RNA–Protein interactions for RNA: ENSMUST00000211005.1

Nup98-204, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 3,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-204ENSMUST00000211005 Pak3Q61036 559 aa12.2□□□□□ -0.46
Nup98-204ENSMUST00000211005 Sos1Q62245 1319 aa12.2□□□□□ -0.46
Nup98-204ENSMUST00000211005 Akap11E9Q777 1895 aa12.2□□□□□ -0.46
Nup98-204ENSMUST00000211005 Plekhd1B2RPU2 505 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Adgrb1Q3UHD1 1582 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Fam50bQ9WTJ8 334 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Vamp4O70480 141 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Nkx2-3P97334 362 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Zpr1Q62384 459 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Ccdc60Q8C4J0 545 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Slc5a4bQ91ZP4 660 aa12.19□□□□□ -0.46
Nup98-204ENSMUST00000211005 Tns2Q8CGB6 1400 aa12.18□□□□□ -0.46
Nup98-204ENSMUST00000211005 Ccdc171E9Q1U1 1324 aa12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 Abcc12Q80WJ6 1366 aa12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 Gm6268A2A3U9 297 aa12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 SafbD3YXK2 937 aaKnown RBP12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 Kcnh8P59111 1102 aa12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 Pibf1E9Q6K3 756 aa12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 Cc2d1aQ8K1A6 943 aa12.17□□□□□ -0.46
Nup98-204ENSMUST00000211005 Pdzd9Q9D9M4 266 aa12.16□□□□□ -0.46
Nup98-204ENSMUST00000211005 1700019A02RikA0A087WPV9 146 aa12.16□□□□□ -0.46
Nup98-204ENSMUST00000211005 Rangap1P46061 589 aaKnown RBP12.15□□□□□ -0.46
Nup98-204ENSMUST00000211005 G3bp1P97855 465 aaKnown RBP12.15□□□□□ -0.46
Nup98-204ENSMUST00000211005 Dlg5E9Q9R9 1921 aa12.15□□□□□ -0.46
Nup98-204ENSMUST00000211005 4930572O03RikQ8C5Y0 211 aa12.15□□□□□ -0.46
Nup98-204ENSMUST00000211005 Pank1Q8K4K6 548 aa12.15□□□□□ -0.46
Nup98-204ENSMUST00000211005 KarsQ99MN1 595 aaKnown RBP12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Phkg2Q9DB30 406 aa12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Foxp4Q9DBY0 795 aaKnown RBP12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Kat6bQ8BRB7 1872 aa12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Ubr2Q6WKZ8 1755 aa12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Ggt6Q6PDE7 497 aa12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Nsd3Q6P2L6 1439 aa12.14□□□□□ -0.47
Nup98-204ENSMUST00000211005 Plekhm2Q80TQ5 1018 aa12.13□□□□□ -0.47
Nup98-204ENSMUST00000211005 Trim58Q5NCC9 485 aa12.13□□□□□ -0.47
Nup98-204ENSMUST00000211005 Larp1Q6ZQ58 1072 aaKnown RBP12.13□□□□□ -0.47
Nup98-204ENSMUST00000211005 Zeb2Q9R0G7 1215 aa12.13□□□□□ -0.47
Nup98-204ENSMUST00000211005 Igsf1Q7TQA1 1317 aa12.13□□□□□ -0.47
Nup98-204ENSMUST00000211005 Nectin2P32507 530 aa12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Speer4bQ9D9F7 267 aa12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Msh6P54276 1358 aaKnown RBP12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Fer1l6E0CZ42 1862 aa12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Cyp2d12Q8BVD2 504 aa12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Ppp1r3fQ9JIG4 799 aa12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Nhsl1Q8CAF4 1587 aa12.12□□□□□ -0.47
Nup98-204ENSMUST00000211005 Ccdc155Q80VJ8 648 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Tmco5bQ80X59 307 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Chmp7Q8R1T1 451 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Mast2Q60592 1734 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Btbd11Q6GQW0 1109 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Asic4Q7TNS7 539 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 NeflP08551 543 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Psrc1Q9D0P7 329 aa12.11□□□□□ -0.47
Nup98-204ENSMUST00000211005 Gm21680A0A0G2JGR8 267 aa12.1□□□□□ -0.47
Nup98-204ENSMUST00000211005 Tspyl2Q7TQI8 677 aa12.1□□□□□ -0.47
Nup98-204ENSMUST00000211005 Shank2Q80Z38 1476 aa12.1□□□□□ -0.47
Nup98-204ENSMUST00000211005 Chl1P70232 1209 aa12.1□□□□□ -0.47
Nup98-204ENSMUST00000211005 Eif3bQ8JZQ9 803 aaKnown RBP12.1□□□□□ -0.47
Nup98-204ENSMUST00000211005 Ccdc129Q14B48 1034 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Ssfa2Q922B9 1252 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Mbd3Q9Z2D8 285 aaKnown RBP12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Tnrc6cQ3UHC0 1690 aaKnown RBP12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Lrp6O88572 1613 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Cacna1sQ02789 1880 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Sema6bO54951 886 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Eif4a1P60843 406 aaKnown RBP12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Chpf2Q3UU43 768 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 PappaQ8R4K8 1624 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Cavin2Q63918 418 aaKnown RBP12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Nyap1Q6PFX7 833 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Znf330Q922H9 316 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Irx6Q9ER75 438 aa12.09□□□□□ -0.47
Nup98-204ENSMUST00000211005 Znf521Q6KAS7 1311 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Gm21663A0A0G2JE01 267 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Gm7361D3Z6R1 267 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 5031410I06RikE9Q4E0 267 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Gm1979E9QAN3 267 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Gm5862K7N5V5 267 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Gm10220K7N660 267 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Atf5O70191 283 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Q3TQI7 289 aaKnown RBP12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Q3UPC7 1272 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Tnnt1O88346 262 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Eno4Q8C042 619 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Prkrip1Q9CWV6 186 aaKnown RBP12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Cntnap1O54991 1385 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 MarsQ68FL6 902 aaKnown RBP12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Col1a2Q01149 1372 aa12.08□□□□□ -0.48
Nup98-204ENSMUST00000211005 Slc5a1Q8C3K6 665 aa12.07□□□□□ -0.48
Nup98-204ENSMUST00000211005 Aplp1Q03157 653 aa12.07□□□□□ -0.48
Nup98-204ENSMUST00000211005 Nutm1Q8BHP2 1126 aa12.07□□□□□ -0.48
Nup98-204ENSMUST00000211005 MypopQ8R4U1 393 aa12.07□□□□□ -0.48
Nup98-204ENSMUST00000211005 Nwd2Q6P5U7 1742 aa12.06□□□□□ -0.48
Nup98-204ENSMUST00000211005 Kcnh4A2A5F7 1018 aa12.06□□□□□ -0.48
Nup98-204ENSMUST00000211005 Maco1Q7TQE6 664 aaKnown RBP12.06□□□□□ -0.48
Nup98-204ENSMUST00000211005 Aldh1l1Q8R0Y6 902 aa12.06□□□□□ -0.48
Nup98-204ENSMUST00000211005 Tjp1P39447 1745 aaKnown RBP12.06□□□□□ -0.48
Nup98-204ENSMUST00000211005 BcorQ8CGN4 1759 aa12.06□□□□□ -0.48
Nup98-204ENSMUST00000211005 Aifm3Q3TY86 605 aa12.05□□□□□ -0.48
Nup98-204ENSMUST00000211005 Gm38655A0A286YDK6 273 aa12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms