RNA–Protein interactions for RNA: ENST00000518173.5

PTK2-208, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-208	ENST00000518173	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PTK2-208	ENST00000518173	AXIN2	Q9Y2T1	843 aa		11.21	□□□□□ -0.61
PTK2-208	ENST00000518173	COL5A2	P05997	1499 aa	Predicted RBP	11.2	□□□□□ -0.62
PTK2-208	ENST00000518173	WDR17	Q8IZU2	1322 aa		11.2	□□□□□ -0.62
PTK2-208	ENST00000518173	LARP1	Q6PKG0	1096 aa	Known RBP	11.2	□□□□□ -0.62
PTK2-208	ENST00000518173	TCP11L2	Q8N4U5	519 aa		11.2	□□□□□ -0.62
PTK2-208	ENST00000518173	KIF24	Q5T7B8	1368 aa		11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	CGNL1	Q0VF96	1302 aa		11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	C11orf95	C9JLR9	678 aa	Predicted RBP	11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	FAM98C	Q17RN3	349 aa	Known RBP	11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	IP6K1	Q92551	441 aa		11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	CARD10	Q9BWT7	1032 aa		11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	STRN4	Q9NRL3	753 aa		11.19	□□□□□ -0.62
PTK2-208	ENST00000518173	CRB1	P82279	1406 aa		11.18	□□□□□ -0.62
PTK2-208	ENST00000518173	COL18A1	P39060	1754 aa		11.18	□□□□□ -0.62
PTK2-208	ENST00000518173	SEC24B	O95487	1268 aa		11.18	□□□□□ -0.62
PTK2-208	ENST00000518173	KRT27	Q7Z3Y8	459 aa		11.18	□□□□□ -0.62
PTK2-208	ENST00000518173	BLM	P54132	1417 aa	Predicted RBP	11.18	□□□□□ -0.62
PTK2-208	ENST00000518173	IER5L	Q5T953	404 aa		11.17	□□□□□ -0.62
PTK2-208	ENST00000518173	GGNBP2	Q9H3C7	697 aa		11.17	□□□□□ -0.62
PTK2-208	ENST00000518173	PANK3	Q9H999	370 aa		11.17	□□□□□ -0.62
PTK2-208	ENST00000518173	ERBB3	P21860	1342 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	KIF7	Q2M1P5	1343 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	PSEN1	P49768	467 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	NSD3	Q9BZ95	1437 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	RTL1	A6NKG5	1358 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	NSD2	O96028	1365 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	CCDC7	Q96M83	1385 aa		11.16	□□□□□ -0.62
PTK2-208	ENST00000518173	MAP3K19	Q56UN5	1328 aa		11.15	□□□□□ -0.62
PTK2-208	ENST00000518173	MYOM1	P52179	1685 aa		11.15	□□□□□ -0.62
PTK2-208	ENST00000518173	POTEB2	H3BUK9	544 aa		11.15	□□□□□ -0.62
PTK2-208	ENST00000518173	SOX12	O15370	315 aa		11.15	□□□□□ -0.62
PTK2-208	ENST00000518173	PDAP1	Q13442	181 aa	Known RBP	11.15	□□□□□ -0.62
PTK2-208	ENST00000518173	TOM1L2	Q6ZVM7	507 aa		11.15	□□□□□ -0.62
PTK2-208	ENST00000518173	THSD7A	Q9UPZ6	1657 aa		11.14	□□□□□ -0.63
PTK2-208	ENST00000518173	HOXC9	P31274	260 aa		11.14	□□□□□ -0.63
PTK2-208	ENST00000518173	ZBTB7C	A1YPR0	619 aa		11.13	□□□□□ -0.63
PTK2-208	ENST00000518173	PER1	O15534	1290 aa	Predicted RBP	11.13	□□□□□ -0.63
PTK2-208	ENST00000518173	CSB-PGBD3	P0DP91	1061 aa		11.13	□□□□□ -0.63
PTK2-208	ENST00000518173	GOLGA2	Q08379	1002 aa		11.13	□□□□□ -0.63
PTK2-208	ENST00000518173	FAM196A	Q6ZSG2	479 aa		11.13	□□□□□ -0.63
PTK2-208	ENST00000518173	POLR3GL	Q9BT43	218 aa		11.13	□□□□□ -0.63
PTK2-208	ENST00000518173	AMPH	P49418	695 aa		11.12	□□□□□ -0.63
PTK2-208	ENST00000518173	PDE3B	Q13370	1112 aa		11.12	□□□□□ -0.63
PTK2-208	ENST00000518173	ANKRD24	Q8TF21	1146 aa		11.12	□□□□□ -0.63
PTK2-208	ENST00000518173	USP35	Q9P2H5	1018 aa		11.12	□□□□□ -0.63
PTK2-208	ENST00000518173	KNSTRN	Q9Y448	316 aa		11.12	□□□□□ -0.63
PTK2-208	ENST00000518173	INSR	P06213	1382 aa		11.12	□□□□□ -0.63
PTK2-208	ENST00000518173	DISP2	A7MBM2	1401 aa		11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	BCL9	O00512	1426 aa		11.11	□□□□□ -0.63
PTK2-208	ENST00000518173		A0A0G2JS52	829 aa		11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	MYT1	Q01538	1121 aa		11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	COLQ	Q9Y215	455 aa	Predicted RBP	11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	FLT4	P35916	1363 aa		11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	NPC1L1	Q9UHC9	1359 aa		11.11	□□□□□ -0.63
PTK2-208	ENST00000518173	WASHC2A	Q641Q2	1341 aa		11.1	□□□□□ -0.63
PTK2-208	ENST00000518173	POTEF	A5A3E0	1075 aa		11.1	□□□□□ -0.63
PTK2-208	ENST00000518173	FBLN1	P23142	703 aa		11.1	□□□□□ -0.63
PTK2-208	ENST00000518173	RRS1	Q15050	365 aa	Known RBP	11.1	□□□□□ -0.63
PTK2-208	ENST00000518173	DDB1	Q16531	1140 aa		11.1	□□□□□ -0.63
PTK2-208	ENST00000518173	NLRP2	Q9NX02	1062 aa		11.1	□□□□□ -0.63
PTK2-208	ENST00000518173	EXOC5	O00471	708 aa		11.09	□□□□□ -0.63
PTK2-208	ENST00000518173	PLCG2	P16885	1265 aa		11.09	□□□□□ -0.63
PTK2-208	ENST00000518173	POLK	Q9UBT6	870 aa		11.09	□□□□□ -0.63
PTK2-208	ENST00000518173	IL2RB	P14784	551 aa		11.08	□□□□□ -0.64
PTK2-208	ENST00000518173	ZEB1	P37275	1124 aa	Predicted RBP	11.08	□□□□□ -0.64
PTK2-208	ENST00000518173	MKRN3	Q13064	507 aa	Known RBP	11.08	□□□□□ -0.64
PTK2-208	ENST00000518173	MAMSTR	Q6ZN01	415 aa		11.08	□□□□□ -0.64
PTK2-208	ENST00000518173	BRWD3	Q6RI45	1802 aa		11.07	□□□□□ -0.64
PTK2-208	ENST00000518173	SF3B2	Q13435	895 aa	Known RBP	11.07	□□□□□ -0.64
PTK2-208	ENST00000518173	HSP90AB2P	Q58FF8	381 aa		11.07	□□□□□ -0.64
PTK2-208	ENST00000518173	OTUD5	Q96G74	571 aa		11.07	□□□□□ -0.64
PTK2-208	ENST00000518173	KIF20B	Q96Q89	1820 aa		11.07	□□□□□ -0.64
PTK2-208	ENST00000518173	PARP4	Q9UKK3	1724 aa	Known RBP	11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	LTN1	O94822	1766 aa		11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	RIOK3	O14730	519 aa	Known RBP	11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	NBPF6	Q5VWK0	638 aa		11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	MORC1	Q86VD1	984 aa		11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	NBPF4	Q96M43	638 aa		11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	EMILIN1	Q9Y6C2	1016 aa		11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	SMG6	Q86US8	1419 aa	Known RBP	11.06	□□□□□ -0.64
PTK2-208	ENST00000518173	PLEKHG2	Q9H7P9	1386 aa		11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	OVOS2	A0A0G2JMS6	1433 aa		11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	ECM2	O94769	699 aa	Predicted RBP	11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	BAG6	P46379	1132 aa		11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	IRX5	P78411	483 aa	Predicted RBP	11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	NCAPD2	Q15021	1401 aa		11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	MARCH10	Q8NA82	808 aa	Predicted RBP	11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	RGPD5	Q99666	1765 aa		11.05	□□□□□ -0.64
PTK2-208	ENST00000518173	FAM208A	Q9UK61	1670 aa	Known RBP	11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	PARD3	Q8TEW0	1356 aa		11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	TNS2	Q63HR2	1409 aa		11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	POTEJ	P0CG39	1038 aa		11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	LTV1	Q96GA3	475 aa	Predicted RBP	11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	OCEL1	Q9H607	264 aa		11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	SCUBE2	Q9NQ36	999 aa		11.04	□□□□□ -0.64
PTK2-208	ENST00000518173	PLSCR1	O15162	318 aa		11.03	□□□□□ -0.64
PTK2-208	ENST00000518173	FAM182B	Q5T319	152 aa		11.03	□□□□□ -0.64

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