RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 AEBP2Q6ZN18 517 aaPredicted RBP21.72■■□□□ 1.07
SGCE-209ENST00000462731 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
SGCE-209ENST00000462731 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
SGCE-209ENST00000462731 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
SGCE-209ENST00000462731 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
SGCE-209ENST00000462731 FOXD1Q16676 465 aa17.52■□□□□ 0.4
SGCE-209ENST00000462731 MSH5O43196 834 aa16.73■□□□□ 0.27
SGCE-209ENST00000462731 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
SGCE-209ENST00000462731 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
SGCE-209ENST00000462731 ADRA2BP18089 450 aa15.58■□□□□ 0.08
SGCE-209ENST00000462731 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
SGCE-209ENST00000462731 CACNB1Q02641 598 aaPredicted RBP14.92□□□□□ -0.02
SGCE-209ENST00000462731 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
SGCE-209ENST00000462731 MAPK8IP2Q13387 824 aaPredicted RBP14.6□□□□□ -0.07
SGCE-209ENST00000462731 SCAF1Q9H7N4 1312 aaKnown RBP14.26□□□□□ -0.13
SGCE-209ENST00000462731 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
SGCE-209ENST00000462731 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
SGCE-209ENST00000462731 SLC24A1O60721 1099 aa14□□□□□ -0.17
SGCE-209ENST00000462731 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
SGCE-209ENST00000462731 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
SGCE-209ENST00000462731 POTEHQ6S545 545 aa13.83□□□□□ -0.2
SGCE-209ENST00000462731 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
SGCE-209ENST00000462731 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
SGCE-209ENST00000462731 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
SGCE-209ENST00000462731 PPP4R3CPQ6ZMV5 832 aa13.36□□□□□ -0.27
SGCE-209ENST00000462731 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
SGCE-209ENST00000462731 KCNA4P22459 653 aa13.18□□□□□ -0.3
SGCE-209ENST00000462731 CSRNP3Q8WYN3 585 aa13.13□□□□□ -0.31
SGCE-209ENST00000462731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.31
SGCE-209ENST00000462731 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
SGCE-209ENST00000462731 RTN4Q9NQC3 1192 aaKnown RBP13.02□□□□□ -0.33
SGCE-209ENST00000462731 DSG3P32926 999 aa13□□□□□ -0.33
SGCE-209ENST00000462731 CAPN15O75808 1086 aa12.85□□□□□ -0.35
SGCE-209ENST00000462731 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
SGCE-209ENST00000462731 SLC4A1APQ9BWU0 796 aaKnown RBP12.79□□□□□ -0.36
SGCE-209ENST00000462731 U3KPZ7 1027 aaPredicted RBP12.74□□□□□ -0.37
SGCE-209ENST00000462731 NCBP3Q53F19 620 aaKnown RBP12.6□□□□□ -0.39
SGCE-209ENST00000462731 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
SGCE-209ENST00000462731 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
SGCE-209ENST00000462731 ABCB7O75027 752 aa12.47□□□□□ -0.41
SGCE-209ENST00000462731 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
SGCE-209ENST00000462731 RBM42Q9BTD8 480 aaKnown RBP12.41□□□□□ -0.42
SGCE-209ENST00000462731 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
SGCE-209ENST00000462731 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
SGCE-209ENST00000462731 APLP2Q06481 763 aa12.28□□□□□ -0.44
SGCE-209ENST00000462731 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
SGCE-209ENST00000462731 ZBTB22O15209 634 aa12.16□□□□□ -0.46
SGCE-209ENST00000462731 SLC4A2P04920 1241 aa12.07□□□□□ -0.48
SGCE-209ENST00000462731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
SGCE-209ENST00000462731 HAX1O00165 279 aa12.06□□□□□ -0.48
SGCE-209ENST00000462731 HNRNPUL2Q1KMD3 747 aaKnown RBP12.06□□□□□ -0.48
SGCE-209ENST00000462731 PRKCSHP14314 528 aaPredicted RBP12.03□□□□□ -0.48
SGCE-209ENST00000462731 BCANQ96GW7 911 aa12.02□□□□□ -0.49
SGCE-209ENST00000462731 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
SGCE-209ENST00000462731 TAOK2Q9UL54 1235 aa11.96□□□□□ -0.49
SGCE-209ENST00000462731 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
SGCE-209ENST00000462731 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
SGCE-209ENST00000462731 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
SGCE-209ENST00000462731 ARXQ96QS3 562 aa11.93□□□□□ -0.5
SGCE-209ENST00000462731 POLA2Q14181 598 aa11.9□□□□□ -0.5
SGCE-209ENST00000462731 EVX2Q03828 476 aa11.84□□□□□ -0.51
SGCE-209ENST00000462731 REM2Q8IYK8 340 aaPredicted RBP11.83□□□□□ -0.52
SGCE-209ENST00000462731 FXR2P51116 673 aaKnown RBP eCLIP11.81□□□□□ -0.52
SGCE-209ENST00000462731 FOXD4L1Q9NU39 408 aa11.8□□□□□ -0.52
SGCE-209ENST00000462731 FKBP8Q14318 412 aa11.78□□□□□ -0.52
SGCE-209ENST00000462731 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
SGCE-209ENST00000462731 LHX8Q68G74 356 aa11.76□□□□□ -0.53
SGCE-209ENST00000462731 TIMELESSQ9UNS1 1208 aa11.73□□□□□ -0.53
SGCE-209ENST00000462731 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
SGCE-209ENST00000462731 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
SGCE-209ENST00000462731 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
SGCE-209ENST00000462731 VSIG10Q8N0Z9 540 aa11.63□□□□□ -0.55
SGCE-209ENST00000462731 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
SGCE-209ENST00000462731 ERICH6Q7L0X2 663 aa11.6□□□□□ -0.55
SGCE-209ENST00000462731 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
SGCE-209ENST00000462731 HOMEZQ8IX15 550 aa11.55□□□□□ -0.56
SGCE-209ENST00000462731 OSCARQ8IYS5 282 aa11.53□□□□□ -0.56
SGCE-209ENST00000462731 GABBR2O75899 941 aa11.52□□□□□ -0.57
SGCE-209ENST00000462731 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
SGCE-209ENST00000462731 C19orf67A6NJJ6 358 aa11.45□□□□□ -0.58
SGCE-209ENST00000462731 GTF3C3Q9Y5Q9 886 aa11.44□□□□□ -0.58
SGCE-209ENST00000462731 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
SGCE-209ENST00000462731 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
SGCE-209ENST00000462731 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
SGCE-209ENST00000462731 ATF5Q9Y2D1 282 aaPredicted RBP11.29□□□□□ -0.6
SGCE-209ENST00000462731 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
SGCE-209ENST00000462731 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
SGCE-209ENST00000462731 CLEC11AQ9Y240 323 aa11.22□□□□□ -0.61
SGCE-209ENST00000462731 DCAF8L2P0C7V8 631 aa11.21□□□□□ -0.61
SGCE-209ENST00000462731 TMEM132AQ24JP5 1023 aa11.21□□□□□ -0.61
SGCE-209ENST00000462731 SPDYE1Q8NFV5 336 aaPredicted RBP11.17□□□□□ -0.62
SGCE-209ENST00000462731 FBLN2P98095 1184 aa11.15□□□□□ -0.62
SGCE-209ENST00000462731 SPDYE2BA6NHP3 402 aa11.14□□□□□ -0.63
SGCE-209ENST00000462731 SPDYE6P0CI01 402 aa11.14□□□□□ -0.63
SGCE-209ENST00000462731 SPDYE2Q495Y8 402 aa11.14□□□□□ -0.63
SGCE-209ENST00000462731 POTEMA6NI47 508 aa11.12□□□□□ -0.63
SGCE-209ENST00000462731 C14orf37Q86TY3 774 aa11.11□□□□□ -0.63
SGCE-209ENST00000462731 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
SGCE-209ENST00000462731 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
SGCE-209ENST00000462731 PODXL2Q9NZ53 605 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms