RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 KRT28Q7Z3Y7 464 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 FMNL3Q8IVF7 1028 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 RUFY1Q96T51 708 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 ARHGAP5Q13017 1502 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 CCDC178Q5BJE1 867 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 JDP2Q8WYK2 163 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 PARP3Q9Y6F1 533 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 EIF2AK4Q9P2K8 1649 aaKnown RBP7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 GOLGA6L9A6NEM1 432 aa7.3□□□□□ -1.24
CCDC144A-212ENST00000470068 ZPR1O75312 459 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 TRIM21P19474 475 aaKnown RBP7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 NF2P35240 595 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 DEF6Q9H4E7 631 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 CEP131Q9UPN4 1083 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 CTDP1Q9Y5B0 961 aaPredicted RBP7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 KIF21AQ7Z4S6 1674 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 NCOA1Q15788 1441 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 RALYLQ86SE5 291 aaKnown RBP7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 FAM43AQ8N2R8 423 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 SMTNL1A8MU46 457 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 CLASRPQ8N2M8 674 aaKnown RBP7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 TRIM34Q9BYJ4 488 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 WDR62O43379 1518 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 TOPBP1Q92547 1522 aa7.29□□□□□ -1.24
CCDC144A-212ENST00000470068 ST20-MTHFSA0A0A6YYL1 179 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 EIF3DO15371 548 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 FGFR1OPO95684 399 aaKnown RBP7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 CCDC83Q8IWF9 413 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 C9orf78Q9NZ63 289 aaPredicted RBP7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 CFAP45Q9UL16 551 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 FAM177BA6PVY3 158 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 CCDC191Q8NCU4 936 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 ACSBG1Q96GR2 724 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 KIF14Q15058 1648 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 IQGAP2Q13576 1575 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 KDM2BQ8NHM5 1336 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 WDR7Q9Y4E6 1490 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 KCNH5Q8NCM2 988 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 TMED8Q6PL24 325 aaPredicted RBP7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 NACAP1Q9BZK3 213 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 LRRC27Q9C0I9 530 aa7.28□□□□□ -1.24
CCDC144A-212ENST00000470068 CCDC57Q2TAC2 916 aa7.27□□□□□ -1.24
CCDC144A-212ENST00000470068 TSHZ2Q9NRE2 1034 aa7.27□□□□□ -1.24
CCDC144A-212ENST00000470068 NOL7Q9UMY1 257 aaKnown RBP7.27□□□□□ -1.24
CCDC144A-212ENST00000470068 BIVM-ERCC5R4GMW8 1640 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 NKTRP30414 1462 aaKnown RBP7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 FEZ1Q99689 392 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 TMEM106CQ9BVX2 250 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 SH2B1Q9NRF2 756 aaPredicted RBP7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 MNS1Q8NEH6 495 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 RALGAPBQ86X10 1494 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 BMP15O95972 392 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 RFC4P35249 363 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 SPATA31A6Q5VVP1 1343 aa7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 EPRSP07814 1512 aaKnown RBP7.27□□□□□ -1.25
CCDC144A-212ENST00000470068 C22orf23Q9BZE7 217 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 CCDC171Q6TFL3 1326 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 ITSN2Q9NZM3 1697 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 KCNA6P17658 529 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 CREBRFQ8IUR6 639 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 ZNF710Q8N1W2 664 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 CACNA1GO43497 2377 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 RRP12Q5JTH9 1297 aaKnown RBP7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 WWC2Q6AWC2 1192 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 BABAM1Q9NWV8 329 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 SHANK2Q9UPX8 1470 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 ANKRD45Q5TZF3 282 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 TTC21BQ7Z4L5 1316 aa7.26□□□□□ -1.25
CCDC144A-212ENST00000470068 UBTFL1P0CB47 393 aaPredicted RBP7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 CETN2P41208 172 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 HSP90AB3PQ58FF7 597 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 TEX13AQ9BXU3 409 aaPredicted RBP7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 GJA3Q9Y6H8 435 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 ERBINQ96RT1 1412 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 CCDC196A0A1B0GTZ2 297 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 ECM2O94769 699 aaPredicted RBP7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 GNAI2P04899 355 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 CCDC192P0DO97 292 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 INCENPQ9NQS7 918 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 MAGEC2Q9UBF1 373 aaPredicted RBP7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 NT5C2P49902 561 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 AMOTQ4VCS5 1084 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 ARHGAP45Q92619 1136 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 SPG7Q9UQ90 795 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 KINO60870 393 aaKnown RBP7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 TRIM22Q8IYM9 498 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 TRAK1Q9UPV9 953 aa7.25□□□□□ -1.25
CCDC144A-212ENST00000470068 ARHGEF12Q9NZN5 1544 aa7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 A6NNZ2 444 aa7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 CASTP20810 708 aaKnown RBP7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 TUBB8Q3ZCM7 444 aa7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 MAP9Q49MG5 647 aa7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 FAM182BQ5T319 152 aa7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 UPF1Q92900 1129 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC144A-212ENST00000470068 RIPK4P57078 832 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms