RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C TRP2P00899 507 aaKnown RBP2.4□□□□□ -2.02
RTT101YJL047C VMA3P25515 160 aa2.4□□□□□ -2.02
RTT101YJL047C DUR3P33413 735 aa2.4□□□□□ -2.02
RTT101YJL047C HSP78P33416 811 aa2.4□□□□□ -2.02
RTT101YJL047C MRP8P35719 219 aa2.4□□□□□ -2.02
RTT101YJL047C APL2P36000 726 aaPredicted RBP2.4□□□□□ -2.02
RTT101YJL047C MUM2P38236 366 aa2.4□□□□□ -2.02
RTT101YJL047C RAD55P38953 406 aa2.4□□□□□ -2.02
RTT101YJL047C RRP8P38961 392 aaKnown RBP2.4□□□□□ -2.02
RTT101YJL047C HUL4P40985 892 aa2.4□□□□□ -2.02
RTT101YJL047C ALR2P43553 858 aa2.4□□□□□ -2.02
RTT101YJL047C RSC1P53236 928 aa2.4□□□□□ -2.02
RTT101YJL047C SDA1P53313 767 aaKnown RBP2.4□□□□□ -2.02
RTT101YJL047C KRE33P53914 1056 aaKnown RBP2.4□□□□□ -2.02
RTT101YJL047C YLR225CQ05948 407 aaKnown RBP2.4□□□□□ -2.02
RTT101YJL047C PSR1Q07800 427 aa2.4□□□□□ -2.02
RTT101YJL047C TIF6Q12522 245 aaKnown RBP2.4□□□□□ -2.02
RTT101YJL047C NHA1Q99271 985 aa2.4□□□□□ -2.02
RTT101YJL047C HOM3P10869 527 aa2.4□□□□□ -2.03
RTT101YJL047C TOP3P13099 656 aa2.4□□□□□ -2.03
RTT101YJL047C GFD2P25370 566 aaKnown RBP2.4□□□□□ -2.03
RTT101YJL047C TFC3P34111 1160 aa2.4□□□□□ -2.03
RTT101YJL047C TYS1P36421 394 aaKnown RBP2.4□□□□□ -2.03
RTT101YJL047C BAP2P38084 609 aa2.4□□□□□ -2.03
RTT101YJL047C RKM3P38222 552 aa2.4□□□□□ -2.03
RTT101YJL047C ESL1P40456 1118 aa2.4□□□□□ -2.03
RTT101YJL047C RSC8P43609 557 aaKnown RBP2.4□□□□□ -2.03
RTT101YJL047C UTP8P53276 713 aaKnown RBP2.4□□□□□ -2.03
RTT101YJL047C SHE9Q04172 456 aa2.4□□□□□ -2.03
RTT101YJL047C IRC3Q06683 689 aa2.4□□□□□ -2.03
RTT101YJL047C REH1Q06709 432 aa2.4□□□□□ -2.03
RTT101YJL047C GRC3Q07845 632 aa2.4□□□□□ -2.03
RTT101YJL047C SSP2Q08646 371 aa2.4□□□□□ -2.03
RTT101YJL047C TRE2Q08693 809 aa2.4□□□□□ -2.03
RTT101YJL047C HEM13P11353 328 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C PTP2P29461 750 aa2.39□□□□□ -2.03
RTT101YJL047C DBF20P32328 564 aa2.39□□□□□ -2.03
RTT101YJL047C MCM10P32354 571 aa2.39□□□□□ -2.03
RTT101YJL047C ECM32P32644 1121 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C MOT2P34909 587 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C TRZ1P36159 838 aaPredicted RBP2.39□□□□□ -2.03
RTT101YJL047C DSS1P39112 969 aa2.39□□□□□ -2.03
RTT101YJL047C HXT13P39924 564 aa2.39□□□□□ -2.03
RTT101YJL047C MNT3P40549 630 aa2.39□□□□□ -2.03
RTT101YJL047C HXT17P53631 564 aa2.39□□□□□ -2.03
RTT101YJL047C HXT15P54854 567 aa2.39□□□□□ -2.03
RTT101YJL047C CTR9P89105 1077 aa2.39□□□□□ -2.03
RTT101YJL047C MTQ2Q03920 221 aaPredicted RBP2.39□□□□□ -2.03
RTT101YJL047C GIC2Q06648 383 aa2.39□□□□□ -2.03
RTT101YJL047C VIP1Q06685 1146 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C YDR056CQ12025 205 aa2.39□□□□□ -2.03
RTT101YJL047C CDC31P06704 161 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C URA1P28272 314 aaPredicted RBP2.39□□□□□ -2.03
RTT101YJL047C SBA1P28707 216 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C GCD11P32481 527 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C UTR2P32623 467 aa2.39□□□□□ -2.03
RTT101YJL047C NPL4P33755 580 aa2.39□□□□□ -2.03
RTT101YJL047C MGS1P40151 587 aa2.39□□□□□ -2.03
RTT101YJL047C PSY2P40164 858 aa2.39□□□□□ -2.03
RTT101YJL047C ERR3P42222 437 aa2.39□□□□□ -2.03
RTT101YJL047C HXT10P43581 546 aa2.39□□□□□ -2.03
RTT101YJL047C MTR4P47047 1073 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C APP1P53933 587 aa2.39□□□□□ -2.03
RTT101YJL047C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
RTT101YJL047C YPQ2Q06328 317 aa2.39□□□□□ -2.03
RTT101YJL047C TMA46Q12000 345 aaKnown RBP2.39□□□□□ -2.03
RTT101YJL047C RTP1Q12751 981 aa2.39□□□□□ -2.03
RTT101YJL047C MDM12Q92328 271 aa2.39□□□□□ -2.03
RTT101YJL047C MSN1P22148 382 aa2.38□□□□□ -2.03
RTT101YJL047C VBA3P25594 458 aa2.38□□□□□ -2.03
RTT101YJL047C DAL3P32459 195 aa2.38□□□□□ -2.03
RTT101YJL047C SPT16P32558 1035 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C NIC96P34077 839 aa2.38□□□□□ -2.03
RTT101YJL047C RER2P35196 286 aa2.38□□□□□ -2.03
RTT101YJL047C JNM1P36224 373 aa2.38□□□□□ -2.03
RTT101YJL047C PBY1P38254 753 aa2.38□□□□□ -2.03
RTT101YJL047C APM2P38700 605 aa2.38□□□□□ -2.03
RTT101YJL047C YHL041WP38730 149 aa2.38□□□□□ -2.03
RTT101YJL047C MBP1P39678 833 aa2.38□□□□□ -2.03
RTT101YJL047C GEM1P39722 662 aa2.38□□□□□ -2.03
RTT101YJL047C GPP2P40106 250 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C NTA1P40354 457 aa2.38□□□□□ -2.03
RTT101YJL047C ALA1P40825 983 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C YDL124WQ07551 312 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C RRP6Q12149 733 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C HBN1Q96VH4 193 aa2.38□□□□□ -2.03
RTT101YJL047C KAR2P16474 682 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C PRP5P21372 849 aaPredicted RBP2.38□□□□□ -2.03
RTT101YJL047C KCC4P25389 1037 aa2.38□□□□□ -2.03
RTT101YJL047C LYP1P32487 611 aa2.38□□□□□ -2.03
RTT101YJL047C HBS1P32769 611 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C SPT23P35210 1082 aa2.38□□□□□ -2.03
RTT101YJL047C IRS4P36115 615 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C ABZ1P37254 787 aaPredicted RBP2.38□□□□□ -2.03
RTT101YJL047C CCC2P38995 1004 aa2.38□□□□□ -2.03
RTT101YJL047C RRD1P40454 393 aaKnown RBP2.38□□□□□ -2.03
RTT101YJL047C TAF1P46677 1066 aa2.38□□□□□ -2.03
RTT101YJL047C KXD1P53158 218 aa2.38□□□□□ -2.03
RTT101YJL047C HEH2Q03281 663 aa2.38□□□□□ -2.03
RTT101YJL047C SXM1Q04175 944 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms