RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 HELBQ8NG08 1087 aaPredicted RBP8.38□□□□□ -1.07
SGCE-209ENST00000462731 RNF34Q969K3 372 aa8.38□□□□□ -1.07
SGCE-209ENST00000462731 IRF2BPLQ9H1B7 796 aa8.38□□□□□ -1.07
SGCE-209ENST00000462731 LAS1LQ9Y4W2 734 aaKnown RBP8.38□□□□□ -1.07
SGCE-209ENST00000462731 C21orf2O43822 256 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 ABL1P00519 1130 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 FGD1P98174 961 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 FANCCQ00597 558 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 PLEKHG6Q3KR16 790 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 PADI6Q6TGC4 694 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 CERKQ8TCT0 537 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 SGSM3Q96HU1 749 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 PCDH12Q9NPG4 1184 aa8.37□□□□□ -1.07
SGCE-209ENST00000462731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
SGCE-209ENST00000462731 PIK3CDO00329 1044 aa8.36□□□□□ -1.07
SGCE-209ENST00000462731 PPFIA4O75335 1185 aa8.36□□□□□ -1.07
SGCE-209ENST00000462731 ITGBL1O95965 494 aaPredicted RBP8.36□□□□□ -1.07
SGCE-209ENST00000462731 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
SGCE-209ENST00000462731 WNT2BQ93097 391 aa8.36□□□□□ -1.07
SGCE-209ENST00000462731 KCNH8Q96L42 1107 aa8.36□□□□□ -1.07
SGCE-209ENST00000462731 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 DNAJA1P31689 397 aaKnown RBP8.35□□□□□ -1.07
SGCE-209ENST00000462731 SCNN1AP37088 669 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 ZNF211Q13398 564 aaPredicted RBP8.35□□□□□ -1.07
SGCE-209ENST00000462731 PPP1R18Q6NYC8 613 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 TAS1R3Q7RTX0 852 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 LRRN4Q8WUT4 740 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 KCNK17Q96T54 332 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
SGCE-209ENST00000462731 MKRN1Q9UHC7 482 aaKnown RBP8.35□□□□□ -1.07
SGCE-209ENST00000462731 DMGDHQ9UI17 866 aaKnown RBP8.35□□□□□ -1.07
SGCE-209ENST00000462731 BHMG1C9JSJ3 638 aaPredicted RBP8.34□□□□□ -1.07
SGCE-209ENST00000462731 ATP5J2-PTCD1G3V325 749 aa8.34□□□□□ -1.07
SGCE-209ENST00000462731 P4HBP07237 508 aaKnown RBP8.34□□□□□ -1.07
SGCE-209ENST00000462731 SKIP12755 728 aa8.34□□□□□ -1.07
SGCE-209ENST00000462731 RASA1P20936 1047 aa8.34□□□□□ -1.07
SGCE-209ENST00000462731 CCDC146Q8IYE0 955 aa8.34□□□□□ -1.07
SGCE-209ENST00000462731 TTC13Q8NBP0 860 aa8.34□□□□□ -1.07
SGCE-209ENST00000462731 ACBD3Q9H3P7 528 aa8.34□□□□□ -1.07
SGCE-209ENST00000462731 ANO8Q9HCE9 1232 aaPredicted RBP8.34□□□□□ -1.07
SGCE-209ENST00000462731 ARID5AQ03989 594 aa8.33□□□□□ -1.08
SGCE-209ENST00000462731 FAM50AQ14320 339 aaKnown RBP8.33□□□□□ -1.08
SGCE-209ENST00000462731 NFE2L2Q16236 605 aa8.33□□□□□ -1.08
SGCE-209ENST00000462731 LONRF3Q496Y0 759 aa8.33□□□□□ -1.08
SGCE-209ENST00000462731 TMTC2Q8N394 836 aa8.33□□□□□ -1.08
SGCE-209ENST00000462731 NME8Q8N427 588 aa8.33□□□□□ -1.08
SGCE-209ENST00000462731 ENPP3O14638 875 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 S100BP04271 92 aaPredicted RBP8.32□□□□□ -1.08
SGCE-209ENST00000462731 APLP1P51693 650 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 ECM1Q16610 540 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 FILIP1Q7Z7B0 1213 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 PPARGC1BQ86YN6 1023 aaKnown RBP8.32□□□□□ -1.08
SGCE-209ENST00000462731 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
SGCE-209ENST00000462731 EPS8L1Q8TE68 723 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 RBM33Q96EV2 1170 aaKnown RBP8.32□□□□□ -1.08
SGCE-209ENST00000462731 MRS2Q9HD23 443 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 IFT57Q9NWB7 429 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 GABBR1Q9UBS5 961 aa8.32□□□□□ -1.08
SGCE-209ENST00000462731 MRPL42Q9Y6G3 142 aaKnown RBP8.32□□□□□ -1.08
SGCE-209ENST00000462731 XRCC5P13010 732 aaKnown RBP8.31□□□□□ -1.08
SGCE-209ENST00000462731 ZNF76P36508 570 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 XPCQ01831 940 aaPredicted RBP8.31□□□□□ -1.08
SGCE-209ENST00000462731 NR1H3Q13133 447 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 BMS1Q14692 1282 aaKnown RBP8.31□□□□□ -1.08
SGCE-209ENST00000462731 C4orf46Q504U0 113 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 GPATCH11Q8N954 259 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 EVI5LQ96CN4 794 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 SLC4A5Q9BY07 1137 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 PCGF6Q9BYE7 350 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 TMX1Q9H3N1 280 aa8.31□□□□□ -1.08
SGCE-209ENST00000462731 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.31□□□□□ -1.08
SGCE-209ENST00000462731 DNAJC6O75061 913 aa8.3□□□□□ -1.08
SGCE-209ENST00000462731 TBX4P57082 545 aa8.3□□□□□ -1.08
SGCE-209ENST00000462731 SF3B2Q13435 895 aaKnown RBP8.3□□□□□ -1.08
SGCE-209ENST00000462731 TSHZ1Q6ZSZ6 1077 aa8.3□□□□□ -1.08
SGCE-209ENST00000462731 CCDC136Q96JN2 1154 aa8.3□□□□□ -1.08
SGCE-209ENST00000462731 ANO2Q9NQ90 1003 aa8.3□□□□□ -1.08
SGCE-209ENST00000462731 PRDM10Q9NQV6 1147 aa8.3□□□□□ -1.08
SGCE-209ENST00000462731 DDX56Q9NY93 547 aaKnown RBP8.3□□□□□ -1.08
SGCE-209ENST00000462731 CXXC1Q9P0U4 656 aaPredicted RBP8.3□□□□□ -1.08
SGCE-209ENST00000462731 HOXA2O43364 376 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 SH3BP5O60239 455 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 TNNI2P48788 182 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 USP46P62068 366 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 DPYDQ12882 1025 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 TMC4Q7Z404 712 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 DEPDC4Q8N2C3 294 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 MRFAP1L1Q96HT8 127 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 MAF1Q9H063 256 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 SPC25Q9HBM1 224 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 GEMIN8Q9NWZ8 242 aaKnown RBP8.29□□□□□ -1.08
SGCE-209ENST00000462731 PRKAB1Q9Y478 270 aa8.29□□□□□ -1.08
SGCE-209ENST00000462731 SORBS3O60504 671 aa8.28□□□□□ -1.08
SGCE-209ENST00000462731 STK10O94804 968 aaKnown RBP8.28□□□□□ -1.08
SGCE-209ENST00000462731 FDX1P10109 184 aa8.28□□□□□ -1.08
SGCE-209ENST00000462731 FKBP4Q02790 459 aaKnown RBP eCLIP8.28□□□□□ -1.08
SGCE-209ENST00000462731 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.08
SGCE-209ENST00000462731 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms