	P53322	534 aa		5.46	□□□□□ -1.54
SWD2	YKL018W	RAT1	Q02792	1006 aa	Known RBP	5.46	□□□□□ -1.54
SWD2	YKL018W	YOR352W	Q08816	343 aa		5.46	□□□□□ -1.54
SWD2	YKL018W	YPL260W	Q08977	551 aa		5.46	□□□□□ -1.54
SWD2	YKL018W	GCR1	P07261	785 aa		5.45	□□□□□ -1.54
SWD2	YKL018W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
SWD2	YKL018W	MKK2	P32491	506 aa		5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 143.9 ms