RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
CPSF7-224ENST00000544990 CD163L1Q9NR16 1453 aa10.25□□□□□ -0.77
CPSF7-224ENST00000544990 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
CPSF7-224ENST00000544990 ARHGEF1Q92888 912 aaKnown RBP10.25□□□□□ -0.77
CPSF7-224ENST00000544990 GLI3P10071 1580 aa10.25□□□□□ -0.77
CPSF7-224ENST00000544990 A0A1W2PP64 1363 aa10.25□□□□□ -0.77
CPSF7-224ENST00000544990 EDC4Q6P2E9 1401 aaKnown RBP10.24□□□□□ -0.77
CPSF7-224ENST00000544990 SLIT3O75094 1523 aa10.24□□□□□ -0.77
CPSF7-224ENST00000544990 STRN4Q9NRL3 753 aa10.24□□□□□ -0.77
CPSF7-224ENST00000544990 A0A0G2JS52 829 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 G3V3G9 751 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 ONECUT3O60422 494 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-224ENST00000544990 MYT1Q01538 1121 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 UPF1Q92900 1129 aaKnown RBP eCLIP10.23□□□□□ -0.77
CPSF7-224ENST00000544990 SPATA31A5Q5VU36 1347 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 SPATA31A7Q8IWB4 1347 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 ANKRD36BQ8N2N9 1353 aa10.23□□□□□ -0.77
CPSF7-224ENST00000544990 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
CPSF7-224ENST00000544990 FAM98CQ17RN3 349 aaKnown RBP10.22□□□□□ -0.77
CPSF7-224ENST00000544990 NME9Q86XW9 330 aa10.22□□□□□ -0.77
CPSF7-224ENST00000544990 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
CPSF7-224ENST00000544990 AATKQ6ZMQ8 1374 aa10.22□□□□□ -0.77
CPSF7-224ENST00000544990 LMO7Q8WWI1 1683 aa10.22□□□□□ -0.77
CPSF7-224ENST00000544990 CAMTA1Q9Y6Y1 1673 aa10.22□□□□□ -0.77
CPSF7-224ENST00000544990 EVX2Q03828 476 aa10.21□□□□□ -0.77
CPSF7-224ENST00000544990 ARHGEF25Q86VW2 580 aa10.21□□□□□ -0.77
CPSF7-224ENST00000544990 SPATA31A1Q5TZJ5 1347 aa10.21□□□□□ -0.78
CPSF7-224ENST00000544990 USP54Q70EL1 1684 aa10.21□□□□□ -0.78
CPSF7-224ENST00000544990 BRWD3Q6RI45 1802 aa10.21□□□□□ -0.78
CPSF7-224ENST00000544990 LARP1Q6PKG0 1096 aaKnown RBP10.2□□□□□ -0.78
CPSF7-224ENST00000544990 COG3Q96JB2 828 aa10.2□□□□□ -0.78
CPSF7-224ENST00000544990 POLR3GLQ9BT43 218 aa10.2□□□□□ -0.78
CPSF7-224ENST00000544990 USP35Q9P2H5 1018 aa10.2□□□□□ -0.78
CPSF7-224ENST00000544990 THRAP3Q9Y2W1 955 aaKnown RBP10.2□□□□□ -0.78
CPSF7-224ENST00000544990 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
CPSF7-224ENST00000544990 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
CPSF7-224ENST00000544990 TCP11L2Q8N4U5 519 aa10.19□□□□□ -0.78
CPSF7-224ENST00000544990 CRISPLD2Q9H0B8 497 aa10.19□□□□□ -0.78
CPSF7-224ENST00000544990 COL18A1P39060 1754 aa10.19□□□□□ -0.78
CPSF7-224ENST00000544990 RGPD5Q99666 1765 aa10.19□□□□□ -0.78
CPSF7-224ENST00000544990 NFAT5O94916 1531 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 COL5A2P05997 1499 aaPredicted RBP10.18□□□□□ -0.78
CPSF7-224ENST00000544990 CRB1P82279 1406 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 ATN1P54259 1190 aaPredicted RBP10.18□□□□□ -0.78
CPSF7-224ENST00000544990 MFSD10Q14728 455 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 IER5LQ5T953 404 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 TOM1L2Q6ZVM7 507 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 LTN1O94822 1766 aa10.18□□□□□ -0.78
CPSF7-224ENST00000544990 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 WDR17Q8IZU2 1322 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 ATMINO43313 823 aaPredicted RBP10.17□□□□□ -0.78
CPSF7-224ENST00000544990 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 MYOM1P52179 1685 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 ABCC6O95255 1503 aa10.17□□□□□ -0.78
CPSF7-224ENST00000544990 FYB1O15117 783 aa10.16□□□□□ -0.78
CPSF7-224ENST00000544990 PDE3BQ13370 1112 aa10.16□□□□□ -0.78
CPSF7-224ENST00000544990 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
CPSF7-224ENST00000544990 DCBLD2Q96PD2 775 aa10.16□□□□□ -0.78
CPSF7-224ENST00000544990 KIF20BQ96Q89 1820 aa10.16□□□□□ -0.78
CPSF7-224ENST00000544990 THSD7AQ9UPZ6 1657 aa10.15□□□□□ -0.78
CPSF7-224ENST00000544990 PLCG2P16885 1265 aa10.15□□□□□ -0.78
CPSF7-224ENST00000544990 ASTLQ6HA08 431 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-224ENST00000544990 GGNBP2Q9H3C7 697 aa10.15□□□□□ -0.78
CPSF7-224ENST00000544990 CGNL1Q0VF96 1302 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 AMPHP49418 695 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 TMC2Q8TDI7 906 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 IP6K1Q92551 441 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 CDCA7Q9BWT1 371 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-224ENST00000544990 CARD10Q9BWT7 1032 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 CARD14Q9BXL6 1004 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 GPHNQ9NQX3 736 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-224ENST00000544990 NSD3Q9BZ95 1437 aa10.14□□□□□ -0.79
CPSF7-224ENST00000544990 ERBB3P21860 1342 aa10.13□□□□□ -0.79
CPSF7-224ENST00000544990 GABBR2O75899 941 aa10.13□□□□□ -0.79
CPSF7-224ENST00000544990 SMYD5Q6GMV2 418 aa10.13□□□□□ -0.79
CPSF7-224ENST00000544990 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
CPSF7-224ENST00000544990 FAM196AQ6ZSG2 479 aa10.13□□□□□ -0.79
CPSF7-224ENST00000544990 BLMP54132 1417 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-224ENST00000544990 CCDC7Q96M83 1385 aa10.13□□□□□ -0.79
CPSF7-224ENST00000544990 MAP3K19Q56UN5 1328 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 C11orf95C9JLR9 678 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-224ENST00000544990 SEC24BO95487 1268 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 DDB1Q16531 1140 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 ANKRD24Q8TF21 1146 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-224ENST00000544990 PANK3Q9H999 370 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 NLRP2Q9NX02 1062 aa10.12□□□□□ -0.79
CPSF7-224ENST00000544990 PARP4Q9UKK3 1724 aaKnown RBP10.12□□□□□ -0.79
CPSF7-224ENST00000544990 FBLN1P23142 703 aa10.11□□□□□ -0.79
CPSF7-224ENST00000544990 IRX5P78411 483 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-224ENST00000544990 PPP1R15BQ5SWA1 713 aa10.11□□□□□ -0.79
CPSF7-224ENST00000544990 FAM182BQ5T319 152 aa10.11□□□□□ -0.79
CPSF7-224ENST00000544990 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms