RNA–Protein interactions for RNA: ENST00000581302.5

RIOK3-205, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 3,049 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-205ENST00000581302 KNSTRNQ9Y448 316 aa9.45□□□□□ -0.9
RIOK3-205ENST00000581302 EIF3AQ14152 1382 aaKnown RBP9.44□□□□□ -0.9
RIOK3-205ENST00000581302 GOLIM4O00461 696 aa9.44□□□□□ -0.9
RIOK3-205ENST00000581302 KDM4FA0A1W2PPD8 638 aa9.44□□□□□ -0.9
RIOK3-205ENST00000581302 CHGAP10645 457 aaKnown RBP9.44□□□□□ -0.9
RIOK3-205ENST00000581302 MAP2K1Q02750 393 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-205ENST00000581302 CT47A1Q5JQC4 288 aaPredicted RBP9.44□□□□□ -0.9
RIOK3-205ENST00000581302 RGPD1P0DJD0 1748 aa9.43□□□□□ -0.9
RIOK3-205ENST00000581302 XRCC6P12956 609 aaKnown RBP eCLIP9.43□□□□□ -0.9
RIOK3-205ENST00000581302 KCNJ4P48050 445 aa9.43□□□□□ -0.9
RIOK3-205ENST00000581302 DUSP27Q5VZP5 1158 aa9.43□□□□□ -0.9
RIOK3-205ENST00000581302 BORCS6Q96GS4 357 aa9.43□□□□□ -0.9
RIOK3-205ENST00000581302 CFAP65Q6ZU64 1925 aaKnown RBP9.42□□□□□ -0.9
RIOK3-205ENST00000581302 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-205ENST00000581302 SATB1Q01826 763 aa9.42□□□□□ -0.9
RIOK3-205ENST00000581302 NBPF9Q3BBW0 867 aa9.42□□□□□ -0.9
RIOK3-205ENST00000581302 POGKQ9P215 609 aa9.42□□□□□ -0.9
RIOK3-205ENST00000581302 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
RIOK3-205ENST00000581302 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
RIOK3-205ENST00000581302 NPHP4O75161 1426 aaPredicted RBP9.42□□□□□ -0.9
RIOK3-205ENST00000581302 PIK3C2AO00443 1686 aa9.42□□□□□ -0.9
RIOK3-205ENST00000581302 ADAMTS7Q9UKP4 1686 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 SLIT3O75094 1523 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 OTUD6BQ8N6M0 293 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 TRIM34Q9BYJ4 488 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
RIOK3-205ENST00000581302 APAF1O14727 1248 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 CAPN2P17655 700 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 SGSM3Q96HU1 749 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 SLC12A5Q9H2X9 1139 aa9.41□□□□□ -0.9
RIOK3-205ENST00000581302 KDM4AO75164 1064 aa9.4□□□□□ -0.9
RIOK3-205ENST00000581302 DNAJC14Q6Y2X3 702 aaPredicted RBP9.4□□□□□ -0.9
RIOK3-205ENST00000581302 PANK2Q9BZ23 570 aa9.4□□□□□ -0.9
RIOK3-205ENST00000581302 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
RIOK3-205ENST00000581302 BCAR3O75815 825 aa9.39□□□□□ -0.91
RIOK3-205ENST00000581302 YTHDC2Q9H6S0 1430 aaKnown RBP9.39□□□□□ -0.91
RIOK3-205ENST00000581302 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
RIOK3-205ENST00000581302 CEP83Q9Y592 693 aa9.39□□□□□ -0.91
RIOK3-205ENST00000581302 NWD2Q9ULI1 1742 aa9.39□□□□□ -0.91
RIOK3-205ENST00000581302 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-205ENST00000581302 ZNF513Q8N8E2 541 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-205ENST00000581302 PARP4Q9UKK3 1724 aaKnown RBP9.39□□□□□ -0.91
RIOK3-205ENST00000581302 ARID4AP29374 1257 aaPredicted RBP9.38□□□□□ -0.91
RIOK3-205ENST00000581302 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
RIOK3-205ENST00000581302 CCDC96Q2M329 555 aa9.38□□□□□ -0.91
RIOK3-205ENST00000581302 NBPF10Q6P3W6 841 aaKnown RBP9.38□□□□□ -0.91
RIOK3-205ENST00000581302 RAI14Q9P0K7 980 aa9.38□□□□□ -0.91
RIOK3-205ENST00000581302 TBX22Q9Y458 520 aa9.38□□□□□ -0.91
RIOK3-205ENST00000581302 SSH2Q76I76 1423 aa9.38□□□□□ -0.91
RIOK3-205ENST00000581302 OFD1O75665 1012 aa9.38□□□□□ -0.91
RIOK3-205ENST00000581302 SAFB2Q14151 953 aaKnown RBP eCLIP9.38□□□□□ -0.91
RIOK3-205ENST00000581302 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
RIOK3-205ENST00000581302 PDE4AP27815 886 aa9.37□□□□□ -0.91
RIOK3-205ENST00000581302 ZNF831Q5JPB2 1677 aa9.37□□□□□ -0.91
RIOK3-205ENST00000581302 ADGRL3Q9HAR2 1447 aa9.37□□□□□ -0.91
RIOK3-205ENST00000581302 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
RIOK3-205ENST00000581302 SLFN5Q08AF3 891 aa9.37□□□□□ -0.91
RIOK3-205ENST00000581302 PTPRUQ92729 1446 aa9.36□□□□□ -0.91
RIOK3-205ENST00000581302 COL18A1P39060 1754 aa9.36□□□□□ -0.91
RIOK3-205ENST00000581302 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
RIOK3-205ENST00000581302 TERF2IPQ9NYB0 399 aa9.36□□□□□ -0.91
RIOK3-205ENST00000581302 TNNQ9UQP3 1299 aa9.36□□□□□ -0.91
RIOK3-205ENST00000581302 FSD2A1L4K1 749 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 TULP2O00295 520 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
RIOK3-205ENST00000581302 CBX1P83916 185 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 ATF5Q9Y2D1 282 aaPredicted RBP9.35□□□□□ -0.91
RIOK3-205ENST00000581302 CD163L1Q9NR16 1453 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 NCAPD2Q15021 1401 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
RIOK3-205ENST00000581302 GOLGA2Q08379 1002 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 TRMT2AQ8IZ69 625 aaKnown RBP9.35□□□□□ -0.91
RIOK3-205ENST00000581302 BACH2Q9BYV9 841 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 EFCC1Q9HA90 598 aa9.35□□□□□ -0.91
RIOK3-205ENST00000581302 KDM2BQ8NHM5 1336 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
RIOK3-205ENST00000581302 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
RIOK3-205ENST00000581302 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
RIOK3-205ENST00000581302 NSD2O96028 1365 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 NBPF6Q5VWK0 638 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 NBPF5PQ86XG9 351 aaPredicted RBP9.34□□□□□ -0.91
RIOK3-205ENST00000581302 NBPF4Q96M43 638 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 MYCBPQ99417 103 aaPredicted RBP9.34□□□□□ -0.91
RIOK3-205ENST00000581302 CDK12Q9NYV4 1490 aaPredicted RBP9.34□□□□□ -0.91
RIOK3-205ENST00000581302 NRAPQ86VF7 1730 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 DYNC1I1O14576 645 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 RINLQ6ZS11 566 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 ARMCX6Q7L4S7 300 aa9.34□□□□□ -0.91
RIOK3-205ENST00000581302 POLR3AO14802 1390 aaPredicted RBP9.33□□□□□ -0.92
RIOK3-205ENST00000581302 SLC4A3P48751 1232 aa9.33□□□□□ -0.92
RIOK3-205ENST00000581302 CASC1Q6TDU7 716 aa9.33□□□□□ -0.92
RIOK3-205ENST00000581302 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
RIOK3-205ENST00000581302 NSD3Q9BZ95 1437 aa9.33□□□□□ -0.92
RIOK3-205ENST00000581302 UQCRHLA0A096LP55 91 aa9.33□□□□□ -0.92
RIOK3-205ENST00000581302 UQCRHP07919 91 aa9.33□□□□□ -0.92
RIOK3-205ENST00000581302 FBXO31Q5XUX0 539 aaPredicted RBP9.33□□□□□ -0.92
RIOK3-205ENST00000581302 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.33□□□□□ -0.92
RIOK3-205ENST00000581302 CT47B1P0C2W7 299 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms