RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 AGBL1Q96MI9 1066 aa7.7□□□□□ -1.18
CDR2-203ENST00000563573 POLMQ9NP87 494 aaPredicted RBP7.7□□□□□ -1.18
CDR2-203ENST00000563573 PCDHB9Q9Y5E1 797 aa7.7□□□□□ -1.18
CDR2-203ENST00000563573 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
CDR2-203ENST00000563573 LILRA1O75019 489 aa7.69□□□□□ -1.18
CDR2-203ENST00000563573 PTGIRP43119 386 aa7.69□□□□□ -1.18
CDR2-203ENST00000563573 NR1H3Q13133 447 aa7.69□□□□□ -1.18
CDR2-203ENST00000563573 INSM2Q96T92 566 aaPredicted RBP7.69□□□□□ -1.18
CDR2-203ENST00000563573 PRM3Q9NNZ6 103 aa7.69□□□□□ -1.18
CDR2-203ENST00000563573 NDUFB9Q9Y6M9 179 aa7.69□□□□□ -1.18
CDR2-203ENST00000563573 CFTRP13569 1480 aa7.68□□□□□ -1.18
CDR2-203ENST00000563573 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
CDR2-203ENST00000563573 NANOS1Q8WY41 292 aaKnown RBP7.68□□□□□ -1.18
CDR2-203ENST00000563573 SLC35F4A4IF30 521 aa7.67□□□□□ -1.18
CDR2-203ENST00000563573 CTSOP43234 321 aaPredicted RBP7.67□□□□□ -1.18
CDR2-203ENST00000563573 CCDC155Q8N6L0 562 aa7.67□□□□□ -1.18
CDR2-203ENST00000563573 ZNF395Q9H8N7 513 aaPredicted RBP7.67□□□□□ -1.18
CDR2-203ENST00000563573 GIGYF1O75420 1035 aaPredicted RBP7.66□□□□□ -1.18
CDR2-203ENST00000563573 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
CDR2-203ENST00000563573 RNF217Q8TC41 542 aa7.66□□□□□ -1.18
CDR2-203ENST00000563573 ESF1Q9H501 851 aaKnown RBP7.66□□□□□ -1.18
CDR2-203ENST00000563573 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
CDR2-203ENST00000563573 CYLDQ9NQC7 956 aa7.65□□□□□ -1.18
CDR2-203ENST00000563573 PDS5BQ9NTI5 1447 aa7.65□□□□□ -1.18
CDR2-203ENST00000563573 ATP5J2-PTCD1G3V325 749 aa7.64□□□□□ -1.19
CDR2-203ENST00000563573 GPC1P35052 558 aa7.64□□□□□ -1.19
CDR2-203ENST00000563573 RNF144AP50876 292 aaPredicted RBP7.64□□□□□ -1.19
CDR2-203ENST00000563573 CC2D2BQ6DHV5 1058 aa7.64□□□□□ -1.19
CDR2-203ENST00000563573 LYSMD3Q7Z3D4 306 aa7.64□□□□□ -1.19
CDR2-203ENST00000563573 MTMR14Q8NCE2 650 aa7.64□□□□□ -1.19
CDR2-203ENST00000563573 NESP48681 1621 aa7.63□□□□□ -1.19
CDR2-203ENST00000563573 ITGA6P23229 1130 aa7.63□□□□□ -1.19
CDR2-203ENST00000563573 SV2AQ7L0J3 742 aa7.63□□□□□ -1.19
CDR2-203ENST00000563573 KDF1Q8NAX2 398 aaPredicted RBP7.63□□□□□ -1.19
CDR2-203ENST00000563573 ERVK-9P63128 1117 aa7.62□□□□□ -1.19
CDR2-203ENST00000563573 CYP2U1Q7Z449 544 aa7.62□□□□□ -1.19
CDR2-203ENST00000563573 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
CDR2-203ENST00000563573 GMCL1Q96IK5 515 aa7.61□□□□□ -1.19
CDR2-203ENST00000563573 SNRKQ9NRH2 765 aa7.61□□□□□ -1.19
CDR2-203ENST00000563573 FANCD2Q9BXW9 1451 aa7.61□□□□□ -1.19
CDR2-203ENST00000563573 ABCC8Q09428 1581 aa7.6□□□□□ -1.19
CDR2-203ENST00000563573 NLRP3Q96P20 1036 aa7.6□□□□□ -1.19
CDR2-203ENST00000563573 COL25A1Q9BXS0 654 aaPredicted RBP7.6□□□□□ -1.19
CDR2-203ENST00000563573 A0A1W2PRU2 124 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 CDC14CA4D256 554 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.193e-7■■■■□ 24.5
CDR2-203ENST00000563573 VWA5B2Q8N398 1253 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 GPR161Q8N6U8 529 aaKnown RBP7.59□□□□□ -1.19
CDR2-203ENST00000563573 CNTNAP3BQ96NU0 1288 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 CNTNAP3Q9BZ76 1288 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 PCDHB11Q9Y5F2 797 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 CEP164Q9UPV0 1460 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 KIF21AQ7Z4S6 1674 aa7.59□□□□□ -1.19
CDR2-203ENST00000563573 WRNQ14191 1432 aaPredicted RBP eCLIP7.59□□□□□ -1.191e-6■■■■■ 58.5
CDR2-203ENST00000563573 MEN1O00255 615 aa7.58□□□□□ -1.2
CDR2-203ENST00000563573 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
CDR2-203ENST00000563573 ERCC6Q03468 1493 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 SENP3-EIF4A1A0A087X0R7 540 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 GPR37L1O60883 481 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 CLN3Q13286 438 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 WDR44Q5JSH3 913 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 SLC27A3Q5K4L6 730 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 FOXR1Q6PIV2 292 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 PRICKLE2Q7Z3G6 844 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 CEP126Q9P2H0 1117 aa7.57□□□□□ -1.2
CDR2-203ENST00000563573 H7C1W4 665 aa7.56□□□□□ -1.2
CDR2-203ENST00000563573 GNRH1P01148 92 aa7.56□□□□□ -1.2
CDR2-203ENST00000563573 KRT76Q01546 638 aa7.56□□□□□ -1.2
CDR2-203ENST00000563573 BIVM-ERCC5R4GMW8 1640 aa7.56□□□□□ -1.2
CDR2-203ENST00000563573 TRAK2O60296 914 aa7.55□□□□□ -1.2
CDR2-203ENST00000563573 DYRK1BQ9Y463 629 aa7.55□□□□□ -1.2
CDR2-203ENST00000563573 TOP2BQ02880 1626 aa7.55□□□□□ -1.2
CDR2-203ENST00000563573 SLURP2P0DP57 97 aa7.54□□□□□ -1.2
CDR2-203ENST00000563573 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
CDR2-203ENST00000563573 GRIP2Q9C0E4 1043 aa7.54□□□□□ -1.2
CDR2-203ENST00000563573 OSBPL3Q9H4L5 887 aa7.54□□□□□ -1.2
CDR2-203ENST00000563573 SYNJ1O43426 1573 aa7.54□□□□□ -1.2
CDR2-203ENST00000563573 SPATA31C2B4DYI2 1134 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 RNF225M0QZC1 329 aaPredicted RBP7.53□□□□□ -1.2
CDR2-203ENST00000563573 RHOQP17081 205 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 GTF2E1P29083 439 aaPredicted RBP7.53□□□□□ -1.2
CDR2-203ENST00000563573 SCTRP47872 440 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 USP4Q13107 963 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 SIRT1Q96EB6 747 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 TBC1D2BQ9UPU7 963 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 DNMBPQ6XZF7 1577 aa7.53□□□□□ -1.2
CDR2-203ENST00000563573 CUX1P39880 1505 aa7.52□□□□□ -1.2
CDR2-203ENST00000563573 SRSF11Q05519 484 aaKnown RBP7.52□□□□□ -1.21
CDR2-203ENST00000563573 SLFNL1Q499Z3 407 aa7.52□□□□□ -1.21
CDR2-203ENST00000563573 ESCO1Q5FWF5 840 aa7.52□□□□□ -1.21
CDR2-203ENST00000563573 RNFT1Q5M7Z0 435 aa7.52□□□□□ -1.21
CDR2-203ENST00000563573 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
CDR2-203ENST00000563573 ARHGEF10LQ9HCE6 1279 aa7.52□□□□□ -1.21
CDR2-203ENST00000563573 MRC2Q9UBG0 1479 aa7.51□□□□□ -1.21
CDR2-203ENST00000563573 SOX11P35716 441 aa7.51□□□□□ -1.21
CDR2-203ENST00000563573 KCNMA1Q12791 1236 aa7.51□□□□□ -1.21
CDR2-203ENST00000563573 POU4F2Q12837 409 aa7.51□□□□□ -1.21
CDR2-203ENST00000563573 NBPF10Q6P3W6 841 aaKnown RBP7.51□□□□□ -1.21
CDR2-203ENST00000563573 RIPOR1Q6ZS17 1223 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms