RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
SPIDR-226ENST00000524157 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
SPIDR-226ENST00000524157 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
SPIDR-226ENST00000524157 SENP3Q9H4L4 574 aaPredicted RBP15.66■□□□□ 0.1
SPIDR-226ENST00000524157 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
SPIDR-226ENST00000524157 FOXD1Q16676 465 aa14.35□□□□□ -0.11
SPIDR-226ENST00000524157 ADRA2BP18089 450 aa14.17□□□□□ -0.14
SPIDR-226ENST00000524157 PPP6R1Q9UPN7 881 aa14.16□□□□□ -0.14
SPIDR-226ENST00000524157 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
SPIDR-226ENST00000524157 KCNA4P22459 653 aa13.95□□□□□ -0.18
SPIDR-226ENST00000524157 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
SPIDR-226ENST00000524157 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
SPIDR-226ENST00000524157 CSRNP3Q8WYN3 585 aa13.5□□□□□ -0.25
SPIDR-226ENST00000524157 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
SPIDR-226ENST00000524157 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
SPIDR-226ENST00000524157 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
SPIDR-226ENST00000524157 MSH5O43196 834 aa13.18□□□□□ -0.3
SPIDR-226ENST00000524157 CNKSR2Q8WXI2 1034 aa13.11□□□□□ -0.31
SPIDR-226ENST00000524157 NPM3O75607 178 aaKnown RBP13.1□□□□□ -0.31
SPIDR-226ENST00000524157 DNAJC5BQ9UF47 199 aa12.92□□□□□ -0.34
SPIDR-226ENST00000524157 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
SPIDR-226ENST00000524157 ZBTB22O15209 634 aa12.82□□□□□ -0.36
SPIDR-226ENST00000524157 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-226ENST00000524157 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
SPIDR-226ENST00000524157 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
SPIDR-226ENST00000524157 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
SPIDR-226ENST00000524157 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
SPIDR-226ENST00000524157 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
SPIDR-226ENST00000524157 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
SPIDR-226ENST00000524157 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
SPIDR-226ENST00000524157 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
SPIDR-226ENST00000524157 MYCNP04198 464 aaPredicted RBP12.18□□□□□ -0.46
SPIDR-226ENST00000524157 FKBP8Q14318 412 aa12.18□□□□□ -0.46
SPIDR-226ENST00000524157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
SPIDR-226ENST00000524157 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
SPIDR-226ENST00000524157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPIDR-226ENST00000524157 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-226ENST00000524157 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
SPIDR-226ENST00000524157 APLP2Q06481 763 aa11.72□□□□□ -0.53
SPIDR-226ENST00000524157 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-226ENST00000524157 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
SPIDR-226ENST00000524157 ATF5Q9Y2D1 282 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-226ENST00000524157 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
SPIDR-226ENST00000524157 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
SPIDR-226ENST00000524157 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
SPIDR-226ENST00000524157 BCANQ96GW7 911 aa11.49□□□□□ -0.57
SPIDR-226ENST00000524157 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
SPIDR-226ENST00000524157 VSIG10Q8N0Z9 540 aa11.36□□□□□ -0.59
SPIDR-226ENST00000524157 VASPP50552 380 aaPredicted RBP11.34□□□□□ -0.59
SPIDR-226ENST00000524157 SPDYE4A6NLX3 237 aa11.33□□□□□ -0.6
SPIDR-226ENST00000524157 TAOK2Q9UL54 1235 aa11.33□□□□□ -0.6
SPIDR-226ENST00000524157 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
SPIDR-226ENST00000524157 FBLN2P98095 1184 aa11.29□□□□□ -0.6
SPIDR-226ENST00000524157 PROM2Q8N271 834 aa11.28□□□□□ -0.6
SPIDR-226ENST00000524157 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
SPIDR-226ENST00000524157 C1QBPQ07021 282 aaKnown RBP11.25□□□□□ -0.61
SPIDR-226ENST00000524157 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-226ENST00000524157 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-226ENST00000524157 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-226ENST00000524157 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
SPIDR-226ENST00000524157 PKD2Q13563 968 aa11.18□□□□□ -0.62
SPIDR-226ENST00000524157 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
SPIDR-226ENST00000524157 POLA2Q14181 598 aa11.16□□□□□ -0.62
SPIDR-226ENST00000524157 SPINK5Q9NQ38 1064 aaPredicted RBP11.16□□□□□ -0.62
SPIDR-226ENST00000524157 CAPN15O75808 1086 aa11.14□□□□□ -0.63
SPIDR-226ENST00000524157 TPRNQ4KMQ1 711 aa11.14□□□□□ -0.63
SPIDR-226ENST00000524157 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-226ENST00000524157 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
SPIDR-226ENST00000524157 PAXIP1Q6ZW49 1069 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-226ENST00000524157 CFAP44Q96MT7 982 aa11□□□□□ -0.65
SPIDR-226ENST00000524157 ECM2O94769 699 aaPredicted RBP10.99□□□□□ -0.65
SPIDR-226ENST00000524157 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
SPIDR-226ENST00000524157 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
SPIDR-226ENST00000524157 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
SPIDR-226ENST00000524157 KLHL34Q8N239 644 aa10.94□□□□□ -0.66
SPIDR-226ENST00000524157 SPRYD3Q8NCJ5 442 aa10.92□□□□□ -0.66
SPIDR-226ENST00000524157 STAG3Q9UJ98 1225 aa10.9□□□□□ -0.66
SPIDR-226ENST00000524157 SPDYE2BA6NHP3 402 aa10.89□□□□□ -0.67
SPIDR-226ENST00000524157 ABCB7O75027 752 aa10.89□□□□□ -0.67
SPIDR-226ENST00000524157 SPDYE6P0CI01 402 aa10.89□□□□□ -0.67
SPIDR-226ENST00000524157 SPDYE2Q495Y8 402 aa10.89□□□□□ -0.67
SPIDR-226ENST00000524157 DSG3P32926 999 aa10.88□□□□□ -0.67
SPIDR-226ENST00000524157 ZNF692Q9BU19 519 aaPredicted RBP10.84□□□□□ -0.67
SPIDR-226ENST00000524157 TSHZ2Q9NRE2 1034 aa10.84□□□□□ -0.67
SPIDR-226ENST00000524157 NBR1Q14596 966 aa10.83□□□□□ -0.68
SPIDR-226ENST00000524157 RGL2O15211 777 aa10.82□□□□□ -0.68
SPIDR-226ENST00000524157 SSUH2Q9Y2M2 353 aa10.82□□□□□ -0.68
SPIDR-226ENST00000524157 DNAJC5Q9H3Z4 198 aa10.76□□□□□ -0.69
SPIDR-226ENST00000524157 PLCD3Q8N3E9 789 aa10.75□□□□□ -0.69
SPIDR-226ENST00000524157 CHGAP10645 457 aaKnown RBP10.73□□□□□ -0.69
SPIDR-226ENST00000524157 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
SPIDR-226ENST00000524157 OSCARQ8IYS5 282 aa10.72□□□□□ -0.69
SPIDR-226ENST00000524157 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
SPIDR-226ENST00000524157 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPIDR-226ENST00000524157 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
SPIDR-226ENST00000524157 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
SPIDR-226ENST00000524157 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
SPIDR-226ENST00000524157 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
SPIDR-226ENST00000524157 MIER1Q8N108 512 aa10.65□□□□□ -0.7
SPIDR-226ENST00000524157 PLEKHG5O94827 1062 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms