RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 PCGF5Q86SE9 256 aa8.62□□□□□ -1.03
NUP35-208ENST00000472844 METTL16Q86W50 562 aaKnown RBP8.62□□□□□ -1.03
NUP35-208ENST00000472844 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
NUP35-208ENST00000472844 FTSJ3Q8IY81 847 aaKnown RBP8.62□□□□□ -1.03
NUP35-208ENST00000472844 PRPF38AQ8NAV1 312 aaKnown RBP8.62□□□□□ -1.03
NUP35-208ENST00000472844 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.62□□□□□ -1.03
NUP35-208ENST00000472844 PPP1R12AO14974 1030 aaPredicted RBP8.61□□□□□ -1.03
NUP35-208ENST00000472844 ATP9BO43861 1147 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 EVA1CP58658 441 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 RIC3Q7Z5B4 369 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 TMEM87AQ8NBN3 555 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 TSC1Q92574 1164 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 ARHGEF10LQ9HCE6 1279 aa8.61□□□□□ -1.03
NUP35-208ENST00000472844 SYNJ2O15056 1496 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 PLCG2P16885 1265 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 IRX5P78411 483 aaPredicted RBP8.6□□□□□ -1.03
NUP35-208ENST00000472844 UBE4AQ14139 1066 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 NFE2L2Q16236 605 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 KANK4Q5T7N3 995 aaPredicted RBP8.6□□□□□ -1.03
NUP35-208ENST00000472844 TBC1D9Q6ZT07 1266 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 PRR7Q8TB68 274 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 MRFAP1L1Q96HT8 127 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 CABP2Q9NPB3 220 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 PEG3Q9GZU2 1588 aa8.6□□□□□ -1.03
NUP35-208ENST00000472844 GIGYF1O75420 1035 aaPredicted RBP8.59□□□□□ -1.03
NUP35-208ENST00000472844 PDGFRBP09619 1106 aa8.59□□□□□ -1.03
NUP35-208ENST00000472844 ENOX2Q16206 610 aaKnown RBP8.59□□□□□ -1.03
NUP35-208ENST00000472844 CCSAPQ6IQ19 270 aaPredicted RBP8.59□□□□□ -1.03
NUP35-208ENST00000472844 RNF34Q969K3 372 aa8.59□□□□□ -1.03
NUP35-208ENST00000472844 GJD4Q96KN9 370 aaPredicted RBP8.59□□□□□ -1.03
NUP35-208ENST00000472844 C8orf48Q96LL4 319 aa8.59□□□□□ -1.03
NUP35-208ENST00000472844 SFMBT1Q9UHJ3 866 aa8.59□□□□□ -1.03
NUP35-208ENST00000472844 CFAP69A5D8W1 941 aa8.58□□□□□ -1.04
NUP35-208ENST00000472844 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
NUP35-208ENST00000472844 CASC1Q6TDU7 716 aa8.58□□□□□ -1.04
NUP35-208ENST00000472844 FRMD6Q96NE9 622 aa8.58□□□□□ -1.04
NUP35-208ENST00000472844 CLASP1Q7Z460 1538 aa8.58□□□□□ -1.04
NUP35-208ENST00000472844 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 ENPP3O14638 875 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 CD53P19397 219 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 ATP2B4P23634 1241 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 MAN1A1P33908 653 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 POU5F1Q01860 360 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 ARID5AQ03989 594 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 SEMA3FQ13275 785 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 DHX8Q14562 1220 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 ZRSR2Q15696 482 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 CLP1Q92989 425 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 IL17RAQ96F46 866 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 ACBD3Q9H3P7 528 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 METTL5Q9NRN9 209 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 TYW1Q9NV66 732 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 MAP3K20Q9NYL2 800 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 SLAIN2Q9P270 581 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 TPX2Q9ULW0 747 aaKnown RBP8.57□□□□□ -1.04
NUP35-208ENST00000472844 PRKAB1Q9Y478 270 aa8.57□□□□□ -1.04
NUP35-208ENST00000472844 NRDCO43847 1150 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 PLIN1O60240 522 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 ITGAEP38570 1179 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 CNGB1Q14028 1251 aaPredicted RBP8.56□□□□□ -1.04
NUP35-208ENST00000472844 ODR4Q5SWX8 454 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 PDILTQ8N807 584 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 EPAS1Q99814 870 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 PAGR1Q9BTK6 254 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 NRBP1Q9UHY1 535 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 DCTN4Q9UJW0 460 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 SCINQ9Y6U3 715 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 ADGRL1O94910 1474 aa8.56□□□□□ -1.04
NUP35-208ENST00000472844 KDM6BO15054 1643 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 POU5F1BQ06416 359 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 CEP63Q96MT8 703 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 INO80BQ9C086 356 aaPredicted RBP8.55□□□□□ -1.04
NUP35-208ENST00000472844 TMX1Q9H3N1 280 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 OCEL1Q9H607 264 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 EGFL7Q9UHF1 273 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 FRMD4BQ9Y2L6 1034 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 GAPVD1Q14C86 1478 aa8.55□□□□□ -1.04
NUP35-208ENST00000472844 VIL1P09327 827 aaKnown RBP8.54□□□□□ -1.04
NUP35-208ENST00000472844 TNNI2P48788 182 aa8.54□□□□□ -1.04
NUP35-208ENST00000472844 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
NUP35-208ENST00000472844 ZKSCAN2Q63HK3 967 aa8.54□□□□□ -1.04
NUP35-208ENST00000472844 ICE2Q659A1 982 aa8.54□□□□□ -1.04
NUP35-208ENST00000472844 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
NUP35-208ENST00000472844 RELTQ969Z4 430 aa8.54□□□□□ -1.04
NUP35-208ENST00000472844 H3BRB1 525 aa8.53□□□□□ -1.04
NUP35-208ENST00000472844 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 ABL1P00519 1130 aa8.53□□□□□ -1.04
NUP35-208ENST00000472844 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
NUP35-208ENST00000472844 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
NUP35-208ENST00000472844 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
NUP35-208ENST00000472844 HELBQ8NG08 1087 aaPredicted RBP8.53□□□□□ -1.04
NUP35-208ENST00000472844 ZNF622Q969S3 477 aaKnown RBP eCLIP8.53□□□□□ -1.04
NUP35-208ENST00000472844 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
NUP35-208ENST00000472844 CEP89Q96ST8 783 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms