RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 PLPP6Q8IY26 295 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 DHX38Q92620 1227 aaKnown RBP5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 MYO5CQ9NQX4 1742 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 BRD4O60885 1362 aaPredicted RBP5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 SAMD9LQ8IVG5 1584 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 IGBP1P78318 339 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 C9orf131Q5VYM1 1079 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 ARAP3Q8WWN8 1544 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 ANKRD50Q9ULJ7 1429 aa5.68□□□□□ -1.5
CLCA3P-202ENST00000466454 CLASP1Q7Z460 1538 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 ATP10BO94823 1461 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 PLEKHH2Q8IVE3 1493 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 RAD51AP2Q09MP3 1159 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 TTLL12Q14166 644 aaPredicted RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 CACTIN-AS1Q8N1I8 211 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 CDHR5Q9HBB8 845 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 NRBP1Q9UHY1 535 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 PRG4Q92954 1404 aaPredicted RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 EPB41L2O43491 1005 aaKnown RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 LDLRAD1Q5T700 205 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 PHOX2BQ99453 314 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 RRP7BPQ9NSQ0 103 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 COLQQ9Y215 455 aaPredicted RBP5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 C9orf84Q5VXU9 1444 aa5.67□□□□□ -1.5
CLCA3P-202ENST00000466454 CCDC141Q6ZP82 1450 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 TBX4P57082 545 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 PDIA6Q15084 440 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 PLEKHG6Q3KR16 790 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 TRIM52Q96A61 297 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 IQGAP1P46940 1657 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 FAM135AQ9P2D6 1515 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 USP47Q96K76 1375 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 DEPDC5O75140 1603 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 CCDC96Q2M329 555 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 KIF15Q9NS87 1388 aa5.66□□□□□ -1.5
CLCA3P-202ENST00000466454 CFAP69A5D8W1 941 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 HNRNPUQ00839 825 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PIK3R5Q8WYR1 880 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PARD3Q8TEW0 1356 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PLB1Q6P1J6 1458 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 BLMP54132 1417 aaPredicted RBP5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PHF14O94880 888 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 FBXO33Q7Z6M2 555 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 JAZF1Q86VZ6 243 aa5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 G3BP2Q9UN86 482 aaKnown RBP5.65□□□□□ -1.5
CLCA3P-202ENST00000466454 PRAG1Q86YV5 1406 aa5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 COL17A1Q9UMD9 1497 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 ERCC5P28715 1186 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 HDLBPQ00341 1268 aaKnown RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 HELBQ8NG08 1087 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 IRF2BPLQ9H1B7 796 aa5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 CUEDC1Q9NWM3 386 aaPredicted RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 NUDCQ9Y266 331 aa5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 NOP58Q9Y2X3 529 aaKnown RBP5.65□□□□□ -1.51
CLCA3P-202ENST00000466454 ERCC6Q03468 1493 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 CCDC189A1A4V9 331 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ZNF500O60304 480 aaPredicted RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 PDE6BP35913 854 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 TINF2Q9BSI4 451 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 CEP152O94986 1710 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 SPHKAPQ2M3C7 1700 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ATP1B4Q9UN42 357 aaPredicted RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 DUOX2Q9NRD8 1548 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 OSBPP22059 807 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 PDE3BQ13370 1112 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 TSNAXIP1Q2TAA8 658 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 DMGDHQ9UI17 866 aaKnown RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 IQSEC3Q9UPP2 1182 aaPredicted RBP5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 TBC1D2BQ9UPU7 963 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 ERBINQ96RT1 1412 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 VWDEQ8N2E2 1590 aa5.64□□□□□ -1.51
CLCA3P-202ENST00000466454 UHRF1BP1LA0JNW5 1464 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 HDGFL1Q5TGJ6 251 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ILDR1Q86SU0 546 aaPredicted RBP5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 QTRT2Q9H974 415 aaKnown RBP5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ARHGEF10LQ9HCE6 1279 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 SLAIN2Q9P270 581 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 PLA2R1Q13018 1463 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 WDR7Q9Y4E6 1490 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ERBB3P21860 1342 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 ABL2P42684 1182 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 SLC39A13Q96H72 371 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 PPP1R12CQ9BZL4 782 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 POLR3EQ9NVU0 708 aa5.63□□□□□ -1.51
CLCA3P-202ENST00000466454 STAC3Q96MF2 364 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 TANGO6Q9C0B7 1094 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 RPGRIP1LQ68CZ1 1315 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 MYO3AQ8NEV4 1616 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 MADDQ8WXG6 1647 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 HOXA2O43364 376 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 WDHD1O75717 1129 aaPredicted RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 BMS1Q14692 1282 aaKnown RBP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 COMMD10Q9Y6G5 202 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 SYNMO15061 1565 aa5.62□□□□□ -1.51
CLCA3P-202ENST00000466454 SCAPERQ9BY12 1400 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms