RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W SPT20P50875 604 aa3.52□□□□□ -1.85
MCD1YDL003W ATG1P53104 897 aa3.52□□□□□ -1.85
MCD1YDL003W YNR063WP53749 607 aa3.52□□□□□ -1.85
MCD1YDL003W NBA1Q08229 501 aaKnown RBP3.52□□□□□ -1.85
MCD1YDL003W TAD3Q9URQ3 322 aa3.52□□□□□ -1.85
MCD1YDL003W SPS1P08458 490 aa3.51□□□□□ -1.85
MCD1YDL003W PRE10P21242 288 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
MCD1YDL003W RSA3Q05942 220 aaKnown RBP3.51□□□□□ -1.85
MCD1YDL003W SRO9P25567 434 aaKnown RBP3.5□□□□□ -1.85
MCD1YDL003W CTS1P29029 562 aa3.5□□□□□ -1.85
MCD1YDL003W NEM1P38757 446 aa3.5□□□□□ -1.85
MCD1YDL003W ENV11P53246 860 aa3.5□□□□□ -1.85
MCD1YDL003W SUB2Q07478 446 aaKnown RBP3.5□□□□□ -1.85
MCD1YDL003W NOC3Q07896 663 aaPredicted RBP3.5□□□□□ -1.85
MCD1YDL003W TAT2P38967 592 aa3.5□□□□□ -1.85
MCD1YDL003W PEX13P80667 386 aa3.5□□□□□ -1.85
MCD1YDL003W SGD1Q06132 899 aa3.5□□□□□ -1.85
MCD1YDL003W MNL2Q12205 849 aa3.5□□□□□ -1.85
MCD1YDL003W XKS1P42826 600 aa3.49□□□□□ -1.85
MCD1YDL003W SAM37P50110 327 aa3.49□□□□□ -1.85
MCD1YDL003W UTP5Q04177 643 aaKnown RBP3.48□□□□□ -1.85
MCD1YDL003W YCS4Q06156 1176 aa3.48□□□□□ -1.85
MCD1YDL003W RSC58Q07979 502 aa3.48□□□□□ -1.85
MCD1YDL003W MSH3P25336 1018 aa3.47□□□□□ -1.85
MCD1YDL003W LAM1P38851 1228 aa3.47□□□□□ -1.85
MCD1YDL003W YJL045WP47052 634 aa3.47□□□□□ -1.85
MCD1YDL003W HNT2P49775 206 aa3.47□□□□□ -1.85
MCD1YDL003W NOG1Q02892 647 aaKnown RBP3.47□□□□□ -1.85
MCD1YDL003W RSB1Q08417 382 aa3.47□□□□□ -1.85
MCD1YDL003W QNS1P38795 714 aaKnown RBP3.47□□□□□ -1.85
MCD1YDL003W MEF2P39677 819 aa3.47□□□□□ -1.85
MCD1YDL003W COQ4O13525 335 aa3.46□□□□□ -1.86
MCD1YDL003W PUF4P25339 888 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
MCD1YDL003W YSC84P32793 468 aa3.46□□□□□ -1.86
MCD1YDL003W TRM2P33753 639 aa3.46□□□□□ -1.86
MCD1YDL003W CIC1P38779 376 aaKnown RBP3.46□□□□□ -1.86
MCD1YDL003W VPS53P47061 822 aa3.46□□□□□ -1.86
MCD1YDL003W RSM26P47141 266 aa3.46□□□□□ -1.86
MCD1YDL003W GCN5Q03330 439 aa3.46□□□□□ -1.86
MCD1YDL003W VMA4P22203 233 aaKnown RBP3.45□□□□□ -1.86
MCD1YDL003W SQT1P35184 431 aa3.45□□□□□ -1.86
MCD1YDL003W GRS1P38088 690 aaKnown RBP3.45□□□□□ -1.86
MCD1YDL003W CCZ1P38273 704 aa3.45□□□□□ -1.86
MCD1YDL003W ROT1Q03691 256 aa3.45□□□□□ -1.86
MCD1YDL003W CYC1P00044 109 aaPredicted RBP3.44□□□□□ -1.86
MCD1YDL003W SEC26P41810 973 aaKnown RBP3.44□□□□□ -1.86
MCD1YDL003W YDR132CQ03900 495 aa3.44□□□□□ -1.86
MCD1YDL003W PUS9Q12069 462 aa3.44□□□□□ -1.86
MCD1YDL003W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
MCD1YDL003W KAR2P16474 682 aaKnown RBP3.43□□□□□ -1.86
MCD1YDL003W ADD66P36040 267 aa3.42□□□□□ -1.86
MCD1YDL003W MSE1P48525 536 aa3.42□□□□□ -1.86
MCD1YDL003W URN1Q06525 465 aaKnown RBP3.42□□□□□ -1.86
MCD1YDL003W TRL1P09880 827 aaKnown RBP3.41□□□□□ -1.86
MCD1YDL003W HCM1P25364 564 aa3.41□□□□□ -1.86
MCD1YDL003W YPT53P36019 220 aa3.41□□□□□ -1.86
MCD1YDL003W TNA1P53322 534 aa3.41□□□□□ -1.86
MCD1YDL003W HOS3Q02959 697 aaKnown RBP3.41□□□□□ -1.86
MCD1YDL003W RKM2Q03942 479 aa3.41□□□□□ -1.86
MCD1YDL003W RSM24Q03976 319 aa3.41□□□□□ -1.86
MCD1YDL003W KIP1P28742 1111 aa3.41□□□□□ -1.86
MCD1YDL003W PEX28P38848 579 aa3.41□□□□□ -1.86
MCD1YDL003W RXT3Q07458 294 aa3.41□□□□□ -1.86
MCD1YDL003W GPI13Q07830 1017 aa3.41□□□□□ -1.86
MCD1YDL003W PRP40P33203 583 aaKnown RBP3.4□□□□□ -1.87
MCD1YDL003W MCM6P53091 1017 aaKnown RBP3.4□□□□□ -1.87
MCD1YDL003W RCL1Q08096 367 aaPredicted RBP3.4□□□□□ -1.87
MCD1YDL003W GPB2P39717 880 aa3.39□□□□□ -1.87
MCD1YDL003W MDJ2P42834 146 aa3.39□□□□□ -1.87
MCD1YDL003W MNN10P50108 393 aaKnown RBP3.39□□□□□ -1.87
MCD1YDL003W PBP1P53297 722 aaKnown RBP3.39□□□□□ -1.87
MCD1YDL003W PLB2Q03674 706 aa3.39□□□□□ -1.87
MCD1YDL003W DAL4Q04895 635 aa3.39□□□□□ -1.87
MCD1YDL003W NUT2Q06213 157 aa3.39□□□□□ -1.87
MCD1YDL003W FRT1Q99332 602 aa3.39□□□□□ -1.87
MCD1YDL003W CMP2P14747 604 aa3.39□□□□□ -1.87
MCD1YDL003W DOM34P33309 386 aa3.39□□□□□ -1.87
MCD1YDL003W ERP5P38819 212 aa3.39□□□□□ -1.87
MCD1YDL003W ULP1Q02724 621 aa3.39□□□□□ -1.87
MCD1YDL003W EST2Q06163 884 aa3.39□□□□□ -1.87
MCD1YDL003W PTC5Q12511 572 aa3.39□□□□□ -1.87
MCD1YDL003W RFC5P38251 354 aa3.38□□□□□ -1.87
MCD1YDL003W PIK1P39104 1066 aa3.38□□□□□ -1.87
MCD1YDL003W SUN4P53616 420 aa3.38□□□□□ -1.87
MCD1YDL003W ACK1Q07622 623 aaPredicted RBP3.38□□□□□ -1.87
MCD1YDL003W SPO21Q12411 609 aa3.38□□□□□ -1.87
MCD1YDL003W RLF2Q12495 606 aa3.38□□□□□ -1.87
MCD1YDL003W YBL113CQ7M4S9 792 aa3.38□□□□□ -1.87
MCD1YDL003W GAL10P04397 699 aa3.37□□□□□ -1.87
MCD1YDL003W GCD6P32501 712 aaKnown RBP3.37□□□□□ -1.87
MCD1YDL003W UGA4P32837 571 aa3.37□□□□□ -1.87
MCD1YDL003W DUS4Q06063 367 aa3.37□□□□□ -1.87
MCD1YDL003W TMA10Q06177 86 aa3.37□□□□□ -1.87
MCD1YDL003W GPB1Q08886 897 aa3.37□□□□□ -1.87
MCD1YDL003W OXR1Q08952 273 aa3.37□□□□□ -1.87
MCD1YDL003W CDC20P26309 610 aa3.36□□□□□ -1.87
MCD1YDL003W CDC3P32457 520 aaKnown RBP3.36□□□□□ -1.87
MCD1YDL003W VPS35P34110 944 aa3.36□□□□□ -1.87
MCD1YDL003W AIM21P40563 679 aa3.36□□□□□ -1.87
MCD1YDL003W CTF4Q01454 927 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 141.3 ms