RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 TSC1Q92574 1164 aa8.87□□□□□ -0.99
LDHC-206ENST00000539369 INSM2Q96T92 566 aaPredicted RBP8.87□□□□□ -0.99
LDHC-206ENST00000539369 CELA2BP08218 269 aaPredicted RBP8.86□□□□□ -0.99
LDHC-206ENST00000539369 BCANQ96GW7 911 aa8.86□□□□□ -0.99
LDHC-206ENST00000539369 PGPEP1Q9NXJ5 209 aa8.86□□□□□ -0.99
LDHC-206ENST00000539369 SOGA1O94964 1423 aa8.86□□□□□ -0.99
LDHC-206ENST00000539369 SRSF11Q05519 484 aaKnown RBP8.85□□□□□ -0.99
LDHC-206ENST00000539369 RNF217Q8TC41 542 aa8.85□□□□□ -0.99
LDHC-206ENST00000539369 CHMP7Q8WUX9 453 aaPredicted RBP8.85□□□□□ -0.99
LDHC-206ENST00000539369 SPOCK3Q9BQ16 436 aa8.85□□□□□ -0.99
LDHC-206ENST00000539369 CUEDC1Q9NWM3 386 aaPredicted RBP8.85□□□□□ -0.99
LDHC-206ENST00000539369 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
LDHC-206ENST00000539369 NUTM2BA6NNL0 878 aaPredicted RBP8.84□□□□□ -0.99
LDHC-206ENST00000539369 NUTM2EB1AL46 878 aaPredicted RBP8.84□□□□□ -0.99
LDHC-206ENST00000539369 SYNJ1O43426 1573 aa8.84□□□□□ -0.99
LDHC-206ENST00000539369 RELBQ01201 579 aa8.84□□□□□ -0.99
LDHC-206ENST00000539369 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
LDHC-206ENST00000539369 NUTM2DQ5VT03 806 aaPredicted RBP8.84□□□□□ -0.99
LDHC-206ENST00000539369 NUTM2AQ8IVF1 878 aaPredicted RBP8.84□□□□□ -0.99
LDHC-206ENST00000539369 DCAF5Q96JK2 942 aa8.84□□□□□ -0.99
LDHC-206ENST00000539369 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
LDHC-206ENST00000539369 MSTNO14793 375 aa8.83□□□□□ -1
LDHC-206ENST00000539369 PROCP04070 461 aa8.83□□□□□ -1
LDHC-206ENST00000539369 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
LDHC-206ENST00000539369 CNTNAP5Q8WYK1 1306 aa8.82□□□□□ -1
LDHC-206ENST00000539369 LILRB3O75022 631 aa8.82□□□□□ -1
LDHC-206ENST00000539369 CLK2P49760 499 aaKnown RBP8.82□□□□□ -1
LDHC-206ENST00000539369 KCTD15Q96SI1 283 aaPredicted RBP8.82□□□□□ -1
LDHC-206ENST00000539369 SLC24A1O60721 1099 aa8.81□□□□□ -1
LDHC-206ENST00000539369 MAP3K10Q02779 954 aa8.81□□□□□ -1
LDHC-206ENST00000539369 RSPH6AQ9H0K4 717 aa8.81□□□□□ -1
LDHC-206ENST00000539369 ZNF395Q9H8N7 513 aaPredicted RBP8.81□□□□□ -1
LDHC-206ENST00000539369 POLMQ9NP87 494 aaPredicted RBP8.81□□□□□ -1
LDHC-206ENST00000539369 SYNJ2O15056 1496 aa8.81□□□□□ -1
LDHC-206ENST00000539369 FGD5Q6ZNL6 1462 aa8.81□□□□□ -1
LDHC-206ENST00000539369 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
LDHC-206ENST00000539369 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
LDHC-206ENST00000539369 POLR3EQ9NVU0 708 aa8.8□□□□□ -1
LDHC-206ENST00000539369 GRIN2BQ13224 1484 aa8.8□□□□□ -1
LDHC-206ENST00000539369 INTS6LQ5JSJ4 861 aaKnown RBP8.79□□□□□ -1
LDHC-206ENST00000539369 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
LDHC-206ENST00000539369 WDR97A6NE52 1622 aa8.79□□□□□ -1
LDHC-206ENST00000539369 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
LDHC-206ENST00000539369 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
LDHC-206ENST00000539369 ERCC6L2Q5T890 1561 aa8.78□□□□□ -1
LDHC-206ENST00000539369 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
LDHC-206ENST00000539369 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
LDHC-206ENST00000539369 CUX1P39880 1505 aa8.76□□□□□ -1.01
LDHC-206ENST00000539369 SLC10A4Q96EP9 437 aa8.76□□□□□ -1.01
LDHC-206ENST00000539369 OCSTAMPQ9BR26 566 aa8.76□□□□□ -1.01
LDHC-206ENST00000539369 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
LDHC-206ENST00000539369 DHX9Q08211 1270 aaKnown RBP8.75□□□□□ -1.01
LDHC-206ENST00000539369 PDXDC2PQ6P474 469 aa8.75□□□□□ -1.01
LDHC-206ENST00000539369 ENAMQ9NRM1 1142 aa8.75□□□□□ -1.01
LDHC-206ENST00000539369 TMPRSS4Q9NRS4 437 aa8.75□□□□□ -1.01
LDHC-206ENST00000539369 PHF20L1A8MW92 1017 aa8.74□□□□□ -1.01
LDHC-206ENST00000539369 ZNF837Q96EG3 531 aaPredicted RBP8.74□□□□□ -1.01
LDHC-206ENST00000539369 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
LDHC-206ENST00000539369 GPR25O00155 361 aa8.73□□□□□ -1.01
LDHC-206ENST00000539369 ADD1P35611 737 aaKnown RBP8.73□□□□□ -1.01
LDHC-206ENST00000539369 ZNF784Q8NCA9 323 aaPredicted RBP8.73□□□□□ -1.01
LDHC-206ENST00000539369 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
LDHC-206ENST00000539369 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
LDHC-206ENST00000539369 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
LDHC-206ENST00000539369 IGF1RP08069 1367 aa8.73□□□□□ -1.01
LDHC-206ENST00000539369 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.72□□□□□ -1.01
LDHC-206ENST00000539369 LILRA1O75019 489 aa8.72□□□□□ -1.01
LDHC-206ENST00000539369 ADH1AP07327 375 aa8.72□□□□□ -1.01
LDHC-206ENST00000539369 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
LDHC-206ENST00000539369 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
LDHC-206ENST00000539369 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
LDHC-206ENST00000539369 BEND7Q8N7W2 519 aaPredicted RBP8.72□□□□□ -1.01
LDHC-206ENST00000539369 BCRP11274 1271 aa8.71□□□□□ -1.02
LDHC-206ENST00000539369 LYSMD3Q7Z3D4 306 aa8.71□□□□□ -1.02
LDHC-206ENST00000539369 ACDQ96AP0 544 aa8.71□□□□□ -1.02
LDHC-206ENST00000539369 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.02
LDHC-206ENST00000539369 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
LDHC-206ENST00000539369 PBRM1Q86U86 1689 aa8.71□□□□□ -1.02
LDHC-206ENST00000539369 GRIN2AQ12879 1464 aa8.7□□□□□ -1.02
LDHC-206ENST00000539369 CEP170Q5SW79 1584 aa8.7□□□□□ -1.02
LDHC-206ENST00000539369 PTGIRP43119 386 aa8.7□□□□□ -1.02
LDHC-206ENST00000539369 NUP160Q12769 1436 aa8.7□□□□□ -1.02
LDHC-206ENST00000539369 K7ELQ4 463 aaPredicted RBP8.69□□□□□ -1.02
LDHC-206ENST00000539369 RHOQP17081 205 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 DBN1Q16643 649 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 FBXO31Q5XUX0 539 aaPredicted RBP8.69□□□□□ -1.02
LDHC-206ENST00000539369 ZBTB33Q86T24 672 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 TRIM22Q8IYM9 498 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 Q8N3U1 123 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 GALNT6Q8NCL4 622 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 PROCA1Q8NCQ7 364 aaPredicted RBP8.69□□□□□ -1.02
LDHC-206ENST00000539369 LRRN4Q8WUT4 740 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
LDHC-206ENST00000539369 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
LDHC-206ENST00000539369 ABCA10Q8WWZ4 1543 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 ABCA5Q8WWZ7 1642 aa8.69□□□□□ -1.02
LDHC-206ENST00000539369 PRICKLE2Q7Z3G6 844 aa8.68□□□□□ -1.02
LDHC-206ENST00000539369 NEDD1Q8NHV4 660 aa8.68□□□□□ -1.02
LDHC-206ENST00000539369 KIF13AQ9H1H9 1805 aa8.68□□□□□ -1.02
LDHC-206ENST00000539369 PODNQ7Z5L7 613 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms