RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	CMR1	Q12510	522 aa	Known RBP	4.16	□□□□□ -1.74
HBT1	YDL223C	RAS1	P01119	309 aa		4.15	□□□□□ -1.74
HBT1	YDL223C	LEU1	P07264	779 aa	Known RBP	4.15	□□□□□ -1.74
HBT1	YDL223C	PHO8	P11491	566 aa		4.15	□□□□□ -1.74
HBT1	YDL223C	RIM11	P38615	370 aa		4.15	□□□□□ -1.74
HBT1	YDL223C	RTA1	P53047	317 aa		4.15	□□□□□ -1.74
HBT1	YDL223C	POB3	Q04636	552 aa	Known RBP	4.15	□□□□□ -1.74
HBT1	YDL223C	UBP12	P39538	1254 aa		4.15	□□□□□ -1.75
HBT1	YDL223C	YGL140C	P53120	1219 aa		4.15	□□□□□ -1.75
HBT1	YDL223C	YLR225C	Q05948	407 aa	Known RBP	4.15	□□□□□ -1.75
HBT1	YDL223C	RTS3	P53289	263 aa		4.15	□□□□□ -1.75
HBT1	YDL223C	MAK10	Q02197	733 aa		4.15	□□□□□ -1.75
HBT1	YDL223C	IML1	P47170	1584 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	TRP2	P00899	507 aa	Known RBP	4.14	□□□□□ -1.75
HBT1	YDL223C	RPP2B	P02400	110 aa	Known RBP	4.14	□□□□□ -1.75
HBT1	YDL223C	CAN1	P04817	590 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	RPL8B	P29453	256 aa	Known RBP	4.14	□□□□□ -1.75
HBT1	YDL223C	RER2	P35196	286 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	PEX28	P38848	579 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	HAP1	P0CE41	1502 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	MOT2	P34909	587 aa	Known RBP	4.14	□□□□□ -1.75
HBT1	YDL223C	SKP1	P52286	194 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	FMP25	Q08023	583 aa		4.14	□□□□□ -1.75
HBT1	YDL223C	NUP188	P52593	1655 aa	Known RBP	4.14	□□□□□ -1.75
HBT1	YDL223C	VBA5	P36172	582 aa		4.13	□□□□□ -1.75
HBT1	YDL223C	YGR125W	P53273	1036 aa		4.13	□□□□□ -1.75
HBT1	YDL223C	MRP10	O75012	95 aa		4.13	□□□□□ -1.75
HBT1	YDL223C	BET3	P36149	193 aa		4.13	□□□□□ -1.75
HBT1	YDL223C	YEN1	P40028	759 aa		4.13	□□□□□ -1.75
HBT1	YDL223C	ZDS1	P50111	915 aa	Known RBP	4.13	□□□□□ -1.75
HBT1	YDL223C	KRE33	P53914	1056 aa	Known RBP	4.13	□□□□□ -1.75
HBT1	YDL223C	YPL066W	Q12194	479 aa		4.13	□□□□□ -1.75
HBT1	YDL223C	SSB1	P11484	613 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	SEC23	P15303	768 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	NPR1	P22211	790 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	RVS167	P39743	482 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	SSB2	P40150	613 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	PEX13	P80667	386 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	KAR2	P16474	682 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	THI4	P32318	326 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	TFA2	P36145	328 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	RDH54	P38086	958 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	RGA1	P39083	1007 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	NUG1	P40010	520 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	MAL11	P53048	616 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	ROD1	Q02805	837 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	YGR161W-C	Q3E744	92 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	SRB8	P25648	1427 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	AMS1	P22855	1083 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	MSH3	P25336	1018 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	DAL1	P32375	460 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	RSM26	P47141	266 aa		4.12	□□□□□ -1.75
HBT1	YDL223C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.12	□□□□□ -1.75
HBT1	YDL223C	TOP1	P04786	769 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	RGP1	P16664	663 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	PRP5	P21372	849 aa	Predicted RBP	4.11	□□□□□ -1.75
HBT1	YDL223C	ASH1	P34233	588 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	YTA6	P40328	754 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	YJL171C	P46992	396 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	URN1	Q06525	465 aa	Known RBP	4.11	□□□□□ -1.75
HBT1	YDL223C	VMR1	P38735	1592 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	UGA3	P26370	528 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	NTG2	Q08214	380 aa		4.11	□□□□□ -1.75
HBT1	YDL223C	CIT1	P00890	479 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-DR6	P0CX70	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-ER1	P0CX71	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-LR2	P0CX72	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-PL	P0CX73	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-JR1	P0CX74	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-LR3	P0CX75	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-ML2	P0CX76	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	PTK2	P47116	818 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	MSB3	P48566	633 aa	Predicted RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	NOG1	Q02892	647 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	TAF8	Q03750	510 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-GR1	Q12085	440 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	GLO4	Q12320	285 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	TY1A-OL	Q92392	440 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	IDI1	P15496	288 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	AGP1	P25376	633 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	SWE1	P32944	819 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	AHP1	P38013	176 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	YJR098C	P47139	656 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	PPT1	P53043	513 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	YOL057W	Q08225	711 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	YLR125W	Q12138	136 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	HVG1	P0CE11	249 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	RPL8A	P17076	256 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	SRM1	P21827	482 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	AMN1	P38285	549 aa	Predicted RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	EXO5	P38289	585 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	APM2	P38700	605 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	MBP1	P39678	833 aa		4.1	□□□□□ -1.75
HBT1	YDL223C	CHZ1	P40019	153 aa	Predicted RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	YNR029C	P53729	429 aa	Known RBP	4.1	□□□□□ -1.75
HBT1	YDL223C	NOP14	Q99207	810 aa	Known RBP	4.09	□□□□□ -1.75
HBT1	YDL223C	ADR1	P07248	1323 aa		4.09	□□□□□ -1.75
HBT1	YDL223C	ARG82	P07250	355 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms