RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 SOBPA7XYQ1 873 aa11.07□□□□□ -0.64
TTR-203ENST00000541025 APBB1O00213 710 aa11.07□□□□□ -0.64
TTR-203ENST00000541025 MCCD1P59942 119 aaPredicted RBP11.06□□□□□ -0.64
TTR-203ENST00000541025 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
TTR-203ENST00000541025 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
TTR-203ENST00000541025 SPINT1O43278 529 aa11.05□□□□□ -0.64
TTR-203ENST00000541025 TTLL8A6PVC2 850 aa11.04□□□□□ -0.64
TTR-203ENST00000541025 ERVH48-1M5A8F1 160 aa11.04□□□□□ -0.64
TTR-203ENST00000541025 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.04□□□□□ -0.64
TTR-203ENST00000541025 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
TTR-203ENST00000541025 TMPRSS4Q9NRS4 437 aa11.04□□□□□ -0.64
TTR-203ENST00000541025 PBRM1Q86U86 1689 aa11.04□□□□□ -0.64
TTR-203ENST00000541025 CHD1O14646 1710 aa11.04□□□□□ -0.64
TTR-203ENST00000541025 SOGA1O94964 1423 aa11.03□□□□□ -0.64
TTR-203ENST00000541025 FBXO45P0C2W1 286 aa11.03□□□□□ -0.64
TTR-203ENST00000541025 VEGFBP49765 207 aa11.03□□□□□ -0.64
TTR-203ENST00000541025 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
TTR-203ENST00000541025 AQRO60306 1485 aaKnown RBP eCLIP11.02□□□□□ -0.65
TTR-203ENST00000541025 RAB15P59190 212 aa11.02□□□□□ -0.65
TTR-203ENST00000541025 NR1H3Q13133 447 aa11.02□□□□□ -0.65
TTR-203ENST00000541025 MTMR14Q8NCE2 650 aa11.02□□□□□ -0.65
TTR-203ENST00000541025 ZNF330Q9Y3S2 320 aaPredicted RBP11.02□□□□□ -0.65
TTR-203ENST00000541025 PCDHB9Q9Y5E1 797 aa11.02□□□□□ -0.65
TTR-203ENST00000541025 NDUFB9Q9Y6M9 179 aa11.02□□□□□ -0.65
TTR-203ENST00000541025 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
TTR-203ENST00000541025 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
TTR-203ENST00000541025 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
TTR-203ENST00000541025 ABCA5Q8WWZ7 1642 aa11□□□□□ -0.65
TTR-203ENST00000541025 LILRA1O75019 489 aa11□□□□□ -0.65
TTR-203ENST00000541025 GIGYF1O75420 1035 aaPredicted RBP11□□□□□ -0.65
TTR-203ENST00000541025 GMPRP36959 345 aa11□□□□□ -0.65
TTR-203ENST00000541025 RNF20Q5VTR2 975 aa11□□□□□ -0.65
TTR-203ENST00000541025 FIGNL2A6NMB9 653 aa10.99□□□□□ -0.65
TTR-203ENST00000541025 PPFIA3O75145 1194 aa10.99□□□□□ -0.65
TTR-203ENST00000541025 ADD1P35611 737 aaKnown RBP10.99□□□□□ -0.65
TTR-203ENST00000541025 RELBQ01201 579 aa10.99□□□□□ -0.65
TTR-203ENST00000541025 AGBL1Q96MI9 1066 aa10.99□□□□□ -0.65
TTR-203ENST00000541025 STK17AQ9UEE5 414 aa10.99□□□□□ -0.65
TTR-203ENST00000541025 ADH1AP07327 375 aa10.98□□□□□ -0.65
TTR-203ENST00000541025 VSIG8P0DPA2 414 aa10.98□□□□□ -0.65
TTR-203ENST00000541025 PRM3Q9NNZ6 103 aa10.98□□□□□ -0.65
TTR-203ENST00000541025 ERBB4Q15303 1308 aa10.98□□□□□ -0.65
TTR-203ENST00000541025 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
TTR-203ENST00000541025 PTGIRP43119 386 aa10.97□□□□□ -0.65
TTR-203ENST00000541025 ABCA10Q8WWZ4 1543 aa10.97□□□□□ -0.65
TTR-203ENST00000541025 CTSOP43234 321 aaPredicted RBP10.95□□□□□ -0.66
TTR-203ENST00000541025 PTSQ03393 145 aa10.95□□□□□ -0.66
TTR-203ENST00000541025 INSM2Q96T92 566 aaPredicted RBP10.95□□□□□ -0.66
TTR-203ENST00000541025 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
TTR-203ENST00000541025 GPR37L1O60883 481 aa10.94□□□□□ -0.66
TTR-203ENST00000541025 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
TTR-203ENST00000541025 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
TTR-203ENST00000541025 POLMQ9NP87 494 aaPredicted RBP10.93□□□□□ -0.66
TTR-203ENST00000541025 CYLDQ9NQC7 956 aa10.93□□□□□ -0.66
TTR-203ENST00000541025 GAPVD1Q14C86 1478 aa10.93□□□□□ -0.66
TTR-203ENST00000541025 GRIN2BQ13224 1484 aa10.91□□□□□ -0.66
TTR-203ENST00000541025 SLC35F4A4IF30 521 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 FAM181BA6NEQ2 426 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 ERVK-9P63128 1117 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 CC2D2BQ6DHV5 1058 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 ZSCAN1Q8NBB4 408 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 RNF217Q8TC41 542 aa10.9□□□□□ -0.66
TTR-203ENST00000541025 MAGI1Q96QZ7 1491 aaPredicted RBP10.89□□□□□ -0.67
TTR-203ENST00000541025 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
TTR-203ENST00000541025 ADAMTS12P58397 1594 aa10.88□□□□□ -0.67
TTR-203ENST00000541025 NANOS1Q8WY41 292 aaKnown RBP10.88□□□□□ -0.67
TTR-203ENST00000541025 CEP126Q9P2H0 1117 aa10.88□□□□□ -0.67
TTR-203ENST00000541025 LORP23490 312 aaPredicted RBP10.87□□□□□ -0.67
TTR-203ENST00000541025 RNF144AP50876 292 aaPredicted RBP10.87□□□□□ -0.67
TTR-203ENST00000541025 TBC1D2BQ9UPU7 963 aa10.87□□□□□ -0.67
TTR-203ENST00000541025 GPC1P35052 558 aa10.86□□□□□ -0.67
TTR-203ENST00000541025 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
TTR-203ENST00000541025 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
TTR-203ENST00000541025 LYSMD3Q7Z3D4 306 aa10.86□□□□□ -0.67
TTR-203ENST00000541025 ESF1Q9H501 851 aaKnown RBP10.86□□□□□ -0.67
TTR-203ENST00000541025 PCDHB11Q9Y5F2 797 aa10.86□□□□□ -0.67
TTR-203ENST00000541025 SYNJ2O15056 1496 aa10.85□□□□□ -0.67
TTR-203ENST00000541025 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
TTR-203ENST00000541025 RIMBP3CA6NJZ7 1639 aa10.84□□□□□ -0.67
TTR-203ENST00000541025 RIMBP3BA6NNM3 1639 aa10.84□□□□□ -0.67
TTR-203ENST00000541025 RIMBP3Q9UFD9 1639 aa10.84□□□□□ -0.67
TTR-203ENST00000541025 CYP2U1Q7Z449 544 aa10.84□□□□□ -0.67
TTR-203ENST00000541025 CLASP1Q7Z460 1538 aa10.84□□□□□ -0.67
TTR-203ENST00000541025 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
TTR-203ENST00000541025 ITGA6P23229 1130 aa10.83□□□□□ -0.68
TTR-203ENST00000541025 TRAK2O60296 914 aa10.82□□□□□ -0.68
TTR-203ENST00000541025 IRF5Q13568 498 aa10.82□□□□□ -0.68
TTR-203ENST00000541025 GPR161Q8N6U8 529 aaKnown RBP10.82□□□□□ -0.68
TTR-203ENST00000541025 MEN1O00255 615 aa10.81□□□□□ -0.68
TTR-203ENST00000541025 SCTRP47872 440 aa10.81□□□□□ -0.68
TTR-203ENST00000541025 SV2AQ7L0J3 742 aa10.81□□□□□ -0.68
TTR-203ENST00000541025 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
TTR-203ENST00000541025 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
TTR-203ENST00000541025 SENP3-EIF4A1A0A087X0R7 540 aa10.8□□□□□ -0.68
TTR-203ENST00000541025 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
TTR-203ENST00000541025 PRICKLE2Q7Z3G6 844 aa10.8□□□□□ -0.68
TTR-203ENST00000541025 VWA5B2Q8N398 1253 aa10.8□□□□□ -0.68
TTR-203ENST00000541025 CEP170Q5SW79 1584 aa10.8□□□□□ -0.68
TTR-203ENST00000541025 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms