RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W UBP12P39538 1254 aa8.35□□□□□ -1.07
YRF1-1YDR545W COG6P53959 839 aa8.35□□□□□ -1.07
YRF1-1YDR545W ALO1P54783 526 aaKnown RBP8.35□□□□□ -1.07
YRF1-1YDR545W MRE11P32829 692 aa8.35□□□□□ -1.07
YRF1-1YDR545W ADA2Q02336 434 aa8.35□□□□□ -1.07
YRF1-1YDR545W HMI1Q12039 706 aa8.35□□□□□ -1.07
YRF1-1YDR545W MEC3Q02574 474 aa8.35□□□□□ -1.07
YRF1-1YDR545W FAR8Q05040 523 aa8.35□□□□□ -1.07
YRF1-1YDR545W LPD1P09624 499 aaKnown RBP8.35□□□□□ -1.07
YRF1-1YDR545W PWP1P21304 576 aaKnown RBP8.35□□□□□ -1.07
YRF1-1YDR545W STR2P47164 639 aa8.35□□□□□ -1.07
YRF1-1YDR545W DSL1P53847 754 aa8.35□□□□□ -1.07
YRF1-1YDR545W ERG5P54781 538 aa8.35□□□□□ -1.07
YRF1-1YDR545W CCT2P39076 527 aaKnown RBP8.34□□□□□ -1.07
YRF1-1YDR545W ATG17Q06410 417 aa8.34□□□□□ -1.07
YRF1-1YDR545W TAF10Q12030 206 aa8.34□□□□□ -1.07
YRF1-1YDR545W TOA1P32773 286 aa8.34□□□□□ -1.07
YRF1-1YDR545W TFG1P41895 735 aaPredicted RBP8.34□□□□□ -1.07
YRF1-1YDR545W NDL1Q06568 189 aa8.34□□□□□ -1.07
YRF1-1YDR545W CPR6P53691 371 aaKnown RBP8.34□□□□□ -1.07
YRF1-1YDR545W TDA11P38854 504 aa8.34□□□□□ -1.08
YRF1-1YDR545W RTC4P53850 401 aa8.34□□□□□ -1.08
YRF1-1YDR545W ESF2P53743 316 aaKnown RBP8.33□□□□□ -1.08
YRF1-1YDR545W TRS120Q04183 1289 aa8.33□□□□□ -1.08
YRF1-1YDR545W EST2Q06163 884 aa8.33□□□□□ -1.08
YRF1-1YDR545W PDB1P32473 366 aaKnown RBP8.33□□□□□ -1.08
YRF1-1YDR545W CBF2P32504 956 aa8.33□□□□□ -1.08
YRF1-1YDR545W ASI1P54074 624 aa8.33□□□□□ -1.08
YRF1-1YDR545W SEY1Q99287 776 aa8.33□□□□□ -1.08
YRF1-1YDR545W RPC82P32349 654 aa8.33□□□□□ -1.08
YRF1-1YDR545W HEK2P38199 381 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
YRF1-1YDR545W AIM20P40451 204 aa8.33□□□□□ -1.08
YRF1-1YDR545W SHQ1P40486 507 aaPredicted RBP8.33□□□□□ -1.08
YRF1-1YDR545W RPC17P47076 161 aa8.33□□□□□ -1.08
YRF1-1YDR545W GLE1Q12315 538 aa8.33□□□□□ -1.08
YRF1-1YDR545W MPH3P0CE00 602 aa8.33□□□□□ -1.08
YRF1-1YDR545W VAN1P23642 535 aa8.33□□□□□ -1.08
YRF1-1YDR545W VPS53P47061 822 aa8.33□□□□□ -1.08
YRF1-1YDR545W TFB2Q02939 513 aa8.33□□□□□ -1.08
YRF1-1YDR545W STE13P33894 931 aa8.32□□□□□ -1.08
YRF1-1YDR545W DCS2Q12123 353 aa8.32□□□□□ -1.08
YRF1-1YDR545W TOM70P07213 617 aaKnown RBP8.32□□□□□ -1.08
YRF1-1YDR545W YET1P35723 206 aa8.32□□□□□ -1.08
YRF1-1YDR545W RPN10P38886 268 aaKnown RBP8.32□□□□□ -1.08
YRF1-1YDR545W TSR2Q06672 205 aaKnown RBP8.32□□□□□ -1.08
YRF1-1YDR545W PRT1P06103 763 aaKnown RBP8.32□□□□□ -1.08
YRF1-1YDR545W OPI1P21957 404 aa8.32□□□□□ -1.08
YRF1-1YDR545W SEC66P33754 206 aa8.32□□□□□ -1.08
YRF1-1YDR545W IAH1P41734 238 aa8.32□□□□□ -1.08
YRF1-1YDR545W SLP1Q12232 587 aa8.32□□□□□ -1.08
YRF1-1YDR545W OM45P16547 393 aa8.31□□□□□ -1.08
YRF1-1YDR545W CHS5Q12114 671 aaKnown RBP8.31□□□□□ -1.08
YRF1-1YDR545W LAS1P36146 502 aaPredicted RBP8.31□□□□□ -1.08
YRF1-1YDR545W NCS2P53923 493 aaPredicted RBP8.31□□□□□ -1.08
YRF1-1YDR545W ALE1Q08548 619 aa8.31□□□□□ -1.08
YRF1-1YDR545W UBP6P43593 499 aaKnown RBP8.31□□□□□ -1.08
YRF1-1YDR545W TYR1P20049 452 aa8.31□□□□□ -1.08
YRF1-1YDR545W VTI1Q04338 217 aa8.31□□□□□ -1.08
YRF1-1YDR545W RIO1Q12196 484 aaKnown RBP8.31□□□□□ -1.08
YRF1-1YDR545W POL3P15436 1097 aa8.3□□□□□ -1.08
YRF1-1YDR545W SMY1P32364 656 aaKnown RBP8.3□□□□□ -1.08
YRF1-1YDR545W MET4P32389 672 aa8.3□□□□□ -1.08
YRF1-1YDR545W GCN20P43535 752 aaKnown RBP8.3□□□□□ -1.08
YRF1-1YDR545W UME1Q03010 460 aa8.3□□□□□ -1.08
YRF1-1YDR545W BUG1Q12191 341 aa8.3□□□□□ -1.08
YRF1-1YDR545W OAF3P36023 863 aa8.3□□□□□ -1.08
YRF1-1YDR545W FES1P38260 290 aa8.3□□□□□ -1.08
YRF1-1YDR545W VHS3Q08438 674 aa8.3□□□□□ -1.08
YRF1-1YDR545W SLA1P32790 1244 aa8.3□□□□□ -1.08
YRF1-1YDR545W LHS1P36016 881 aa8.3□□□□□ -1.08
YRF1-1YDR545W ECM4P36156 370 aa8.3□□□□□ -1.08
YRF1-1YDR545W ZDS2P54786 942 aa8.3□□□□□ -1.08
YRF1-1YDR545W GNT1Q12096 491 aa8.3□□□□□ -1.08
YRF1-1YDR545W SUI3P09064 285 aaKnown RBP8.3□□□□□ -1.08
YRF1-1YDR545W REC107P21651 314 aa8.3□□□□□ -1.08
YRF1-1YDR545W MCM4P30665 933 aaKnown RBP8.3□□□□□ -1.08
YRF1-1YDR545W JNM1P36224 373 aa8.3□□□□□ -1.08
YRF1-1YDR545W PTC4P38089 393 aa8.3□□□□□ -1.08
YRF1-1YDR545W YML119WQ03208 357 aa8.3□□□□□ -1.08
YRF1-1YDR545W GTB1Q04924 702 aa8.3□□□□□ -1.08
YRF1-1YDR545W BMH1P29311 267 aaKnown RBP8.29□□□□□ -1.08
YRF1-1YDR545W DSF2P38213 736 aa8.29□□□□□ -1.08
YRF1-1YDR545W BOP3P53958 396 aa8.29□□□□□ -1.08
YRF1-1YDR545W SPP382Q06411 708 aaPredicted RBP8.29□□□□□ -1.08
YRF1-1YDR545W SMC1P32908 1225 aa8.29□□□□□ -1.08
YRF1-1YDR545W MET1P36150 593 aa8.29□□□□□ -1.08
YRF1-1YDR545W VID27P40157 782 aa8.29□□□□□ -1.08
YRF1-1YDR545W YNR029CP53729 429 aaKnown RBP8.29□□□□□ -1.08
YRF1-1YDR545W YPL109CQ02981 657 aa8.29□□□□□ -1.08
YRF1-1YDR545W SPN1Q06505 410 aaPredicted RBP8.29□□□□□ -1.08
YRF1-1YDR545W YDR306CQ06640 478 aa8.29□□□□□ -1.08
YRF1-1YDR545W YLR001CQ07895 862 aa8.29□□□□□ -1.08
YRF1-1YDR545W SPO12P17123 173 aa8.29□□□□□ -1.08
YRF1-1YDR545W NIP100P33420 868 aa8.29□□□□□ -1.08
YRF1-1YDR545W NOP9P47077 666 aaKnown RBP8.29□□□□□ -1.08
YRF1-1YDR545W PRP43P53131 767 aaKnown RBP8.29□□□□□ -1.08
YRF1-1YDR545W DPL1Q05567 589 aa8.29□□□□□ -1.08
YRF1-1YDR545W YLL054CQ12244 843 aa8.29□□□□□ -1.08
YRF1-1YDR545W RPS6AP0CX37 236 aaKnown RBP8.29□□□□□ -1.08
YRF1-1YDR545W RPS6BP0CX38 236 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 626.8 ms