RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W AAD14P42884 376 aa5.84□□□□□ -1.47
UBC1YDR177W DAS1P47005 663 aa5.84□□□□□ -1.47
UBC1YDR177W VTC4P47075 721 aa5.84□□□□□ -1.47
UBC1YDR177W PEX8P53248 589 aa5.84□□□□□ -1.47
UBC1YDR177W ECM16Q04217 1267 aaKnown RBP5.84□□□□□ -1.47
UBC1YDR177W FAP7Q12055 197 aaPredicted RBP5.84□□□□□ -1.47
UBC1YDR177W CMR1Q12510 522 aaKnown RBP5.84□□□□□ -1.47
UBC1YDR177W TMA17Q12513 150 aa5.84□□□□□ -1.47
UBC1YDR177W SRF1Q12516 437 aa5.84□□□□□ -1.47
UBC1YDR177W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
UBC1YDR177W PRP5P21372 849 aaPredicted RBP5.83□□□□□ -1.48
UBC1YDR177W SYP1P25623 870 aaKnown RBP5.83□□□□□ -1.48
UBC1YDR177W GDH3P39708 457 aa5.83□□□□□ -1.48
UBC1YDR177W NIT1P40447 199 aa5.83□□□□□ -1.48
UBC1YDR177W MSB3P48566 633 aaPredicted RBP5.83□□□□□ -1.48
UBC1YDR177W SDA1P53313 767 aaKnown RBP5.83□□□□□ -1.48
UBC1YDR177W YNL193WP53870 558 aa5.83□□□□□ -1.48
UBC1YDR177W ALO1P54783 526 aaKnown RBP5.83□□□□□ -1.48
UBC1YDR177W UME1Q03010 460 aa5.83□□□□□ -1.48
UBC1YDR177W PSH1Q12161 406 aa5.83□□□□□ -1.48
UBC1YDR177W REC8Q12188 680 aa5.83□□□□□ -1.48
UBC1YDR177W DUR3P33413 735 aa5.82□□□□□ -1.48
UBC1YDR177W DSS1P39112 969 aa5.82□□□□□ -1.48
UBC1YDR177W HXT13P39924 564 aa5.82□□□□□ -1.48
UBC1YDR177W YER156CP40093 338 aaKnown RBP5.82□□□□□ -1.48
UBC1YDR177W YJL171CP46992 396 aa5.82□□□□□ -1.48
UBC1YDR177W HNT2P49775 206 aa5.82□□□□□ -1.48
UBC1YDR177W PPT1P53043 513 aa5.82□□□□□ -1.48
UBC1YDR177W RTA1P53047 317 aa5.82□□□□□ -1.48
UBC1YDR177W HXT17P53631 564 aa5.82□□□□□ -1.48
UBC1YDR177W HST3P53687 447 aa5.82□□□□□ -1.48
UBC1YDR177W HXT15P54854 567 aa5.82□□□□□ -1.48
UBC1YDR177W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
UBC1YDR177W EST2Q06163 884 aa5.82□□□□□ -1.48
UBC1YDR177W THI73Q07904 523 aa5.82□□□□□ -1.48
UBC1YDR177W TRE2Q08693 809 aa5.82□□□□□ -1.48
UBC1YDR177W THS1P04801 734 aaKnown RBP5.81□□□□□ -1.48
UBC1YDR177W MKK2P32491 506 aa5.81□□□□□ -1.48
UBC1YDR177W DOM34P33309 386 aa5.81□□□□□ -1.48
UBC1YDR177W MOT2P34909 587 aaKnown RBP5.81□□□□□ -1.48
UBC1YDR177W MCM7P38132 845 aa5.81□□□□□ -1.48
UBC1YDR177W CNN1P43618 361 aa5.81□□□□□ -1.48
UBC1YDR177W ROD1Q02805 837 aa5.81□□□□□ -1.48
UBC1YDR177W NKP1Q12493 238 aa5.81□□□□□ -1.48
UBC1YDR177W DED1P06634 604 aaKnown RBP5.8□□□□□ -1.48
UBC1YDR177W DBP5P20449 482 aaKnown RBP5.8□□□□□ -1.48
UBC1YDR177W NAB2P32505 525 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
UBC1YDR177W ADD66P36040 267 aa5.8□□□□□ -1.48
UBC1YDR177W BET3P36149 193 aa5.8□□□□□ -1.48
UBC1YDR177W RDH54P38086 958 aa5.8□□□□□ -1.48
UBC1YDR177W YGL176CP46945 554 aa5.8□□□□□ -1.48
UBC1YDR177W ATG16Q03818 150 aa5.8□□□□□ -1.48
UBC1YDR177W TIF35Q04067 274 aaKnown RBP5.8□□□□□ -1.48
UBC1YDR177W HFD1Q04458 532 aa5.8□□□□□ -1.48
UBC1YDR177W AIR2Q12476 344 aaKnown RBP5.8□□□□□ -1.48
UBC1YDR177W YEF3P16521 1044 aaKnown RBP5.79□□□□□ -1.48
UBC1YDR177W TRX2P22803 104 aaKnown RBP5.79□□□□□ -1.48
UBC1YDR177W TRZ1P36159 838 aaPredicted RBP5.79□□□□□ -1.48
UBC1YDR177W UBP15P50101 1230 aa5.79□□□□□ -1.48
UBC1YDR177W RKM2Q03942 479 aa5.79□□□□□ -1.48
UBC1YDR177W MDM12Q92328 271 aa5.79□□□□□ -1.48
UBC1YDR177W AAR2P32357 355 aaPredicted RBP5.78□□□□□ -1.48
UBC1YDR177W SLA1P32790 1244 aa5.78□□□□□ -1.48
UBC1YDR177W ARL1P38116 183 aaKnown RBP5.78□□□□□ -1.48
UBC1YDR177W FUI1P38196 639 aa5.78□□□□□ -1.48
UBC1YDR177W BOI2P39969 1040 aa5.78□□□□□ -1.48
UBC1YDR177W FET4P40988 552 aa5.78□□□□□ -1.48
UBC1YDR177W HEH2Q03281 663 aa5.78□□□□□ -1.48
UBC1YDR177W YOR378WQ08902 515 aa5.78□□□□□ -1.48
UBC1YDR177W GLO4Q12320 285 aa5.78□□□□□ -1.48
UBC1YDR177W HBN1Q96VH4 193 aa5.78□□□□□ -1.48
UBC1YDR177W SDH2P21801 266 aa5.77□□□□□ -1.49
UBC1YDR177W YEL1P34225 687 aa5.77□□□□□ -1.49
UBC1YDR177W EXO5P38289 585 aa5.77□□□□□ -1.49
UBC1YDR177W PEX14P53112 341 aa5.77□□□□□ -1.49
UBC1YDR177W LSC2P53312 427 aa5.77□□□□□ -1.49
UBC1YDR177W URN1Q06525 465 aaKnown RBP5.77□□□□□ -1.49
UBC1YDR177W DPS1P04802 557 aaKnown RBP5.76□□□□□ -1.49
UBC1YDR177W AFT1P22149 690 aa5.76□□□□□ -1.49
UBC1YDR177W RAD53P22216 821 aa5.76□□□□□ -1.49
UBC1YDR177W PUF4P25339 888 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
UBC1YDR177W PPH3P32345 308 aa5.76□□□□□ -1.49
UBC1YDR177W PTH2P34222 208 aa5.76□□□□□ -1.49
UBC1YDR177W BAP2P38084 609 aa5.76□□□□□ -1.49
UBC1YDR177W RGD1P38339 666 aa5.76□□□□□ -1.49
UBC1YDR177W MBP1P39678 833 aa5.76□□□□□ -1.49
UBC1YDR177W ERP2P39704 215 aa5.76□□□□□ -1.49
UBC1YDR177W PEA2P40091 420 aa5.76□□□□□ -1.49
UBC1YDR177W UBP6P43593 499 aaKnown RBP5.76□□□□□ -1.49
UBC1YDR177W MTC5Q03897 1148 aa5.76□□□□□ -1.49
UBC1YDR177W SND1Q04007 877 aa5.76□□□□□ -1.49
UBC1YDR177W AOS1Q06624 347 aa5.76□□□□□ -1.49
UBC1YDR177W YDR306CQ06640 478 aa5.76□□□□□ -1.49
UBC1YDR177W LAP2Q10740 671 aa5.76□□□□□ -1.49
UBC1YDR177W MET32Q12041 191 aa5.76□□□□□ -1.49
UBC1YDR177W TY1A-DR3Q12441 440 aa5.76□□□□□ -1.49
UBC1YDR177W HTS1P07263 546 aaKnown RBP5.75□□□□□ -1.49
UBC1YDR177W HEM13P11353 328 aaKnown RBP5.75□□□□□ -1.49
UBC1YDR177W HIR1P32479 840 aa5.75□□□□□ -1.49
UBC1YDR177W MFT1P33441 392 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms