RNA–Protein interactions for RNA: ENST00000507245.1

SMAD5-203, Transcript of SMAD family member 5, humanhuman

TSL 2

Gene SMAD5, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-203ENST00000507245 CDK15Q96Q40 435 aa9.89□□□□□ -0.83
SMAD5-203ENST00000507245 NOD1Q9Y239 953 aa9.89□□□□□ -0.83
SMAD5-203ENST00000507245 TLL2Q9Y6L7 1015 aa9.89□□□□□ -0.83
SMAD5-203ENST00000507245 FSHRP23945 695 aa9.88□□□□□ -0.83
SMAD5-203ENST00000507245 DHX9Q08211 1270 aaKnown RBP9.88□□□□□ -0.83
SMAD5-203ENST00000507245 USP4Q13107 963 aa9.88□□□□□ -0.83
SMAD5-203ENST00000507245 LARP1Q6PKG0 1096 aaKnown RBP9.88□□□□□ -0.83
SMAD5-203ENST00000507245 TRIM50Q86XT4 487 aa9.88□□□□□ -0.83
SMAD5-203ENST00000507245 CCDC85AQ96PX6 553 aaPredicted RBP9.88□□□□□ -0.83
SMAD5-203ENST00000507245 CHIC2Q9UKJ5 165 aa9.88□□□□□ -0.83
SMAD5-203ENST00000507245 BIVM-ERCC5R4GMW8 1640 aa9.88□□□□□ -0.83
SMAD5-203ENST00000507245 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
SMAD5-203ENST00000507245 MYCP01106 439 aaPredicted RBP9.87□□□□□ -0.83
SMAD5-203ENST00000507245 INTS6LQ5JSJ4 861 aaKnown RBP9.87□□□□□ -0.83
SMAD5-203ENST00000507245 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
SMAD5-203ENST00000507245 TRAF7Q6Q0C0 670 aa9.87□□□□□ -0.83
SMAD5-203ENST00000507245 SIAH2O43255 324 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 SOGA1O94964 1423 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 ADH1CP00326 375 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 RASA1P20936 1047 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 ATP1A2P50993 1020 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 SRPK2P78362 688 aaKnown RBP9.86□□□□□ -0.83
SMAD5-203ENST00000507245 NR5A1Q13285 461 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 TSGA10IPQ3SY00 556 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 RETREG2Q8NC44 543 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 WASF2Q9Y6W5 498 aa9.86□□□□□ -0.83
SMAD5-203ENST00000507245 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMAD5-203ENST00000507245 ATG7O95352 703 aa9.85□□□□□ -0.83
SMAD5-203ENST00000507245 ALDH1A1P00352 501 aa9.85□□□□□ -0.83
SMAD5-203ENST00000507245 RBM19Q9Y4C8 960 aaKnown RBP9.85□□□□□ -0.83
SMAD5-203ENST00000507245 TOP2BQ02880 1626 aa9.85□□□□□ -0.83
SMAD5-203ENST00000507245 CHD1O14646 1710 aa9.85□□□□□ -0.83
SMAD5-203ENST00000507245 ERVH48-1M5A8F1 160 aa9.84□□□□□ -0.83
SMAD5-203ENST00000507245 GRM5P41594 1212 aa9.84□□□□□ -0.83
SMAD5-203ENST00000507245 TTC24A2A3L6 582 aaPredicted RBP9.83□□□□□ -0.84
SMAD5-203ENST00000507245 FAM196BA6NMK8 535 aa9.83□□□□□ -0.84
SMAD5-203ENST00000507245 PSME1Q06323 249 aa9.83□□□□□ -0.84
SMAD5-203ENST00000507245 CCDC116Q8IYX3 515 aa9.83□□□□□ -0.84
SMAD5-203ENST00000507245 SNIP1Q8TAD8 396 aaKnown RBP9.83□□□□□ -0.84
SMAD5-203ENST00000507245 CDCA7Q9BWT1 371 aaPredicted RBP9.83□□□□□ -0.84
SMAD5-203ENST00000507245 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
SMAD5-203ENST00000507245 ABCA5Q8WWZ7 1642 aa9.82□□□□□ -0.84
SMAD5-203ENST00000507245 CYP4X1Q8N118 509 aa9.82□□□□□ -0.84
SMAD5-203ENST00000507245 OGFOD1Q8N543 542 aa9.82□□□□□ -0.84
SMAD5-203ENST00000507245 DNAAF2Q9NVR5 837 aaKnown RBP9.82□□□□□ -0.84
SMAD5-203ENST00000507245 SYNJ1O43426 1573 aa9.82□□□□□ -0.84
SMAD5-203ENST00000507245 PBRM1Q86U86 1689 aa9.82□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L15C9J2P7 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L10C9JJH3 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L13C9JLJ4 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L12C9JPN9 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L11C9JVI0 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L21D6R901 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L18D6R9N7 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L22D6RA61 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L17D6RBQ6 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L19D6RCP7 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L20D6RJB6 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 GTF2IP78347 998 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USP17L24Q0WX57 530 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 ELOAQ14241 798 aaKnown RBP9.81□□□□□ -0.84
SMAD5-203ENST00000507245 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 NOVA2Q9UNW9 492 aaKnown RBP9.81□□□□□ -0.84
SMAD5-203ENST00000507245 USTQ9Y2C2 406 aa9.81□□□□□ -0.84
SMAD5-203ENST00000507245 CRTC2Q53ET0 693 aaPredicted RBP9.8□□□□□ -0.84
SMAD5-203ENST00000507245 CC2D2BQ6DHV5 1058 aa9.8□□□□□ -0.84
SMAD5-203ENST00000507245 LARGE2Q8N3Y3 721 aa9.8□□□□□ -0.84
SMAD5-203ENST00000507245 WRNQ14191 1432 aaPredicted RBP eCLIP9.8□□□□□ -0.84
SMAD5-203ENST00000507245 MAGI1Q96QZ7 1491 aaPredicted RBP9.79□□□□□ -0.84
SMAD5-203ENST00000507245 TDRD9Q8NDG6 1382 aaKnown RBP9.79□□□□□ -0.84
SMAD5-203ENST00000507245 MYT1Q01538 1121 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 PTK7Q13308 1070 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 PPP1R26Q5T8A7 1209 aaPredicted RBP9.79□□□□□ -0.84
SMAD5-203ENST00000507245 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 ZNF594Q96JF6 807 aaPredicted RBP9.79□□□□□ -0.84
SMAD5-203ENST00000507245 CYLDQ9NQC7 956 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 GRIN2BQ13224 1484 aa9.79□□□□□ -0.84
SMAD5-203ENST00000507245 TNFRSF10AO00220 468 aa9.78□□□□□ -0.84
SMAD5-203ENST00000507245 NNTQ13423 1086 aa9.78□□□□□ -0.84
SMAD5-203ENST00000507245 ZNF784Q8NCA9 323 aaPredicted RBP9.78□□□□□ -0.84
SMAD5-203ENST00000507245 ERVK-9P63128 1117 aa9.77□□□□□ -0.85
SMAD5-203ENST00000507245 CLDN10P78369 228 aa9.77□□□□□ -0.85
SMAD5-203ENST00000507245 ANKMY2Q8IV38 441 aa9.77□□□□□ -0.85
SMAD5-203ENST00000507245 TRAIPQ9BWF2 469 aa9.77□□□□□ -0.85
SMAD5-203ENST00000507245 GAPVD1Q14C86 1478 aa9.77□□□□□ -0.85
SMAD5-203ENST00000507245 SNAPC4Q5SXM2 1469 aa9.77□□□□□ -0.85
SMAD5-203ENST00000507245 RIMBP3CA6NJZ7 1639 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 RIMBP3BA6NNM3 1639 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 RIMBP3Q9UFD9 1639 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 GDF9O60383 454 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 RGS20O76081 388 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 SCTRP47872 440 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 CCDC102BQ68D86 513 aa9.76□□□□□ -0.85
SMAD5-203ENST00000507245 NR3C2P08235 984 aa9.75□□□□□ -0.85
SMAD5-203ENST00000507245 DPYDQ12882 1025 aa9.75□□□□□ -0.85
SMAD5-203ENST00000507245 TPCN2Q8NHX9 752 aa9.75□□□□□ -0.85
SMAD5-203ENST00000507245 CLASP1Q7Z460 1538 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms