RNA–Protein interactions for RNA: YDR225W

HTA1, Transcript of Histone H2A, yeast

Gene HTA1, Length 399 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTA1	YDR225W	RGP1	P16664	663 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	MSH3	P25336	1018 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	HUL4	P40985	892 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	ENT3	P47160	408 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	UBP15	P50101	1230 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	RTA1	P53047	317 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	NTG2	Q08214	380 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	REC8	Q12188	680 aa		4.22	□□□□□ -1.73
HTA1	YDR225W	RPL8A	P17076	256 aa	Known RBP	4.21	□□□□□ -1.74
HTA1	YDR225W	GRX7	P38068	203 aa		4.21	□□□□□ -1.74
HTA1	YDR225W	RDH54	P38086	958 aa		4.21	□□□□□ -1.74
HTA1	YDR225W	SHU2	P38957	223 aa		4.21	□□□□□ -1.74
HTA1	YDR225W	TAF8	Q03750	510 aa		4.21	□□□□□ -1.74
HTA1	YDR225W	INO1	P11986	533 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HTA1	YDR225W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
HTA1	YDR225W	MRC1	P25588	1096 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	SFP1	P32432	683 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	PAF1	P38351	445 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	LYS5	P50113	272 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	ROD1	Q02805	837 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	GLO4	Q12320	285 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	DPH6	Q12429	685 aa		4.2	□□□□□ -1.74
HTA1	YDR225W	MOT2	P34909	587 aa	Known RBP	4.19	□□□□□ -1.74
HTA1	YDR225W	BET3	P36149	193 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	ENP1	P38333	483 aa	Known RBP	4.19	□□□□□ -1.74
HTA1	YDR225W	PMC1	P38929	1173 aa	Predicted RBP	4.19	□□□□□ -1.74
HTA1	YDR225W	YER156C	P40093	338 aa	Known RBP	4.19	□□□□□ -1.74
HTA1	YDR225W	ALR2	P43553	858 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	JJJ3	P47138	172 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	PPT1	P53043	513 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	FOL1	P53848	824 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	UGO1	Q03327	502 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	VPS72	Q03388	795 aa		4.19	□□□□□ -1.74
HTA1	YDR225W	YMR265C	Q03508	461 aa	Known RBP	4.19	□□□□□ -1.74
HTA1	YDR225W	FUS1	P11710	512 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	PRP9	P19736	530 aa	Known RBP	4.18	□□□□□ -1.74
HTA1	YDR225W	DIT1	P21623	536 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	VMA4	P22203	233 aa	Known RBP	4.18	□□□□□ -1.74
HTA1	YDR225W	MKK2	P32491	506 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	PEX6	P33760	1030 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
HTA1	YDR225W	YKL077W	P36081	392 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	NCL1	P38205	684 aa	Known RBP	4.18	□□□□□ -1.74
HTA1	YDR225W	EXO5	P38289	585 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	CEM1	P39525	442 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	GDH3	P39708	457 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	HSV2	P50079	448 aa	Predicted RBP	4.18	□□□□□ -1.74
HTA1	YDR225W	TFB2	Q02939	513 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	TIF35	Q04067	274 aa	Known RBP	4.18	□□□□□ -1.74
HTA1	YDR225W	EST2	Q06163	884 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	RSC2	Q06488	889 aa		4.18	□□□□□ -1.74
HTA1	YDR225W	BUD21	Q08492	214 aa	Predicted RBP	4.18	□□□□□ -1.74
HTA1	YDR225W	MBP1	P39678	833 aa		4.17	□□□□□ -1.74
HTA1	YDR225W	GEM1	P39722	662 aa		4.17	□□□□□ -1.74
HTA1	YDR225W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
HTA1	YDR225W	HLJ1	P48353	224 aa		4.17	□□□□□ -1.74
HTA1	YDR225W	MAL11	P53048	616 aa		4.17	□□□□□ -1.74
HTA1	YDR225W	ATG13	Q06628	738 aa		4.17	□□□□□ -1.74
HTA1	YDR225W	YDL124W	Q07551	312 aa	Known RBP	4.17	□□□□□ -1.74
HTA1	YDR225W	RKM4	Q12504	494 aa		4.17	□□□□□ -1.74
HTA1	YDR225W	HVG1	P0CE11	249 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	IDI1	P15496	288 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	SYP1	P25623	870 aa	Known RBP	4.16	□□□□□ -1.74
HTA1	YDR225W	MDJ1	P35191	511 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	MRPL16	P38064	232 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	AMN1	P38285	549 aa	Predicted RBP	4.16	□□□□□ -1.74
HTA1	YDR225W	YGL176C	P46945	554 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	MTR4	P47047	1073 aa	Known RBP	4.16	□□□□□ -1.74
HTA1	YDR225W	BIO5	P53744	561 aa	Known RBP	4.16	□□□□□ -1.74
HTA1	YDR225W	ADE12	P80210	433 aa	Known RBP	4.16	□□□□□ -1.74
HTA1	YDR225W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
HTA1	YDR225W	SYT1	Q06836	1226 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	YPL066W	Q12194	479 aa		4.16	□□□□□ -1.74
HTA1	YDR225W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
HTA1	YDR225W	DED1	P06634	604 aa	Known RBP	4.15	□□□□□ -1.75
HTA1	YDR225W	HTS1	P07263	546 aa	Known RBP	4.15	□□□□□ -1.75
HTA1	YDR225W	HBS1	P32769	611 aa	Known RBP	4.15	□□□□□ -1.75
HTA1	YDR225W	SEC6	P32844	805 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	YKL107W	P34251	309 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	TFA2	P36145	328 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	SNF7	P39929	240 aa	Known RBP	4.15	□□□□□ -1.75
HTA1	YDR225W	INP51	P40559	946 aa	Known RBP	4.15	□□□□□ -1.75
HTA1	YDR225W	CNN1	P43618	361 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	YJL181W	P46987	611 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	YJR124C	P47159	448 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	PMT3	P47190	753 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	YGR237C	P50089	785 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	PEX8	P53248	589 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	YNL193W	P53870	558 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	RAT1	Q02792	1006 aa	Known RBP	4.15	□□□□□ -1.75
HTA1	YDR225W	GIC2	Q06648	383 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	TMA17	Q12513	150 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	HBN1	Q96VH4	193 aa		4.15	□□□□□ -1.75
HTA1	YDR225W	RPP1A	P05318	106 aa	Predicted RBP	4.14	□□□□□ -1.75
HTA1	YDR225W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.14	□□□□□ -1.75
HTA1	YDR225W	TY1A-DR6	P0CX70	440 aa		4.14	□□□□□ -1.75
HTA1	YDR225W	TY1A-ER1	P0CX71	440 aa		4.14	□□□□□ -1.75
HTA1	YDR225W	TY1A-LR2	P0CX72	440 aa		4.14	□□□□□ -1.75
HTA1	YDR225W	TY1A-PL	P0CX73	440 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms