RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
NUP35-208ENST00000472844 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
NUP35-208ENST00000472844 SENP3Q9H4L4 574 aaPredicted RBP15.92■□□□□ 0.14
NUP35-208ENST00000472844 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
NUP35-208ENST00000472844 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
NUP35-208ENST00000472844 FOXD1Q16676 465 aa14.93□□□□□ -0.02
NUP35-208ENST00000472844 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
NUP35-208ENST00000472844 MSH5O43196 834 aa14.3□□□□□ -0.12
NUP35-208ENST00000472844 PLPPR3Q6T4P5 718 aa13.92□□□□□ -0.18
NUP35-208ENST00000472844 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
NUP35-208ENST00000472844 PIAS4Q8N2W9 510 aaPredicted RBP13.75□□□□□ -0.21
NUP35-208ENST00000472844 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
NUP35-208ENST00000472844 ADRA2BP18089 450 aa13.59□□□□□ -0.23
NUP35-208ENST00000472844 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
NUP35-208ENST00000472844 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
NUP35-208ENST00000472844 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.33
NUP35-208ENST00000472844 DAXXQ9UER7 740 aaPredicted RBP12.99□□□□□ -0.33
NUP35-208ENST00000472844 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
NUP35-208ENST00000472844 KCNA4P22459 653 aa12.89□□□□□ -0.35
NUP35-208ENST00000472844 CACNB1Q02641 598 aaPredicted RBP12.74□□□□□ -0.37
NUP35-208ENST00000472844 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
NUP35-208ENST00000472844 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
NUP35-208ENST00000472844 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
NUP35-208ENST00000472844 ARXQ96QS3 562 aa12.45□□□□□ -0.42
NUP35-208ENST00000472844 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
NUP35-208ENST00000472844 PRKCSHP14314 528 aaPredicted RBP12.42□□□□□ -0.42
NUP35-208ENST00000472844 BCANQ96GW7 911 aa12.25□□□□□ -0.45
NUP35-208ENST00000472844 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
NUP35-208ENST00000472844 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
NUP35-208ENST00000472844 TIMELESSQ9UNS1 1208 aa12.16□□□□□ -0.46
NUP35-208ENST00000472844 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
NUP35-208ENST00000472844 TTBK1Q5TCY1 1321 aaPredicted RBP12.11□□□□□ -0.47
NUP35-208ENST00000472844 RANGAP1P46060 587 aaPredicted RBP12.08□□□□□ -0.48
NUP35-208ENST00000472844 HOMEZQ8IX15 550 aa12.08□□□□□ -0.48
NUP35-208ENST00000472844 TULP1O00294 542 aaPredicted RBP12.05□□□□□ -0.48
NUP35-208ENST00000472844 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
NUP35-208ENST00000472844 TPRNQ4KMQ1 711 aa12.02□□□□□ -0.49
NUP35-208ENST00000472844 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.49
NUP35-208ENST00000472844 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
NUP35-208ENST00000472844 HOXD11P31277 338 aaPredicted RBP11.97□□□□□ -0.49
NUP35-208ENST00000472844 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
NUP35-208ENST00000472844 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
NUP35-208ENST00000472844 MYT1Q01538 1121 aa11.93□□□□□ -0.5
NUP35-208ENST00000472844 HAP1P54257 671 aaPredicted RBP11.92□□□□□ -0.5
NUP35-208ENST00000472844 APLP2Q06481 763 aa11.91□□□□□ -0.5
NUP35-208ENST00000472844 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
NUP35-208ENST00000472844 POTEHQ6S545 545 aa11.87□□□□□ -0.51
NUP35-208ENST00000472844 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
NUP35-208ENST00000472844 ZBTB22O15209 634 aa11.83□□□□□ -0.52
NUP35-208ENST00000472844 GTF3C3Q9Y5Q9 886 aa11.82□□□□□ -0.52
NUP35-208ENST00000472844 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
NUP35-208ENST00000472844 FKBP8Q14318 412 aa11.67□□□□□ -0.54
NUP35-208ENST00000472844 PODXL2Q9NZ53 605 aa11.65□□□□□ -0.54
NUP35-208ENST00000472844 DNAJC5BQ9UF47 199 aa11.58□□□□□ -0.56
NUP35-208ENST00000472844 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
NUP35-208ENST00000472844 TMEM132AQ24JP5 1023 aa11.55□□□□□ -0.56
NUP35-208ENST00000472844 C14orf37Q86TY3 774 aa11.51□□□□□ -0.57
NUP35-208ENST00000472844 KLHL34Q8N239 644 aa11.47□□□□□ -0.57
NUP35-208ENST00000472844 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
NUP35-208ENST00000472844 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
NUP35-208ENST00000472844 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.39□□□□□ -0.59
NUP35-208ENST00000472844 FBXO3Q9UK99 471 aa11.39□□□□□ -0.59
NUP35-208ENST00000472844 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
NUP35-208ENST00000472844 DCAF8L2P0C7V8 631 aa11.33□□□□□ -0.6
NUP35-208ENST00000472844 FBLN2P98095 1184 aa11.24□□□□□ -0.61
NUP35-208ENST00000472844 EIF5BO60841 1220 aaKnown RBP11.2□□□□□ -0.62
NUP35-208ENST00000472844 U3KPZ7 1027 aaPredicted RBP11.17□□□□□ -0.62
NUP35-208ENST00000472844 SUPT5HO00267 1087 aaKnown RBP11.15□□□□□ -0.62
NUP35-208ENST00000472844 NBR1Q14596 966 aa11.14□□□□□ -0.63
NUP35-208ENST00000472844 TRIM26Q12899 539 aaPredicted RBP11.13□□□□□ -0.63
NUP35-208ENST00000472844 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
NUP35-208ENST00000472844 DSG3P32926 999 aa11.07□□□□□ -0.64
NUP35-208ENST00000472844 ABCC9O60706 1549 aa11.04□□□□□ -0.64
NUP35-208ENST00000472844 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
NUP35-208ENST00000472844 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
NUP35-208ENST00000472844 BBXQ8WY36 941 aaPredicted RBP11.02□□□□□ -0.65
NUP35-208ENST00000472844 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
NUP35-208ENST00000472844 CFAP44Q96MT7 982 aa11□□□□□ -0.65
NUP35-208ENST00000472844 SPINK5Q9NQ38 1064 aaPredicted RBP11□□□□□ -0.65
NUP35-208ENST00000472844 CAPN15O75808 1086 aa10.98□□□□□ -0.65
NUP35-208ENST00000472844 HRCP23327 699 aa10.95□□□□□ -0.66
NUP35-208ENST00000472844 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.66
NUP35-208ENST00000472844 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
NUP35-208ENST00000472844 TSHZ2Q9NRE2 1034 aa10.89□□□□□ -0.67
NUP35-208ENST00000472844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
NUP35-208ENST00000472844 HNRNPUL2Q1KMD3 747 aaKnown RBP10.84□□□□□ -0.67
NUP35-208ENST00000472844 SPRYD3Q8NCJ5 442 aa10.81□□□□□ -0.68
NUP35-208ENST00000472844 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
NUP35-208ENST00000472844 PKD2Q13563 968 aa10.8□□□□□ -0.68
NUP35-208ENST00000472844 CCDC9Q9Y3X0 531 aaKnown RBP10.8□□□□□ -0.68
NUP35-208ENST00000472844 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
NUP35-208ENST00000472844 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
NUP35-208ENST00000472844 DNAJC5Q9H3Z4 198 aa10.77□□□□□ -0.69
NUP35-208ENST00000472844 LOC105371045A0A1W2PR82 267 aa10.76□□□□□ -0.69
NUP35-208ENST00000472844 NPM1P06748 294 aaKnown RBP eCLIP10.74□□□□□ -0.69
NUP35-208ENST00000472844 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
NUP35-208ENST00000472844 SHROOM4Q9ULL8 1493 aa10.73□□□□□ -0.69
NUP35-208ENST00000472844 ABCB7O75027 752 aa10.72□□□□□ -0.69
NUP35-208ENST00000472844 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.69
NUP35-208ENST00000472844 MYCNP04198 464 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms