RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-215	ENST00000521798	PBX2	P40425	430 aa		10.9	□□□□□ -0.66
SPIDR-215	ENST00000521798	EGFL7	Q9UHF1	273 aa		10.9	□□□□□ -0.66
SPIDR-215	ENST00000521798	NOD1	Q9Y239	953 aa		10.9	□□□□□ -0.66
SPIDR-215	ENST00000521798	CCNYL3	P0C7X3	344 aa		10.89	□□□□□ -0.67
SPIDR-215	ENST00000521798	NBPF14	Q5TI25	921 aa		10.89	□□□□□ -0.67
SPIDR-215	ENST00000521798	SIX5	Q8N196	739 aa		10.89	□□□□□ -0.67
SPIDR-215	ENST00000521798	LARGE2	Q8N3Y3	721 aa		10.89	□□□□□ -0.67
SPIDR-215	ENST00000521798	AXIN2	Q9Y2T1	843 aa		10.89	□□□□□ -0.67
SPIDR-215	ENST00000521798	CTTNBP2	Q8WZ74	1663 aa		10.89	□□□□□ -0.67
SPIDR-215	ENST00000521798	KIF21B	O75037	1637 aa		10.88	□□□□□ -0.67
SPIDR-215	ENST00000521798	DKK1	O94907	266 aa		10.88	□□□□□ -0.67
SPIDR-215	ENST00000521798	CARMIL2	Q6F5E8	1435 aa		10.88	□□□□□ -0.67
SPIDR-215	ENST00000521798	SCUBE3	Q8IX30	993 aa		10.88	□□□□□ -0.67
SPIDR-215	ENST00000521798	TCF3	P15923	654 aa		10.87	□□□□□ -0.67
SPIDR-215	ENST00000521798	TAS1R3	Q7RTX0	852 aa		10.87	□□□□□ -0.67
SPIDR-215	ENST00000521798	EVA1B	Q9NVM1	165 aa		10.87	□□□□□ -0.67
SPIDR-215	ENST00000521798	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.87	□□□□□ -0.67
SPIDR-215	ENST00000521798	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.87	□□□□□ -0.67
SPIDR-215	ENST00000521798	TNIK	Q9UKE5	1360 aa		10.87	□□□□□ -0.67
SPIDR-215	ENST00000521798	OCLN	Q16625	522 aa		10.86	□□□□□ -0.67
SPIDR-215	ENST00000521798	ADAM32	Q8TC27	787 aa		10.86	□□□□□ -0.67
SPIDR-215	ENST00000521798	KIAA1024	Q9UPX6	916 aa		10.86	□□□□□ -0.67
SPIDR-215	ENST00000521798	PTPRG	P23470	1445 aa		10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	KIAA0556	O60303	1618 aa		10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	PRMT3	O60678	531 aa		10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	NR1I2	O75469	434 aa		10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	VAMP1	P23763	118 aa		10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	MSS51	Q4VC12	460 aa		10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	ZNF326	Q5BKZ1	582 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798	VARS2	Q5ST30	1063 aa	Known RBP	10.85	□□□□□ -0.67
SPIDR-215	ENST00000521798		H3BRB1	525 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	ZBTB7B	O15156	539 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	DXO	O77932	396 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	SEC13	P55735	322 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	TSGA10IP	Q3SY00	556 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	SP7	Q8TDD2	431 aa	Predicted RBP	10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	NUDT12	Q9BQG2	462 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	ARHGAP9	Q9BRR9	750 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	TUT1	Q9H6E5	874 aa	Known RBP	10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	DOLK	Q9UPQ8	538 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	ERBB3	P21860	1342 aa		10.84	□□□□□ -0.67
SPIDR-215	ENST00000521798	ICMT	O60725	284 aa		10.83	□□□□□ -0.68
SPIDR-215	ENST00000521798	ABL1	P00519	1130 aa		10.83	□□□□□ -0.68
SPIDR-215	ENST00000521798	MRPL50	Q8N5N7	158 aa	Known RBP	10.83	□□□□□ -0.68
SPIDR-215	ENST00000521798	GOLGA3	Q08378	1498 aa		10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	GTF2I	P78347	998 aa		10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	ZNF211	Q13398	564 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	FBXO33	Q7Z6M2	555 aa		10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	PCDHB3	Q9Y5E6	796 aa		10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	ADCY10	Q96PN6	1610 aa		10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.82	□□□□□ -0.68
SPIDR-215	ENST00000521798	TK2	O00142	265 aa		10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	APLP1	P51693	650 aa		10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	POTEH	Q6S545	545 aa		10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	ZBTB33	Q86T24	672 aa		10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	GLYCTK	Q8IVS8	523 aa		10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	PRIMPOL	Q96LW4	560 aa		10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	RBM19	Q9Y4C8	960 aa	Known RBP	10.81	□□□□□ -0.68
SPIDR-215	ENST00000521798	MMP16	P51512	607 aa		10.8	□□□□□ -0.68
SPIDR-215	ENST00000521798	SH3BP5L	Q7L8J4	393 aa		10.8	□□□□□ -0.68
SPIDR-215	ENST00000521798	SAMD9	Q5K651	1589 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	UACA	Q9BZF9	1416 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	C21orf2	O43822	256 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	OXLD1	Q5BKU9	147 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	CCDC102B	Q68D86	513 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	DZIP3	Q86Y13	1208 aa	Known RBP	10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	C8orf37	Q96NL8	207 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	ASB16	Q96NS5	453 aa		10.79	□□□□□ -0.68
SPIDR-215	ENST00000521798	PPP4C	P60510	307 aa		10.78	□□□□□ -0.68
SPIDR-215	ENST00000521798	FAM160A2	Q8N612	972 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-215	ENST00000521798	TPCN2	Q8NHX9	752 aa		10.78	□□□□□ -0.68
SPIDR-215	ENST00000521798	UHRF1BP1L	A0JNW5	1464 aa		10.78	□□□□□ -0.68
SPIDR-215	ENST00000521798	SFI1	A8K8P3	1242 aa		10.77	□□□□□ -0.69
SPIDR-215	ENST00000521798	MAPK1	P28482	360 aa		10.77	□□□□□ -0.69
SPIDR-215	ENST00000521798	ANO2	Q9NQ90	1003 aa		10.77	□□□□□ -0.69
SPIDR-215	ENST00000521798	DCTN4	Q9UJW0	460 aa		10.77	□□□□□ -0.69
SPIDR-215	ENST00000521798	PLB1	Q6P1J6	1458 aa		10.76	□□□□□ -0.69
SPIDR-215	ENST00000521798	ABCC2	Q92887	1545 aa		10.76	□□□□□ -0.69
SPIDR-215	ENST00000521798	HMGB1	P09429	215 aa	Known RBP	10.76	□□□□□ -0.69
SPIDR-215	ENST00000521798	HPS5	Q9UPZ3	1129 aa		10.76	□□□□□ -0.69
SPIDR-215	ENST00000521798	MAPKBP1	O60336	1514 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	COL19A1	Q14993	1142 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	ECM1	Q16610	540 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	ZNF687	Q8N1G0	1237 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	ANKK1	Q8NFD2	765 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	SPSB2	Q99619	263 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	PCDHGA11	Q9Y5H2	935 aa		10.75	□□□□□ -0.69
SPIDR-215	ENST00000521798	ABCA8	O94911	1581 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	SOWAHB	A6NEL2	793 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	RECK	O95980	971 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	SF3B2	Q13435	895 aa	Known RBP	10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	RNF20	Q5VTR2	975 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	UNC93B1	Q9H1C4	597 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	PRDM9	Q9NQV7	894 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	FHOD3	Q2V2M9	1422 aa		10.74	□□□□□ -0.69
SPIDR-215	ENST00000521798	GIGYF1	O75420	1035 aa	Predicted RBP	10.73	□□□□□ -0.69
SPIDR-215	ENST00000521798	ARHGAP4	P98171	946 aa		10.73	□□□□□ -0.69
SPIDR-215	ENST00000521798	TAGLN	Q01995	201 aa	Known RBP	10.73	□□□□□ -0.69

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