RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 PDIA4P13667 645 aaKnown RBP10.79□□□□□ -0.68
SPTA1-203ENST00000465741 MAP7D1Q3KQU3 841 aa10.79□□□□□ -0.68
SPTA1-203ENST00000465741 CCDC125Q86Z20 511 aa10.79□□□□□ -0.68
SPTA1-203ENST00000465741 PLEKHM2Q8IWE5 1019 aa10.79□□□□□ -0.68
SPTA1-203ENST00000465741 FAM174AQ8TBP5 190 aa10.79□□□□□ -0.68
SPTA1-203ENST00000465741 SYNJ1O43426 1573 aa10.78□□□□□ -0.68
SPTA1-203ENST00000465741 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
SPTA1-203ENST00000465741 LOC105371045A0A1W2PR82 267 aa10.78□□□□□ -0.68
SPTA1-203ENST00000465741 USP17L5A8MUK1 530 aa10.78□□□□□ -0.68
SPTA1-203ENST00000465741 HPS1Q92902 700 aa10.78□□□□□ -0.68
SPTA1-203ENST00000465741 TRIM47Q96LD4 638 aa10.78□□□□□ -0.68
SPTA1-203ENST00000465741 URB2Q14146 1524 aaKnown RBP10.78□□□□□ -0.68
SPTA1-203ENST00000465741 SOGA1O94964 1423 aa10.77□□□□□ -0.68
SPTA1-203ENST00000465741 USP17L3A6NCW0 530 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 USP17L4A6NCW7 530 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 TERTO14746 1132 aaKnown RBP10.77□□□□□ -0.69
SPTA1-203ENST00000465741 USP17L2Q6R6M4 530 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 USP17L1Q7RTZ2 530 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 PHTF2Q8N3S3 785 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 PLPP7Q8NBV4 271 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 VRTNQ9H8Y1 702 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 TOPBP1Q92547 1522 aa10.77□□□□□ -0.69
SPTA1-203ENST00000465741 MRC2Q9UBG0 1479 aa10.76□□□□□ -0.69
SPTA1-203ENST00000465741 SEPT12Q8IYM1 358 aa10.76□□□□□ -0.69
SPTA1-203ENST00000465741 EHBP1Q8NDI1 1231 aa10.76□□□□□ -0.69
SPTA1-203ENST00000465741 SRPK2P78362 688 aaKnown RBP10.75□□□□□ -0.69
SPTA1-203ENST00000465741 SKOR1P84550 965 aa10.75□□□□□ -0.69
SPTA1-203ENST00000465741 RETREG2Q8NC44 543 aa10.75□□□□□ -0.69
SPTA1-203ENST00000465741 MAP4K5Q9Y4K4 846 aa10.75□□□□□ -0.69
SPTA1-203ENST00000465741 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
SPTA1-203ENST00000465741 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
SPTA1-203ENST00000465741 EML3Q32P44 896 aa10.74□□□□□ -0.69
SPTA1-203ENST00000465741 CHIC2Q9UKJ5 165 aa10.74□□□□□ -0.69
SPTA1-203ENST00000465741 DOLKQ9UPQ8 538 aa10.74□□□□□ -0.69
SPTA1-203ENST00000465741 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
SPTA1-203ENST00000465741 TOP2BQ02880 1626 aa10.73□□□□□ -0.69
SPTA1-203ENST00000465741 ATG7O95352 703 aa10.73□□□□□ -0.69
SPTA1-203ENST00000465741 INSM1Q01101 510 aaPredicted RBP10.73□□□□□ -0.69
SPTA1-203ENST00000465741 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
SPTA1-203ENST00000465741 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
SPTA1-203ENST00000465741 RAD54L2Q9Y4B4 1467 aa10.73□□□□□ -0.69
SPTA1-203ENST00000465741 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
SPTA1-203ENST00000465741 ESPNB1AK53 854 aa10.72□□□□□ -0.69
SPTA1-203ENST00000465741 ATP5J2-PTCD1G3V325 749 aa10.72□□□□□ -0.69
SPTA1-203ENST00000465741 NCOA4Q13772 614 aa10.72□□□□□ -0.69
SPTA1-203ENST00000465741 VASH1Q7L8A9 365 aaPredicted RBP10.72□□□□□ -0.69
SPTA1-203ENST00000465741 USTQ9Y2C2 406 aa10.72□□□□□ -0.69
SPTA1-203ENST00000465741 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
SPTA1-203ENST00000465741 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.69
SPTA1-203ENST00000465741 DEPDC4Q8N2C3 294 aa10.71□□□□□ -0.69
SPTA1-203ENST00000465741 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
SPTA1-203ENST00000465741 KCTD15Q96SI1 283 aaPredicted RBP10.71□□□□□ -0.69
SPTA1-203ENST00000465741 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
SPTA1-203ENST00000465741 POLA1P09884 1462 aaPredicted RBP10.7□□□□□ -0.7
SPTA1-203ENST00000465741 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
SPTA1-203ENST00000465741 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
SPTA1-203ENST00000465741 TRIM50Q86XT4 487 aa10.7□□□□□ -0.7
SPTA1-203ENST00000465741 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
SPTA1-203ENST00000465741 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
SPTA1-203ENST00000465741 LARP1Q6PKG0 1096 aaKnown RBP10.69□□□□□ -0.7
SPTA1-203ENST00000465741 MPNDQ8N594 471 aa10.69□□□□□ -0.7
SPTA1-203ENST00000465741 NOD1Q9Y239 953 aa10.69□□□□□ -0.7
SPTA1-203ENST00000465741 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
SPTA1-203ENST00000465741 FAM196BA6NMK8 535 aa10.68□□□□□ -0.7
SPTA1-203ENST00000465741 ATP1A2P50993 1020 aa10.68□□□□□ -0.7
SPTA1-203ENST00000465741 ELOAQ14241 798 aaKnown RBP10.68□□□□□ -0.7
SPTA1-203ENST00000465741 ARID5BQ14865 1188 aa10.68□□□□□ -0.7
SPTA1-203ENST00000465741 OXLD1Q5BKU9 147 aa10.68□□□□□ -0.7
SPTA1-203ENST00000465741 CCDC85AQ96PX6 553 aaPredicted RBP10.68□□□□□ -0.7
SPTA1-203ENST00000465741 CDK15Q96Q40 435 aa10.68□□□□□ -0.7
SPTA1-203ENST00000465741 IGF1RP08069 1367 aa10.67□□□□□ -0.7
SPTA1-203ENST00000465741 LORP23490 312 aaPredicted RBP10.67□□□□□ -0.7
SPTA1-203ENST00000465741 PCDHB11Q9Y5F2 797 aa10.67□□□□□ -0.7
SPTA1-203ENST00000465741 EEA1Q15075 1411 aa10.67□□□□□ -0.7
SPTA1-203ENST00000465741 BIVM-ERCC5R4GMW8 1640 aa10.66□□□□□ -0.7
SPTA1-203ENST00000465741 RASA1P20936 1047 aa10.66□□□□□ -0.7
SPTA1-203ENST00000465741 DHX9Q08211 1270 aaKnown RBP10.66□□□□□ -0.7
SPTA1-203ENST00000465741 USP4Q13107 963 aa10.66□□□□□ -0.7
SPTA1-203ENST00000465741 WDR62O43379 1518 aa10.66□□□□□ -0.7
SPTA1-203ENST00000465741 PRDM2Q13029 1718 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L15C9J2P7 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L10C9JJH3 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L13C9JLJ4 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L12C9JPN9 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L11C9JVI0 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L21D6R901 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L18D6R9N7 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L22D6RA61 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L17D6RBQ6 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L19D6RCP7 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L20D6RJB6 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 RAB15P59190 212 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 USP17L24Q0WX57 530 aa10.65□□□□□ -0.7
SPTA1-203ENST00000465741 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
SPTA1-203ENST00000465741 FSHRP23945 695 aa10.64□□□□□ -0.71
SPTA1-203ENST00000465741 TSGA10IPQ3SY00 556 aa10.64□□□□□ -0.71
SPTA1-203ENST00000465741 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
SPTA1-203ENST00000465741 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
SPTA1-203ENST00000465741 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
SPTA1-203ENST00000465741 SIAH2O43255 324 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms