RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 PLPP6Q8IY26 295 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 DHX38Q92620 1227 aaKnown RBP5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 MYO5CQ9NQX4 1742 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 BRD4O60885 1362 aaPredicted RBP5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 SAMD9LQ8IVG5 1584 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 IGBP1P78318 339 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 ARAP3Q8WWN8 1544 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 ANKRD50Q9ULJ7 1429 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 CLASP1Q7Z460 1538 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 ATP10BO94823 1461 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 PLEKHH2Q8IVE3 1493 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 RAD51AP2Q09MP3 1159 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 TTLL12Q14166 644 aaPredicted RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 CACTIN-AS1Q8N1I8 211 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 CDHR5Q9HBB8 845 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 NRBP1Q9UHY1 535 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 PRG4Q92954 1404 aaPredicted RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 EPB41L2O43491 1005 aaKnown RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 LDLRAD1Q5T700 205 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 PHOX2BQ99453 314 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 RRP7BPQ9NSQ0 103 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 COLQQ9Y215 455 aaPredicted RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 C9orf84Q5VXU9 1444 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 CCDC141Q6ZP82 1450 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 TBX4P57082 545 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 PDIA6Q15084 440 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 PLEKHG6Q3KR16 790 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 TRIM52Q96A61 297 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 IQGAP1P46940 1657 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 FAM135AQ9P2D6 1515 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 USP47Q96K76 1375 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 DEPDC5O75140 1603 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 CCDC96Q2M329 555 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 KIF15Q9NS87 1388 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 CFAP69A5D8W1 941 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 HNRNPUQ00839 825 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PIK3R5Q8WYR1 880 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PARD3Q8TEW0 1356 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PLB1Q6P1J6 1458 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 BLMP54132 1417 aaPredicted RBP5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PHF14O94880 888 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 FBXO33Q7Z6M2 555 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 JAZF1Q86VZ6 243 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 G3BP2Q9UN86 482 aaKnown RBP5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 COL17A1Q9UMD9 1497 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 ERCC5P28715 1186 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 HDLBPQ00341 1268 aaKnown RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 HELBQ8NG08 1087 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 IRF2BPLQ9H1B7 796 aa5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 CUEDC1Q9NWM3 386 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 NUDCQ9Y266 331 aa5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 NOP58Q9Y2X3 529 aaKnown RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 ERCC6Q03468 1493 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 CCDC189A1A4V9 331 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ZNF500O60304 480 aaPredicted RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 PDE6BP35913 854 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 TINF2Q9BSI4 451 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 CEP152O94986 1710 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ATP1B4Q9UN42 357 aaPredicted RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 DUOX2Q9NRD8 1548 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 OSBPP22059 807 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 PDE3BQ13370 1112 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 TSNAXIP1Q2TAA8 658 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 DMGDHQ9UI17 866 aaKnown RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 IQSEC3Q9UPP2 1182 aaPredicted RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 TBC1D2BQ9UPU7 963 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ERBINQ96RT1 1412 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 VWDEQ8N2E2 1590 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 UHRF1BP1LA0JNW5 1464 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 HDGFL1Q5TGJ6 251 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ILDR1Q86SU0 546 aaPredicted RBP5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 QTRT2Q9H974 415 aaKnown RBP5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ARHGEF10LQ9HCE6 1279 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 SLAIN2Q9P270 581 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 PLA2R1Q13018 1463 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 WDR7Q9Y4E6 1490 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ERBB3P21860 1342 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ABL2P42684 1182 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 SLC39A13Q96H72 371 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 PPP1R12CQ9BZL4 782 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 POLR3EQ9NVU0 708 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 STAC3Q96MF2 364 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 TANGO6Q9C0B7 1094 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 RPGRIP1LQ68CZ1 1315 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 MYO3AQ8NEV4 1616 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 MADDQ8WXG6 1647 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 HOXA2O43364 376 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 WDHD1O75717 1129 aaPredicted RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 BMS1Q14692 1282 aaKnown RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 COMMD10Q9Y6G5 202 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 SYNMO15061 1565 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 SCAPERQ9BY12 1400 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms