RNA–Protein interactions for RNA: ENST00000510362.5

RETREG1-206, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best)

Gene RETREG1, Length 1,054 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-206ENST00000510362 LRCH3Q96II8 777 aa13.37□□□□□ -0.27
RETREG1-206ENST00000510362 MPHOSPH9Q99550 1183 aa13.36□□□□□ -0.27
RETREG1-206ENST00000510362 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.36□□□□□ -0.27
RETREG1-206ENST00000510362 NWD1Q149M9 1564 aa13.36□□□□□ -0.27
RETREG1-206ENST00000510362 ANKK1Q8NFD2 765 aa13.35□□□□□ -0.27
RETREG1-206ENST00000510362 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
RETREG1-206ENST00000510362 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
RETREG1-206ENST00000510362 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
RETREG1-206ENST00000510362 ZNF326Q5BKZ1 582 aaKnown RBP13.34□□□□□ -0.27
RETREG1-206ENST00000510362 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
RETREG1-206ENST00000510362 TBC1D2Q9BYX2 928 aa13.34□□□□□ -0.27
RETREG1-206ENST00000510362 CHD2O14647 1828 aaKnown RBP13.34□□□□□ -0.27
RETREG1-206ENST00000510362 CCDC144AA2RUR9 1427 aa13.33□□□□□ -0.28
RETREG1-206ENST00000510362 GCGRP47871 477 aa13.33□□□□□ -0.28
RETREG1-206ENST00000510362 SPIRE2Q8WWL2 714 aa13.33□□□□□ -0.28
RETREG1-206ENST00000510362 WNT2BQ93097 391 aa13.33□□□□□ -0.28
RETREG1-206ENST00000510362 RSPH6AQ9H0K4 717 aa13.33□□□□□ -0.28
RETREG1-206ENST00000510362 NKTRP30414 1462 aaKnown RBP13.33□□□□□ -0.28
RETREG1-206ENST00000510362 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
RETREG1-206ENST00000510362 SOWAHBA6NEL2 793 aa13.32□□□□□ -0.28
RETREG1-206ENST00000510362 HRCP23327 699 aa13.32□□□□□ -0.28
RETREG1-206ENST00000510362 MYSM1Q5VVJ2 828 aa13.32□□□□□ -0.28
RETREG1-206ENST00000510362 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
RETREG1-206ENST00000510362 PPLO60437 1756 aa13.32□□□□□ -0.28
RETREG1-206ENST00000510362 XIRP1Q702N8 1843 aaKnown RBP13.32□□□□□ -0.28
RETREG1-206ENST00000510362 KCNA6P17658 529 aa13.31□□□□□ -0.28
RETREG1-206ENST00000510362 BCAMP50895 628 aa13.31□□□□□ -0.28
RETREG1-206ENST00000510362 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
RETREG1-206ENST00000510362 NUTM1Q86Y26 1132 aa13.31□□□□□ -0.28
RETREG1-206ENST00000510362 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
RETREG1-206ENST00000510362 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
RETREG1-206ENST00000510362 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
RETREG1-206ENST00000510362 CFHP08603 1231 aa13.3□□□□□ -0.28
RETREG1-206ENST00000510362 SKIV2LQ15477 1246 aaKnown RBP13.3□□□□□ -0.28
RETREG1-206ENST00000510362 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
RETREG1-206ENST00000510362 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
RETREG1-206ENST00000510362 KDM4AO75164 1064 aa13.29□□□□□ -0.28
RETREG1-206ENST00000510362 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
RETREG1-206ENST00000510362 IFT172Q9UG01 1749 aa13.29□□□□□ -0.28
RETREG1-206ENST00000510362 RPGRIP1LQ68CZ1 1315 aa13.29□□□□□ -0.28
RETREG1-206ENST00000510362 TOM1O60784 492 aa13.28□□□□□ -0.28
RETREG1-206ENST00000510362 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
RETREG1-206ENST00000510362 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
RETREG1-206ENST00000510362 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
RETREG1-206ENST00000510362 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
RETREG1-206ENST00000510362 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
RETREG1-206ENST00000510362 SETD1AO15047 1707 aaKnown RBP13.25□□□□□ -0.29
RETREG1-206ENST00000510362 XRN1Q8IZH2 1706 aaKnown RBP13.25□□□□□ -0.29
RETREG1-206ENST00000510362 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
RETREG1-206ENST00000510362 TMEM94Q12767 1356 aa13.25□□□□□ -0.29
RETREG1-206ENST00000510362 MOXD2PA6NHM9 499 aa13.25□□□□□ -0.29
RETREG1-206ENST00000510362 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
RETREG1-206ENST00000510362 KCTD12Q96CX2 325 aaKnown RBP13.25□□□□□ -0.29
RETREG1-206ENST00000510362 TSR3Q9UJK0 312 aaKnown RBP13.25□□□□□ -0.29
RETREG1-206ENST00000510362 ALKQ9UM73 1620 aa13.24□□□□□ -0.29
RETREG1-206ENST00000510362 HOXA2O43364 376 aa13.24□□□□□ -0.29
RETREG1-206ENST00000510362 PPP4CP60510 307 aa13.24□□□□□ -0.29
RETREG1-206ENST00000510362 USP46P62068 366 aa13.24□□□□□ -0.29
RETREG1-206ENST00000510362 THSD4Q6ZMP0 1018 aa13.24□□□□□ -0.29
RETREG1-206ENST00000510362 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
RETREG1-206ENST00000510362 PROCA1Q8NCQ7 364 aaPredicted RBP13.24□□□□□ -0.29
RETREG1-206ENST00000510362 LIMD1Q9UGP4 676 aa13.24□□□□□ -0.29
RETREG1-206ENST00000510362 NCOA3Q9Y6Q9 1424 aa13.23□□□□□ -0.29
RETREG1-206ENST00000510362 ANKRD30BQ9BXX2 1392 aa13.23□□□□□ -0.29
RETREG1-206ENST00000510362 FUT2Q10981 343 aa13.23□□□□□ -0.29
RETREG1-206ENST00000510362 KMT5BQ4FZB7 885 aa13.23□□□□□ -0.29
RETREG1-206ENST00000510362 RIC3Q7Z5B4 369 aa13.23□□□□□ -0.29
RETREG1-206ENST00000510362 NDUFV2P19404 249 aa13.22□□□□□ -0.29
RETREG1-206ENST00000510362 RSBN1LQ6PCB5 846 aaPredicted RBP13.22□□□□□ -0.29
RETREG1-206ENST00000510362 SPTLC1O15269 473 aa13.21□□□□□ -0.29
RETREG1-206ENST00000510362 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
RETREG1-206ENST00000510362 PTPRUQ92729 1446 aa13.21□□□□□ -0.3
RETREG1-206ENST00000510362 MSH6P52701 1360 aa13.2□□□□□ -0.3
RETREG1-206ENST00000510362 HLA-CQ95604 372 aa13.2□□□□□ -0.3
RETREG1-206ENST00000510362 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.2□□□□□ -0.3
RETREG1-206ENST00000510362 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
RETREG1-206ENST00000510362 AMOTL2Q9Y2J4 779 aa13.2□□□□□ -0.3
RETREG1-206ENST00000510362 LAMC1P11047 1609 aa13.2□□□□□ -0.3
RETREG1-206ENST00000510362 METP08581 1390 aa13.2□□□□□ -0.3
RETREG1-206ENST00000510362 MYOM2P54296 1465 aa13.19□□□□□ -0.3
RETREG1-206ENST00000510362 APLP1P51693 650 aa13.19□□□□□ -0.3
RETREG1-206ENST00000510362 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
RETREG1-206ENST00000510362 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
RETREG1-206ENST00000510362 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
RETREG1-206ENST00000510362 GJA5P36382 358 aa13.18□□□□□ -0.3
RETREG1-206ENST00000510362 GUCA2AQ02747 115 aa13.18□□□□□ -0.3
RETREG1-206ENST00000510362 PRR14Q9BWN1 585 aa13.18□□□□□ -0.3
RETREG1-206ENST00000510362 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
RETREG1-206ENST00000510362 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.18□□□□□ -0.3
RETREG1-206ENST00000510362 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
RETREG1-206ENST00000510362 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
RETREG1-206ENST00000510362 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
RETREG1-206ENST00000510362 TUSC1Q2TAM9 212 aa13.17□□□□□ -0.3
RETREG1-206ENST00000510362 DCCP43146 1447 aa13.16□□□□□ -0.3
RETREG1-206ENST00000510362 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
RETREG1-206ENST00000510362 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
RETREG1-206ENST00000510362 ADGRF5Q8IZF2 1346 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 FDX1P10109 184 aa13.15□□□□□ -0.3
RETREG1-206ENST00000510362 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms