RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 THAP11Q96EK4 314 aa8.14□□□□□ -1.11
SPIDR-226ENST00000524157 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-226ENST00000524157 NUDT12Q9BQG2 462 aa8.14□□□□□ -1.11
SPIDR-226ENST00000524157 DNMT3AQ9Y6K1 912 aaPredicted RBP8.14□□□□□ -1.11
SPIDR-226ENST00000524157 SFI1A8K8P3 1242 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 SCAMP3O14828 347 aaKnown RBP8.13□□□□□ -1.11
SPIDR-226ENST00000524157 FGD1P98174 961 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 ECM1Q16610 540 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 MSS51Q4VC12 460 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 HINFPQ9BQA5 517 aa8.13□□□□□ -1.11
SPIDR-226ENST00000524157 SMARCA5O60264 1052 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-226ENST00000524157 DXOO77932 396 aaKnown RBP8.12□□□□□ -1.11
SPIDR-226ENST00000524157 COL26A1Q96A83 441 aa8.12□□□□□ -1.11
SPIDR-226ENST00000524157 PPP1R1BQ9UD71 204 aaPredicted RBP8.12□□□□□ -1.11
SPIDR-226ENST00000524157 SEPT3Q9UH03 358 aa8.12□□□□□ -1.11
SPIDR-226ENST00000524157 M0R2N6 131 aa8.11□□□□□ -1.11
SPIDR-226ENST00000524157 WEE1P30291 646 aa8.11□□□□□ -1.11
SPIDR-226ENST00000524157 MRPL58Q14197 206 aaKnown RBP8.11□□□□□ -1.11
SPIDR-226ENST00000524157 NYAP1Q6ZVC0 841 aa8.11□□□□□ -1.11
SPIDR-226ENST00000524157 SH3BP5LQ7L8J4 393 aa8.11□□□□□ -1.11
SPIDR-226ENST00000524157 MKNK1Q9BUB5 465 aa8.11□□□□□ -1.11
SPIDR-226ENST00000524157 BACH2Q9BYV9 841 aa8.11□□□□□ -1.11
SPIDR-226ENST00000524157 FAM13AO94988 1023 aa8.1□□□□□ -1.11
SPIDR-226ENST00000524157 USP4Q13107 963 aa8.1□□□□□ -1.11
SPIDR-226ENST00000524157 HELQQ8TDG4 1101 aa8.1□□□□□ -1.11
SPIDR-226ENST00000524157 RBCK1Q9BYM8 510 aa8.1□□□□□ -1.11
SPIDR-226ENST00000524157 PCDHB3Q9Y5E6 796 aa8.1□□□□□ -1.11
SPIDR-226ENST00000524157 PCDHGA11Q9Y5H2 935 aa8.1□□□□□ -1.11
SPIDR-226ENST00000524157 FKBP5Q13451 457 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-226ENST00000524157 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
SPIDR-226ENST00000524157 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-226ENST00000524157 NDUFB5O43674 189 aa8.08□□□□□ -1.12
SPIDR-226ENST00000524157 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
SPIDR-226ENST00000524157 NPR3P17342 541 aa8.08□□□□□ -1.12
SPIDR-226ENST00000524157 NCLP19338 710 aaKnown RBP8.08□□□□□ -1.12
SPIDR-226ENST00000524157 MMP16P51512 607 aa8.08□□□□□ -1.12
SPIDR-226ENST00000524157 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
SPIDR-226ENST00000524157 MTMR3Q13615 1198 aa8.08□□□□□ -1.12
SPIDR-226ENST00000524157 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
SPIDR-226ENST00000524157 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-226ENST00000524157 APLP1P51693 650 aa8.07□□□□□ -1.12
SPIDR-226ENST00000524157 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
SPIDR-226ENST00000524157 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
SPIDR-226ENST00000524157 WNT2BQ93097 391 aa8.07□□□□□ -1.12
SPIDR-226ENST00000524157 FAM163AQ96GL9 167 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-226ENST00000524157 FOXO3O43524 673 aa8.06□□□□□ -1.12
SPIDR-226ENST00000524157 TMC7Q7Z402 723 aa8.06□□□□□ -1.12
SPIDR-226ENST00000524157 TSEN2Q8NCE0 465 aaKnown RBP8.06□□□□□ -1.12
SPIDR-226ENST00000524157 CITED4Q96RK1 184 aa8.06□□□□□ -1.12
SPIDR-226ENST00000524157 CARD14Q9BXL6 1004 aa8.06□□□□□ -1.12
SPIDR-226ENST00000524157 UNC93B1Q9H1C4 597 aa8.06□□□□□ -1.12
SPIDR-226ENST00000524157 CADPSQ9ULU8 1353 aa8.06□□□□□ -1.12
SPIDR-226ENST00000524157 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 TREHO43280 583 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-226ENST00000524157 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.12
SPIDR-226ENST00000524157 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 PIK3R5Q8WYR1 880 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 SLC10A4Q96EP9 437 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 SPSB2Q99619 263 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 MRS2Q9HD23 443 aa8.05□□□□□ -1.12
SPIDR-226ENST00000524157 LGR5O75473 907 aa8.04□□□□□ -1.12
SPIDR-226ENST00000524157 IGFBP4P22692 258 aa8.04□□□□□ -1.12
SPIDR-226ENST00000524157 SEPT12Q8IYM1 358 aa8.04□□□□□ -1.12
SPIDR-226ENST00000524157 BRPF3Q9ULD4 1205 aa8.04□□□□□ -1.12
SPIDR-226ENST00000524157 PCDHB11Q9Y5F2 797 aa8.04□□□□□ -1.12
SPIDR-226ENST00000524157 PRPF40AO75400 957 aaKnown RBP8.03□□□□□ -1.12
SPIDR-226ENST00000524157 MYCP01106 439 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-226ENST00000524157 NAA30Q147X3 362 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-226ENST00000524157 ERFEQ4G0M1 354 aa8.03□□□□□ -1.12
SPIDR-226ENST00000524157 CAPN12Q6ZSI9 719 aa8.03□□□□□ -1.12
SPIDR-226ENST00000524157 BPHLQ86WA6 291 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-226ENST00000524157 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
SPIDR-226ENST00000524157 TMEM87AQ8NBN3 555 aa8.03□□□□□ -1.12
SPIDR-226ENST00000524157 DMRTB1Q96MA1 342 aa8.03□□□□□ -1.12
SPIDR-226ENST00000524157 METTL5Q9NRN9 209 aaKnown RBP8.03□□□□□ -1.12
SPIDR-226ENST00000524157 PCDH10Q9P2E7 1040 aa8.03□□□□□ -1.12
SPIDR-226ENST00000524157 BCAMP50895 628 aa8.02□□□□□ -1.13
SPIDR-226ENST00000524157 ANKRD13DQ6ZTN6 518 aa8.02□□□□□ -1.13
SPIDR-226ENST00000524157 PURBQ96QR8 312 aaKnown RBP8.02□□□□□ -1.13
SPIDR-226ENST00000524157 TANGO6Q9C0B7 1094 aa8.02□□□□□ -1.13
SPIDR-226ENST00000524157 CDV3Q9UKY7 258 aaKnown RBP8.02□□□□□ -1.13
SPIDR-226ENST00000524157 ESPNB1AK53 854 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 LDHBP07195 334 aaKnown RBP8.01□□□□□ -1.13
SPIDR-226ENST00000524157 RAD51AP2Q09MP3 1159 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 C9orf131Q5VYM1 1079 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 ALKBH2Q6NS38 261 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 TMC1Q8TDI8 760 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 VTI1AQ96AJ9 217 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 PRKD2Q9BZL6 878 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 TGIF2Q9GZN2 237 aa8.01□□□□□ -1.13
SPIDR-226ENST00000524157 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.01□□□□□ -1.13
SPIDR-226ENST00000524157 SORBS3O60504 671 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 MPSTP25325 297 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 ATP2B2Q01814 1243 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 PLCB3Q01970 1234 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 AGERQ15109 404 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms