RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W CIK1Q01649 594 aa1.81□□□□□ -2.12
VPS15YBR097W ATG29Q12092 213 aa1.81□□□□□ -2.12
VPS15YBR097W PUS1Q12211 544 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W CET1O13297 549 aaPredicted RBP1.81□□□□□ -2.12
VPS15YBR097W DAL5P15365 543 aa1.81□□□□□ -2.12
VPS15YBR097W PET18P25362 215 aa1.81□□□□□ -2.12
VPS15YBR097W GLN1P32288 370 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W RNP1P32385 249 aa1.81□□□□□ -2.12
VPS15YBR097W LHS1P36016 881 aa1.81□□□□□ -2.12
VPS15YBR097W YKR018CP36114 725 aa1.81□□□□□ -2.12
VPS15YBR097W SAP155P43612 1002 aa1.81□□□□□ -2.12
VPS15YBR097W VPS53P47061 822 aa1.81□□□□□ -2.12
VPS15YBR097W URB2P47108 1174 aa1.81□□□□□ -2.12
VPS15YBR097W SRL4Q03085 281 aa1.81□□□□□ -2.12
VPS15YBR097W CLU1Q03690 1277 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W GPI17Q04080 534 aa1.81□□□□□ -2.12
VPS15YBR097W GYL1Q04322 720 aa1.81□□□□□ -2.12
VPS15YBR097W KRE28Q04431 385 aa1.81□□□□□ -2.12
VPS15YBR097W TFB4Q12004 338 aa1.81□□□□□ -2.12
VPS15YBR097W CDC53Q12018 815 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W LSP1Q12230 341 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W TY1B-JR2P47100 1755 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W TY1B-ER2Q03619 1755 aa1.81□□□□□ -2.12
VPS15YBR097W TY1B-MR1Q04214 1755 aa1.81□□□□□ -2.12
VPS15YBR097W TY1B-MR2Q04670 1755 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W TY1B-LR1Q12088 1755 aaKnown RBP1.81□□□□□ -2.12
VPS15YBR097W TY1B-NL1Q12112 1755 aa1.81□□□□□ -2.12
VPS15YBR097W TY1B-GR1Q12141 1755 aa1.81□□□□□ -2.12
VPS15YBR097W TY1B-BLQ12490 1755 aa1.81□□□□□ -2.12
VPS15YBR097W MYO4P32492 1471 aa1.81□□□□□ -2.12
VPS15YBR097W MAS2P11914 482 aa1.8□□□□□ -2.12
VPS15YBR097W KGD2P19262 463 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W PRP9P19736 530 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W RPC34P32910 317 aa1.8□□□□□ -2.12
VPS15YBR097W ATG19P35193 415 aa1.8□□□□□ -2.12
VPS15YBR097W MRP8P35719 219 aa1.8□□□□□ -2.12
VPS15YBR097W SHU2P38957 223 aa1.8□□□□□ -2.12
VPS15YBR097W RSP5P39940 809 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W PRM2P40534 656 aa1.8□□□□□ -2.12
VPS15YBR097W ALA1P40825 983 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W TPO2P53283 614 aa1.8□□□□□ -2.12
VPS15YBR097W IST1P53843 298 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W RSC4Q02206 625 aa1.8□□□□□ -2.12
VPS15YBR097W NAN1Q02931 896 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W VPS30Q02948 557 aa1.8□□□□□ -2.12
VPS15YBR097W YAP6Q03935 383 aa1.8□□□□□ -2.12
VPS15YBR097W ITT1Q04638 464 aa1.8□□□□□ -2.12
VPS15YBR097W ATG13Q06628 738 aa1.8□□□□□ -2.12
VPS15YBR097W RAD34Q06665 692 aa1.8□□□□□ -2.12
VPS15YBR097W ATG20Q07528 640 aa1.8□□□□□ -2.12
VPS15YBR097W LAM6Q08001 693 aa1.8□□□□□ -2.12
VPS15YBR097W MCD1Q12158 566 aa1.8□□□□□ -2.12
VPS15YBR097W YAH1Q12184 172 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W SSB1P11484 613 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W SUP45P12385 437 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W NCP1P16603 691 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W MKS1P34072 584 aa1.8□□□□□ -2.12
VPS15YBR097W YKL063CP35725 167 aa1.8□□□□□ -2.12
VPS15YBR097W EAP1P36041 632 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W YHR078WP38799 552 aa1.8□□□□□ -2.12
VPS15YBR097W LIN1P38852 340 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W SSB2P40150 613 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W CAB2P40506 365 aa1.8□□□□□ -2.12
VPS15YBR097W CCM1P48237 864 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W NOP13P53883 403 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
VPS15YBR097W SEN54Q02825 467 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W PPN1Q04119 674 aa1.8□□□□□ -2.12
VPS15YBR097W PIN2Q12057 282 aa1.8□□□□□ -2.12
VPS15YBR097W APC11Q12157 165 aa1.8□□□□□ -2.12
VPS15YBR097W NBP2Q12163 236 aa1.8□□□□□ -2.12
VPS15YBR097W MAM3Q12296 706 aa1.8□□□□□ -2.12
VPS15YBR097W KCS1Q12494 1050 aa1.8□□□□□ -2.12
VPS15YBR097W PDR12Q02785 1511 aa1.8□□□□□ -2.12
VPS15YBR097W GCD1P09032 578 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W MCM2P29469 868 aa1.8□□□□□ -2.12
VPS15YBR097W VPH2P32341 215 aa1.8□□□□□ -2.12
VPS15YBR097W TFC3P34111 1160 aa1.8□□□□□ -2.12
VPS15YBR097W TEF4P36008 412 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W YRO2P38079 344 aa1.8□□□□□ -2.12
VPS15YBR097W LDH1P38139 375 aa1.8□□□□□ -2.12
VPS15YBR097W SIT1P39980 628 aa1.8□□□□□ -2.12
VPS15YBR097W MKT1P40850 830 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W LYS5P50113 272 aa1.8□□□□□ -2.12
VPS15YBR097W ASE1P50275 885 aa1.8□□□□□ -2.12
VPS15YBR097W CNM67P53865 581 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W BUL2Q03758 920 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W FIN1Q03898 291 aa1.8□□□□□ -2.12
VPS15YBR097W TYW1Q08960 810 aaKnown RBP1.8□□□□□ -2.12
VPS15YBR097W SRS2P12954 1174 aa1.8□□□□□ -2.12
VPS15YBR097W GAP1P19145 602 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W SNT1P25357 1226 aa1.8□□□□□ -2.12
VPS15YBR097W UGA3P26370 528 aa1.8□□□□□ -2.12
VPS15YBR097W PEP3P27801 918 aa1.8□□□□□ -2.12
VPS15YBR097W MRF1P30775 413 aaPredicted RBP1.8□□□□□ -2.12
VPS15YBR097W NDI1P32340 513 aa1.8□□□□□ -2.12
VPS15YBR097W MRE11P32829 692 aa1.8□□□□□ -2.12
VPS15YBR097W MDL2P33311 773 aa1.8□□□□□ -2.12
VPS15YBR097W SPC42P36094 363 aa1.8□□□□□ -2.12
VPS15YBR097W TAF5P38129 798 aa1.8□□□□□ -2.12
VPS15YBR097W SLN1P39928 1220 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms