RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeast

Gene VMA9, Length 222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA9	YCL005W-A	SVF1	Q05515	481 aa		3.05	□□□□□ -1.92
VMA9	YCL005W-A	RTT10	Q08924	1013 aa		3.05	□□□□□ -1.92
VMA9	YCL005W-A	YPR053C	Q6Q5F3	151 aa		3.05	□□□□□ -1.92
VMA9	YCL005W-A	TRP2	P00899	507 aa	Known RBP	3.04	□□□□□ -1.92
VMA9	YCL005W-A	MKK2	P32491	506 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	ABD1	P32783	436 aa	Predicted RBP	3.04	□□□□□ -1.92
VMA9	YCL005W-A	MNR2	P35724	969 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	ADD66	P36040	267 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	YAR028W	P39548	234 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	MSH4	P40965	878 aa	Predicted RBP	3.04	□□□□□ -1.92
VMA9	YCL005W-A	FAR11	P53917	953 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	SIW14	P53965	281 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	AOS1	Q06624	347 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	YOR223W	Q12015	292 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	PHM7	Q12252	991 aa		3.04	□□□□□ -1.92
VMA9	YCL005W-A	BAS1	P22035	811 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	VMA4	P22203	233 aa	Known RBP	3.03	□□□□□ -1.92
VMA9	YCL005W-A	PUF4	P25339	888 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
VMA9	YCL005W-A	SFA1	P32771	386 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	TAT1	P38085	619 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	ALG3	P38179	458 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	SKN7	P38889	622 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	GPB2	P39717	880 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	ICP55	P40051	511 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	YFL054C	P43549	646 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	YLR225C	Q05948	407 aa	Known RBP	3.03	□□□□□ -1.92
VMA9	YCL005W-A	AVO1	Q08236	1176 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	YPL066W	Q12194	479 aa		3.03	□□□□□ -1.92
VMA9	YCL005W-A	CLN2	P20438	545 aa		3.02	□□□□□ -1.93
VMA9	YCL005W-A	NFS1	P25374	497 aa		3.02	□□□□□ -1.93
VMA9	YCL005W-A	RSC6	P25632	483 aa		3.02	□□□□□ -1.93
VMA9	YCL005W-A	WHI3	P34761	661 aa	Known RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	SEA4	P38164	1038 aa		3.02	□□□□□ -1.93
VMA9	YCL005W-A	ARI1	P53111	347 aa	Known RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	YGR053C	P53234	283 aa		3.02	□□□□□ -1.93
VMA9	YCL005W-A	TIF35	Q04067	274 aa	Known RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	RSA3	Q05942	220 aa	Known RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	YLR257W	Q06146	321 aa	Known RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	OPI10	Q08202	246 aa		3.02	□□□□□ -1.93
VMA9	YCL005W-A	FAL1	Q12099	399 aa	Known RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	SSF2	Q12153	453 aa	Predicted RBP	3.02	□□□□□ -1.93
VMA9	YCL005W-A	INO1	P11986	533 aa		3.01	□□□□□ -1.93
VMA9	YCL005W-A	SYP1	P25623	870 aa	Known RBP	3.01	□□□□□ -1.93
VMA9	YCL005W-A	RAD27	P26793	382 aa		3.01	□□□□□ -1.93
VMA9	YCL005W-A	MLS1	P30952	554 aa		3.01	□□□□□ -1.93
VMA9	YCL005W-A	LYP1	P32487	611 aa		3.01	□□□□□ -1.93
VMA9	YCL005W-A	ARL1	P38116	183 aa	Known RBP	3.01	□□□□□ -1.93
VMA9	YCL005W-A	YPL034W	Q03083	165 aa		3.01	□□□□□ -1.93
VMA9	YCL005W-A	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
VMA9	YCL005W-A	PTC5	Q12511	572 aa		3.01	□□□□□ -1.93
VMA9	YCL005W-A	RPS4A	P0CX35	261 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	RPS4B	P0CX36	261 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	TAF13	P11747	167 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	DBP5	P20449	482 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	RET1	P22276	1149 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	KIP1	P28742	1111 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	SMY2	P32909	740 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	PGM1	P33401	570 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	MCM7	P38132	845 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	QNS1	P38795	714 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	TAT2	P38967	592 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	MPH1	P40562	993 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	YJL045W	P47052	634 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	CCT8	P47079	568 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	TYW3	P53177	273 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	TPP1	Q03796	238 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	GIC2	Q06648	383 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	PUS1	Q12211	544 aa	Known RBP	3	□□□□□ -1.93
VMA9	YCL005W-A	YLR122C	Q12312	125 aa		3	□□□□□ -1.93
VMA9	YCL005W-A	YER152C	P10356	443 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	STE5	P32917	917 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	MBP1	P39678	833 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	SPF1	P39986	1215 aa	Known RBP	2.99	□□□□□ -1.93
VMA9	YCL005W-A	IOC3	P43596	787 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	CNN1	P43618	361 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	ALT1	P52893	592 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	RKM2	Q03942	479 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	RCL1	Q08096	367 aa	Predicted RBP	2.99	□□□□□ -1.93
VMA9	YCL005W-A	PUS7	Q08647	676 aa	Known RBP	2.99	□□□□□ -1.93
VMA9	YCL005W-A	TMA46	Q12000	345 aa	Known RBP	2.99	□□□□□ -1.93
VMA9	YCL005W-A	YLL054C	Q12244	843 aa		2.99	□□□□□ -1.93
VMA9	YCL005W-A	TRP3	P00937	484 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	GCD1	P09032	578 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA9	YCL005W-A	GRX1	P25373	110 aa	Known RBP	2.98	□□□□□ -1.93
VMA9	YCL005W-A	ATG14	P38270	344 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	SAF1	P38352	637 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	OCA5	P38738	679 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	YGL176C	P46945	554 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	YGR130C	P53278	816 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	ORC1	P54784	914 aa	Predicted RBP	2.98	□□□□□ -1.93
VMA9	YCL005W-A	TDA5	Q06417	326 aa	Known RBP	2.98	□□□□□ -1.93
VMA9	YCL005W-A	SPO21	Q12411	609 aa		2.98	□□□□□ -1.93
VMA9	YCL005W-A	RAD4	P14736	754 aa		2.97	□□□□□ -1.93
VMA9	YCL005W-A	DBP2	P24783	546 aa	Known RBP	2.97	□□□□□ -1.93
VMA9	YCL005W-A	COQ2	P32378	372 aa		2.97	□□□□□ -1.93
VMA9	YCL005W-A	NNK1	P36003	928 aa		2.97	□□□□□ -1.93
VMA9	YCL005W-A	YKR073C	P36153	106 aa		2.97	□□□□□ -1.93
VMA9	YCL005W-A	VBA5	P36172	582 aa		2.97	□□□□□ -1.93
VMA9	YCL005W-A	MXR1	P40029	184 aa		2.97	□□□□□ -1.93
VMA9	YCL005W-A	SIP5	P40210	489 aa	Known RBP	2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms