RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W GIS4Q04233 774 aa10.74□□□□□ -0.69
SED1YDR077W LAP2Q10740 671 aa10.74□□□□□ -0.69
SED1YDR077W RPL22AP05749 121 aaKnown RBP10.73□□□□□ -0.69
SED1YDR077W STI1P15705 589 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69not detected
SED1YDR077W SPB4P25808 606 aaPredicted RBP10.73□□□□□ -0.69
SED1YDR077W MRPL10P36520 322 aa10.73□□□□□ -0.69
SED1YDR077W RRM3P38766 723 aa10.73□□□□□ -0.69
SED1YDR077W CCT3P39077 534 aaKnown RBP10.73□□□□□ -0.69
SED1YDR077W TPM2P40414 161 aa10.73□□□□□ -0.69
SED1YDR077W CUE3P53137 624 aaKnown RBP10.73□□□□□ -0.69
SED1YDR077W LSB1P53281 241 aa10.73□□□□□ -0.69
SED1YDR077W YOR296WQ08748 1289 aa10.73□□□□□ -0.69
SED1YDR077W GAL2P13181 574 aa10.72□□□□□ -0.69
SED1YDR077W ALG1P16661 449 aa10.72□□□□□ -0.69
SED1YDR077W MCM3P24279 971 aaKnown RBP10.72□□□□□ -0.69
SED1YDR077W MIC60P36112 540 aa10.72□□□□□ -0.69
SED1YDR077W TPS3P38426 1054 aaKnown RBP10.72□□□□□ -0.69
SED1YDR077W KEL1P38853 1164 aaKnown RBP10.72□□□□□ -0.69
SED1YDR077W UBP9P39967 754 aa10.72□□□□□ -0.69
SED1YDR077W VMS1Q04311 632 aaKnown RBP10.72□□□□□ -0.69
SED1YDR077W VIP1Q06685 1146 aaKnown RBP10.72□□□□□ -0.69
SED1YDR077W THR4P16120 514 aaKnown RBP10.71□□□□□ -0.69
SED1YDR077W SAM2P19358 384 aaKnown RBP10.71□□□□□ -0.69
SED1YDR077W MCM4P30665 933 aaKnown RBP10.71□□□□□ -0.69
SED1YDR077W BNI5P53890 448 aaKnown RBP10.71□□□□□ -0.69
SED1YDR077W EIS1Q05050 843 aaKnown RBP10.71□□□□□ -0.69
SED1YDR077W TFC8Q12308 588 aa10.71□□□□□ -0.69
SED1YDR077W PTC5Q12511 572 aa10.71□□□□□ -0.69
SED1YDR077W ATE1P16639 503 aa10.7□□□□□ -0.7
SED1YDR077W RPL8AP17076 256 aaKnown RBP10.7□□□□□ -0.7
SED1YDR077W BMH1P29311 267 aaKnown RBP10.7□□□□□ -0.7
SED1YDR077W TIF4631P39935 952 aaKnown RBP10.7□□□□□ -0.7
SED1YDR077W SMD2Q06217 110 aaKnown RBP10.7□□□□□ -0.7
SED1YDR077W MMR1Q06324 491 aa10.7□□□□□ -0.7
SED1YDR077W HIS4P00815 799 aaKnown RBP10.69□□□□□ -0.7
SED1YDR077W RET3P53600 189 aa10.69□□□□□ -0.7
SED1YDR077W CSR2Q12734 1121 aa10.69□□□□□ -0.7
SED1YDR077W ERG12P07277 443 aa10.68□□□□□ -0.7
SED1YDR077W HOP09932 586 aa10.68□□□□□ -0.7
SED1YDR077W STT3P39007 718 aaKnown RBP10.68□□□□□ -0.7
SED1YDR077W DSE4P53753 1117 aa10.68□□□□□ -0.7
SED1YDR077W TRS120Q04183 1289 aa10.68□□□□□ -0.7
SED1YDR077W CSM3Q04659 317 aa10.68□□□□□ -0.7
SED1YDR077W PWP2P25635 923 aaKnown RBP10.67□□□□□ -0.7
SED1YDR077W SAC6P32599 642 aaKnown RBP10.67□□□□□ -0.7
SED1YDR077W ACA1P39970 489 aa10.67□□□□□ -0.7
SED1YDR077W ASE1P50275 885 aa10.67□□□□□ -0.7
SED1YDR077W SOL4P53315 255 aa10.67□□□□□ -0.7
SED1YDR077W GSY2P27472 705 aa10.66□□□□□ -0.7
SED1YDR077W NOC2P39744 710 aaKnown RBP10.66□□□□□ -0.7
SED1YDR077W YGR153WP48238 217 aa10.66□□□□□ -0.7
SED1YDR077W SSL2Q00578 843 aa10.66□□□□□ -0.7
SED1YDR077W UTP4Q06679 776 aaKnown RBP10.66□□□□□ -0.7
SED1YDR077W SUB2Q07478 446 aaKnown RBP10.66□□□□□ -0.7
SED1YDR077W SLK19Q08581 821 aaKnown RBP10.66□□□□□ -0.7
SED1YDR077W SES1P07284 462 aaKnown RBP10.65□□□□□ -0.7
SED1YDR077W SRO9P25567 434 aaKnown RBP10.65□□□□□ -0.7
SED1YDR077W SRP40P32583 406 aaPredicted RBP10.65□□□□□ -0.7
SED1YDR077W PEA2P40091 420 aa10.65□□□□□ -0.7
SED1YDR077W LYS14P40971 790 aa10.65□□□□□ -0.7
SED1YDR077W DAK2P43550 591 aa10.65□□□□□ -0.7
SED1YDR077W SDA1P53313 767 aaKnown RBP10.65□□□□□ -0.7
SED1YDR077W SUE1Q06524 206 aa10.65□□□□□ -0.7
SED1YDR077W TUF1P02992 437 aaKnown RBP10.64□□□□□ -0.71
SED1YDR077W CDC15P27636 974 aa10.64□□□□□ -0.71
SED1YDR077W EBP2P36049 427 aaKnown RBP10.64□□□□□ -0.71
SED1YDR077W FYV10P40492 516 aa10.64□□□□□ -0.71
SED1YDR077W CIT3P43635 486 aa10.64□□□□□ -0.71
SED1YDR077W GIN4Q12263 1142 aa10.64□□□□□ -0.71
SED1YDR077W KRS1P15180 591 aaKnown RBP10.63□□□□□ -0.71
SED1YDR077W GSY1P23337 708 aa10.63□□□□□ -0.71
SED1YDR077W MCM2P29469 868 aa10.63□□□□□ -0.71
SED1YDR077W MPE1P35728 441 aaKnown RBP10.63□□□□□ -0.71
SED1YDR077W TFG2P41896 400 aaPredicted RBP10.63□□□□□ -0.71
SED1YDR077W CWC15Q03772 175 aaKnown RBP10.63□□□□□ -0.71
SED1YDR077W HCR1Q05775 265 aaKnown RBP10.63□□□□□ -0.71
SED1YDR077W PSR2Q07949 397 aa10.63□□□□□ -0.71
SED1YDR077W HIR1P32479 840 aa10.62□□□□□ -0.71
SED1YDR077W FMS1P50264 508 aa10.62□□□□□ -0.71
SED1YDR077W UBA2P52488 636 aa10.62□□□□□ -0.71
SED1YDR077W MFM1Q02783 413 aa10.62□□□□□ -0.71
SED1YDR077W YML037CQ03703 340 aa10.62□□□□□ -0.71
SED1YDR077W AIM33Q04516 312 aa10.62□□□□□ -0.71
SED1YDR077W GFD1Q04839 188 aaKnown RBP10.62□□□□□ -0.71
SED1YDR077W PUS5Q06244 254 aa10.62□□□□□ -0.71
SED1YDR077W YLH47Q06493 454 aa10.62□□□□□ -0.71
SED1YDR077W OCT1P35999 772 aa10.61□□□□□ -0.71
SED1YDR077W PHO88P38264 188 aaPredicted RBP10.61□□□□□ -0.71
SED1YDR077W SUL1P38359 859 aa10.61□□□□□ -0.71
SED1YDR077W PAN5P38787 379 aa10.61□□□□□ -0.71
SED1YDR077W VHR2P40041 505 aa10.61□□□□□ -0.71
SED1YDR077W ATG32P40458 529 aa10.61□□□□□ -0.71
SED1YDR077W OYE2Q03558 400 aaKnown RBP10.61□□□□□ -0.71
SED1YDR077W FKS1P38631 1876 aaKnown RBP10.61□□□□□ -0.71
SED1YDR077W ADE17P38009 592 aaKnown RBP10.6□□□□□ -0.71
SED1YDR077W GAA1P39012 614 aa10.6□□□□□ -0.71
SED1YDR077W VTC2P43585 828 aa10.6□□□□□ -0.71
SED1YDR077W YGR273CP53329 174 aa10.6□□□□□ -0.71
SED1YDR077W WAR1Q03631 944 aa10.6□□□□□ -0.71
SED1YDR077W BUL2Q03758 920 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms