RNA–Protein interactions for RNA: YJL208C

NUC1, Transcript of Major mitochondrial nuclease, yeast

Gene NUC1, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUC1	YJL208C	SNF7	P39929	240 aa	Known RBP	10.35	□□□□□ -0.75
NUC1	YJL208C	GET3	Q12154	354 aa	Known RBP	10.35	□□□□□ -0.75
NUC1	YJL208C	TIP41	Q12199	356 aa		10.35	□□□□□ -0.75
NUC1	YJL208C	ROX1	P25042	368 aa		10.34	□□□□□ -0.75
NUC1	YJL208C	RDS1	P25611	832 aa		10.34	□□□□□ -0.75
NUC1	YJL208C	RSM25	P40496	264 aa		10.34	□□□□□ -0.75
NUC1	YJL208C	DJP1	P40564	432 aa		10.34	□□□□□ -0.75
NUC1	YJL208C	NET1	P47035	1189 aa		10.34	□□□□□ -0.75
NUC1	YJL208C	NBL1	Q3E7Y6	73 aa		10.34	□□□□□ -0.75
NUC1	YJL208C	PWP2	P25635	923 aa	Known RBP	10.33	□□□□□ -0.76
NUC1	YJL208C	RFT1	P38206	574 aa	Predicted RBP	10.33	□□□□□ -0.76
NUC1	YJL208C	YGL081W	P53156	320 aa		10.33	□□□□□ -0.76
NUC1	YJL208C	RTC4	P53850	401 aa		10.33	□□□□□ -0.76
NUC1	YJL208C	YML037C	Q03703	340 aa		10.33	□□□□□ -0.76
NUC1	YJL208C	RPL22A	P05749	121 aa	Known RBP	10.32	□□□□□ -0.76
NUC1	YJL208C	CDC6	P09119	513 aa		10.32	□□□□□ -0.76
NUC1	YJL208C	SRO9	P25567	434 aa	Known RBP	10.32	□□□□□ -0.76
NUC1	YJL208C	YKR018C	P36114	725 aa		10.32	□□□□□ -0.76
NUC1	YJL208C	CCT5	P40413	562 aa	Known RBP	10.32	□□□□□ -0.76
NUC1	YJL208C	RET3	P53600	189 aa		10.32	□□□□□ -0.76
NUC1	YJL208C	YAF9	P53930	226 aa		10.32	□□□□□ -0.76
NUC1	YJL208C	DCS2	Q12123	353 aa		10.32	□□□□□ -0.76
NUC1	YJL208C	HXK1	P04806	485 aa	Known RBP	10.31	□□□□□ -0.76
NUC1	YJL208C	MCM3	P24279	971 aa	Known RBP	10.31	□□□□□ -0.76
NUC1	YJL208C	PHO88	P38264	188 aa	Predicted RBP	10.31	□□□□□ -0.76
NUC1	YJL208C	PNT1	P38969	423 aa		10.31	□□□□□ -0.76
NUC1	YJL208C	CIR1	P42940	261 aa		10.31	□□□□□ -0.76
NUC1	YJL208C	BNI5	P53890	448 aa	Known RBP	10.31	□□□□□ -0.76
NUC1	YJL208C	UTP4	Q06679	776 aa	Known RBP	10.31	□□□□□ -0.76
NUC1	YJL208C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.31	□□□□□ -0.76	not detected
NUC1	YJL208C	HVG1	P0CE11	249 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	KRS1	P15180	591 aa	Known RBP	10.3	□□□□□ -0.76
NUC1	YJL208C	THR4	P16120	514 aa	Known RBP	10.3	□□□□□ -0.76
NUC1	YJL208C	ALG1	P16661	449 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	MCD4	P36051	919 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	RSC30	P38781	883 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	RBA50	Q04418	439 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	CST9	Q06032	482 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	YOR296W	Q08748	1289 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	DDP1	Q99321	188 aa	Known RBP	10.3	□□□□□ -0.76
NUC1	YJL208C	TOM1	Q03280	3268 aa		10.3	□□□□□ -0.76
NUC1	YJL208C	FKS1	P38631	1876 aa	Known RBP	10.3	□□□□□ -0.76
NUC1	YJL208C	RAD18	P10862	487 aa		10.29	□□□□□ -0.76
NUC1	YJL208C	STI1	P15705	589 aa	Known RBP RIP-Chip data	10.29	□□□□□ -0.76	not detected
NUC1	YJL208C	ARL1	P38116	183 aa	Known RBP	10.29	□□□□□ -0.76
NUC1	YJL208C	GPB2	P39717	880 aa		10.29	□□□□□ -0.76
NUC1	YJL208C	ALD6	P54115	500 aa	Known RBP	10.29	□□□□□ -0.76
NUC1	YJL208C	CSM3	Q04659	317 aa		10.29	□□□□□ -0.76
NUC1	YJL208C	FBP1	P09201	348 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	RGP1	P16664	663 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	MBR1	P23493	339 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	YJL007C	P47080	104 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	ASE1	P50275	885 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	CUE3	P53137	624 aa	Known RBP	10.28	□□□□□ -0.76
NUC1	YJL208C	PEX29	Q03370	554 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	GIS4	Q04233	774 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	CSC1	Q06538	782 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	UBX5	Q06682	500 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	GUD1	Q07729	489 aa		10.28	□□□□□ -0.76
NUC1	YJL208C	CFT2	Q12102	859 aa	Predicted RBP	10.28	□□□□□ -0.76
NUC1	YJL208C	TY1B-A	O13527	1196 aa	Known RBP	10.27	□□□□□ -0.77
NUC1	YJL208C	VPS1	P21576	704 aa	Known RBP	10.27	□□□□□ -0.77
NUC1	YJL208C	YDJ1	P25491	409 aa	Known RBP	10.27	□□□□□ -0.77
NUC1	YJL208C	YKT6	P36015	200 aa	Known RBP	10.27	□□□□□ -0.77
NUC1	YJL208C	ETP1	P38748	585 aa	Known RBP	10.27	□□□□□ -0.77
NUC1	YJL208C	PAN5	P38787	379 aa		10.27	□□□□□ -0.77
NUC1	YJL208C	FMS1	P50264	508 aa		10.27	□□□□□ -0.77
NUC1	YJL208C	FRS2	P15625	503 aa	Known RBP	10.26	□□□□□ -0.77
NUC1	YJL208C	STT3	P39007	718 aa	Known RBP	10.26	□□□□□ -0.77
NUC1	YJL208C	RVS167	P39743	482 aa	Known RBP	10.26	□□□□□ -0.77
NUC1	YJL208C	LIF1	P53150	421 aa		10.26	□□□□□ -0.77
NUC1	YJL208C	DSE4	P53753	1117 aa		10.26	□□□□□ -0.77
NUC1	YJL208C	OYE2	Q03558	400 aa	Known RBP	10.26	□□□□□ -0.77
NUC1	YJL208C	SMD2	Q06217	110 aa	Known RBP	10.26	□□□□□ -0.77
NUC1	YJL208C	SLK19	Q08581	821 aa	Known RBP	10.26	□□□□□ -0.77
NUC1	YJL208C	CDC19	P00549	500 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	SES1	P07284	462 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	VMA2	P16140	517 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	PKC1	P24583	1151 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	CDC60	P26637	1090 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	URA1	P28272	314 aa	Predicted RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	BMH1	P29311	267 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	RPN12	P32496	274 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	TGL1	P34163	548 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	APE3	P37302	537 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	KRE33	P53914	1056 aa	Known RBP	10.25	□□□□□ -0.77
NUC1	YJL208C	MFM1	Q02783	413 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	SPH1	Q06160	661 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	SUE1	Q06524	206 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	TY3A-G	Q12173	290 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	TY3A-I	Q99219	290 aa		10.25	□□□□□ -0.77
NUC1	YJL208C	UGA4	P32837	571 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	SUL1	P38359	859 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	ERG7	P38604	731 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	SPR3	P41901	512 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	DAK2	P43550	591 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	YPT11	P48559	417 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	JIP4	Q03361	876 aa		10.24	□□□□□ -0.77
NUC1	YJL208C	BUL2	Q03758	920 aa	Known RBP	10.24	□□□□□ -0.77
NUC1	YJL208C	TRS120	Q04183	1289 aa		10.24	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms