RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 EPB41L2O43491 1005 aaKnown RBP15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 ME1P48163 572 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 MTHFSP49914 203 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 C16orf45Q96MC5 204 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 PRAM1Q96QH2 718 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 SLC12A5Q9H2X9 1139 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 BIVM-ERCC5R4GMW8 1640 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 HMOX1P09601 288 aa15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 GBP2P32456 591 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA3-201ENST00000253812 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
PCDHGA3-201ENST00000253812 DHX16O60231 1041 aaKnown RBP15.47■□□□□ 0.07
PCDHGA3-201ENST00000253812 TXLNAP40222 546 aa15.47■□□□□ 0.07
PCDHGA3-201ENST00000253812 GNAI1P63096 354 aa15.47■□□□□ 0.07
PCDHGA3-201ENST00000253812 KIAA1328Q86T90 577 aa15.47■□□□□ 0.07
PCDHGA3-201ENST00000253812 ANKRD62A6NC57 917 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 SLC52A1Q9NWF4 448 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 CFAP45Q9UL16 551 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 TEFQ10587 303 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 NUTM2GQ5VZR2 741 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 LARP1BQ659C4 914 aaKnown RBP15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 SPATA32Q96LK8 384 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 ABCC5O15440 1437 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 ANKRD1Q15327 319 aa15.46■□□□□ 0.07
PCDHGA3-201ENST00000253812 CEBPZQ03701 1054 aaKnown RBP15.45■□□□□ 0.06
PCDHGA3-201ENST00000253812 FKBP5Q13451 457 aaPredicted RBP15.45■□□□□ 0.06
PCDHGA3-201ENST00000253812 C1orf141Q5JVX7 400 aa15.45■□□□□ 0.06
PCDHGA3-201ENST00000253812 USP25Q9UHP3 1055 aa15.45■□□□□ 0.06
PCDHGA3-201ENST00000253812 KIF4BQ2VIQ3 1234 aa15.44■□□□□ 0.06
PCDHGA3-201ENST00000253812 CYP46A1Q9Y6A2 500 aa15.44■□□□□ 0.06
PCDHGA3-201ENST00000253812 KIF5CO60282 957 aa15.44■□□□□ 0.06
PCDHGA3-201ENST00000253812 CCDC91Q7Z6B0 441 aa15.44■□□□□ 0.06
PCDHGA3-201ENST00000253812 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
PCDHGA3-201ENST00000253812 RASSF4Q9H2L5 321 aa15.44■□□□□ 0.06
PCDHGA3-201ENST00000253812 CAMSAP2Q08AD1 1489 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 CCDC175P0C221 793 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 PPP2R1AP30153 589 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 HIP1O00291 1037 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 XRCC6P12956 609 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 CASQ1P31415 396 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
PCDHGA3-201ENST00000253812 NLRP6P59044 892 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 IMMTQ16891 758 aaKnown RBP15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 TTC31Q49AM3 519 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 FEZ1Q99689 392 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 CLIP2Q9UDT6 1046 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 STIM1Q13586 685 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 UVSSAQ2YD98 709 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 AMOTL1Q8IY63 956 aa15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.42■□□□□ 0.06
PCDHGA3-201ENST00000253812 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
PCDHGA3-201ENST00000253812 EIF2S2P20042 333 aaKnown RBP15.41■□□□□ 0.06
PCDHGA3-201ENST00000253812 GSDMDP57764 484 aa15.41■□□□□ 0.06
PCDHGA3-201ENST00000253812 NECTIN2Q92692 538 aa15.41■□□□□ 0.06
PCDHGA3-201ENST00000253812 ZSCAN31Q96LW9 406 aaPredicted RBP15.41■□□□□ 0.06
PCDHGA3-201ENST00000253812 EVA1CP58658 441 aa15.41■□□□□ 0.06
PCDHGA3-201ENST00000253812 SPATA24Q86W54 205 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 TAF4BQ92750 862 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 TNPO1Q92973 898 aaKnown RBP15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 CD109Q6YHK3 1445 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 ERBINQ96RT1 1412 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 KLHL40Q2TBA0 621 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 TCEAL9Q9UHQ7 104 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 PTPN23Q9H3S7 1636 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 GNAI3P08754 354 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 ATP2B1P20020 1258 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 HSPA4P34932 840 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 HS1BP3Q53T59 392 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 ANO10Q9NW15 660 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 ANKRD30BQ9BXX2 1392 aa15.4■□□□□ 0.06
PCDHGA3-201ENST00000253812 TCP11L2Q8N4U5 519 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 FSD1Q9BTV5 496 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 RSPH14Q9UHP6 348 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 ZKSCAN5Q9Y2L8 839 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 NOLC1Q14978 699 aaKnown RBP eCLIP15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 GOLGA6L9A6NEM1 432 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 DDX58O95786 925 aaKnown RBP15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 SPECC1LQ69YQ0 1117 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 TBC1D2Q9BYX2 928 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 ARFGAP3Q9NP61 516 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 ADCY5O95622 1261 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 SYCP1Q15431 976 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 CEP135Q66GS9 1140 aa15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 TRMT1Q9NXH9 659 aaKnown RBP15.39■□□□□ 0.05
PCDHGA3-201ENST00000253812 CABP1Q9NZU7 370 aa15.38■□□□□ 0.05
PCDHGA3-201ENST00000253812 NCOA1Q15788 1441 aa15.38■□□□□ 0.05
PCDHGA3-201ENST00000253812 ATF3P18847 181 aa15.38■□□□□ 0.05
PCDHGA3-201ENST00000253812 UBTFL1P0CB47 393 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 CCDC184Q52MB2 194 aa15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 CDK19Q9BWU1 502 aa15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 CPSF2Q9P2I0 782 aaKnown RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 SNW1Q13573 536 aaKnown RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 CCDC43Q96MW1 224 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms