RNA–Protein interactions for RNA: ENSMUST00000211005.1

Nup98-204, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 3,961 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-204ENSMUST00000211005 Gm35339A0A140LHH9 1649 aa20.14■□□□□ 0.82
Nup98-204ENSMUST00000211005 NischQ80TM9 1593 aa20.1■□□□□ 0.81
Nup98-204ENSMUST00000211005 Abcc9P70170 1546 aa19.5■□□□□ 0.71
Nup98-204ENSMUST00000211005 Abcc8B2RUS7 1588 aa19.27■□□□□ 0.68
Nup98-204ENSMUST00000211005 ScribQ80U72 1612 aa18.33■□□□□ 0.52
Nup98-204ENSMUST00000211005 Rhox8Q6VSS7 320 aa17.86■□□□□ 0.45
Nup98-204ENSMUST00000211005 Dcaf1Q80TR8 1506 aa17.85■□□□□ 0.45
Nup98-204ENSMUST00000211005 Kdm5dQ62240 1548 aa17.82■□□□□ 0.44
Nup98-204ENSMUST00000211005 NacadQ5SWP3 1504 aa17.74■□□□□ 0.43
Nup98-204ENSMUST00000211005 Rb1cc1Q9ESK9 1588 aa17.57■□□□□ 0.4
Nup98-204ENSMUST00000211005 Ccdc180J3QNE4 1664 aa17.4■□□□□ 0.38
Nup98-204ENSMUST00000211005 Sycp2Q9CUU3 1500 aa17.39■□□□□ 0.37
Nup98-204ENSMUST00000211005 Baz1aO88379 1555 aa17.34■□□□□ 0.37
Nup98-204ENSMUST00000211005 Crybg2B7ZCC2 1516 aa17.14■□□□□ 0.34
Nup98-204ENSMUST00000211005 Rtl1Q7M732 1744 aa17.13■□□□□ 0.33
Nup98-204ENSMUST00000211005 BicraF8VPZ9 1578 aa17.11■□□□□ 0.33
Nup98-204ENSMUST00000211005 Zcchc6Q5BLK4 1491 aaKnown RBP17■□□□□ 0.31
Nup98-204ENSMUST00000211005 Smarca2Q6DIC0 1577 aa16.9■□□□□ 0.3
Nup98-204ENSMUST00000211005 Cecr2E9Q2Z1 1453 aa16.66■□□□□ 0.26
Nup98-204ENSMUST00000211005 Ccdc136Q3TVA9 1136 aa16.65■□□□□ 0.26
Nup98-204ENSMUST00000211005 Smarca4Q3TKT4 1613 aaKnown RBP16.5■□□□□ 0.23
Nup98-204ENSMUST00000211005 Pds5bQ4VA53 1446 aaKnown RBP16.44■□□□□ 0.22
Nup98-204ENSMUST00000211005 Brd4Q9ESU6 1400 aaKnown RBP16.4■□□□□ 0.22
Nup98-204ENSMUST00000211005 Atad2bE9Q166 1460 aaKnown RBP16.4■□□□□ 0.22
Nup98-204ENSMUST00000211005 Synj1Q8CHC4 1574 aa16.39■□□□□ 0.22
Nup98-204ENSMUST00000211005 Iqgap2Q3UQ44 1575 aa16.35■□□□□ 0.21
Nup98-204ENSMUST00000211005 Trim41Q5NCC3 630 aa16.35■□□□□ 0.21
Nup98-204ENSMUST00000211005 CftrP26361 1476 aa16.34■□□□□ 0.21
Nup98-204ENSMUST00000211005 Cttnbp2B9EJA2 1648 aa16.32■□□□□ 0.2
Nup98-204ENSMUST00000211005 Thoc2B1AZI6 1594 aaKnown RBP16.16■□□□□ 0.18
Nup98-204ENSMUST00000211005 Wdr62Q3U3T8 1523 aa16.13■□□□□ 0.17
Nup98-204ENSMUST00000211005 Ercc6F8VPZ5 1481 aa16.12■□□□□ 0.17
Nup98-204ENSMUST00000211005 Frmpd1A2AKB4 1549 aa16.11■□□□□ 0.17
Nup98-204ENSMUST00000211005 Esf1Q3V1V3 845 aaKnown RBP16.06■□□□□ 0.16
Nup98-204ENSMUST00000211005 Golga3P55937 1487 aa16.04■□□□□ 0.16
Nup98-204ENSMUST00000211005 Top2bQ64511 1612 aa16■□□□□ 0.15
Nup98-204ENSMUST00000211005 Unc13aQ4KUS2 1712 aa15.99■□□□□ 0.15
Nup98-204ENSMUST00000211005 Cngb1E1AZ71 1325 aa15.98■□□□□ 0.15
Nup98-204ENSMUST00000211005 Cc2d2aQ8CFW7 1633 aa15.94■□□□□ 0.14
Nup98-204ENSMUST00000211005 HrcG5E8J6 738 aa15.9■□□□□ 0.14
Nup98-204ENSMUST00000211005 Fam135aQ6NS59 1506 aa15.88■□□□□ 0.13
Nup98-204ENSMUST00000211005 Dnajc5bQ9CQ94 199 aa15.88■□□□□ 0.13
Nup98-204ENSMUST00000211005 Phldb1Q6PDH0 1371 aaKnown RBP15.85■□□□□ 0.13
Nup98-204ENSMUST00000211005 Rsf1E9PWW9 1441 aaKnown RBP15.81■□□□□ 0.12
Nup98-204ENSMUST00000211005 Ccdc88bQ4QRL3 1481 aa15.79■□□□□ 0.12
Nup98-204ENSMUST00000211005 Fmn1Q05860 1466 aa15.75■□□□□ 0.11
Nup98-204ENSMUST00000211005 Lamc3Q9R0B6 1581 aa15.74■□□□□ 0.11
Nup98-204ENSMUST00000211005 TnnQ80Z71 1560 aa15.74■□□□□ 0.11
Nup98-204ENSMUST00000211005 Chic1Q8CBW7 227 aa15.74■□□□□ 0.11
Nup98-204ENSMUST00000211005 Cep164Q5DU05 1446 aa15.69■□□□□ 0.1
Nup98-204ENSMUST00000211005 Ubl4bQ9CQ84 188 aa15.69■□□□□ 0.1
Nup98-204ENSMUST00000211005 Kif15Q6P9L6 1387 aa15.68■□□□□ 0.1
Nup98-204ENSMUST00000211005 Baz1bQ9Z277 1479 aa15.6■□□□□ 0.09
Nup98-204ENSMUST00000211005 Top2aQ01320 1528 aaKnown RBP15.59■□□□□ 0.09
Nup98-204ENSMUST00000211005 Cux2P70298 1426 aa15.56■□□□□ 0.08
Nup98-204ENSMUST00000211005 Camsap1A2AHC3 1581 aa15.54■□□□□ 0.08
Nup98-204ENSMUST00000211005 Mrc2Q64449 1479 aa15.5■□□□□ 0.07
Nup98-204ENSMUST00000211005 Ccdc18Q640L5 1455 aa15.47■□□□□ 0.07
Nup98-204ENSMUST00000211005 Il27Q8K3I6 234 aa15.45■□□□□ 0.06
Nup98-204ENSMUST00000211005 Gab3Q8BSM5 595 aa15.44■□□□□ 0.06
Nup98-204ENSMUST00000211005 Npm1Q61937 292 aaKnown RBP15.4■□□□□ 0.06
Nup98-204ENSMUST00000211005 Kif21aQ9QXL2 1672 aa15.38■□□□□ 0.05
Nup98-204ENSMUST00000211005 Grin2bQ01097 1482 aa15.36■□□□□ 0.05
Nup98-204ENSMUST00000211005 Rapgef2Q8CHG7 1496 aa15.32■□□□□ 0.04
Nup98-204ENSMUST00000211005 LrpprcQ6PB66 1392 aaKnown RBP15.32■□□□□ 0.04
Nup98-204ENSMUST00000211005 PtprkP35822 1457 aa15.3■□□□□ 0.04
Nup98-204ENSMUST00000211005 NrkQ9R0G8 1455 aa15.3■□□□□ 0.04
Nup98-204ENSMUST00000211005 PogzQ8BZH4 1409 aaKnown RBP15.28■□□□□ 0.04
Nup98-204ENSMUST00000211005 Shroom4Q1W617 1475 aa15.27■□□□□ 0.04
Nup98-204ENSMUST00000211005 Dhx29Q6PGC1 1365 aaKnown RBP15.26■□□□□ 0.03
Nup98-204ENSMUST00000211005 Duox2A2AQ99 1517 aa15.24■□□□□ 0.03
Nup98-204ENSMUST00000211005 Crocc2F6XLV1 1638 aa15.23■□□□□ 0.03
Nup98-204ENSMUST00000211005 Eif4g1Q6NZJ6 1600 aaKnown RBP15.21■□□□□ 0.03
Nup98-204ENSMUST00000211005 Npm2Q80W85 207 aa15.2■□□□□ 0.02
Nup98-204ENSMUST00000211005 Cep162Q6ZQ06 1403 aa15.2■□□□□ 0.02
Nup98-204ENSMUST00000211005 Efcab5A0JP43 1406 aa15.19■□□□□ 0.02
Nup98-204ENSMUST00000211005 Lrriq1Q0P5X1 1673 aa15.18■□□□□ 0.02
Nup98-204ENSMUST00000211005 Samd9lQ69Z37 1561 aa15.17■□□□□ 0.02
Nup98-204ENSMUST00000211005 Arhgap35Q91YM2 1499 aa15.14■□□□□ 0.01
Nup98-204ENSMUST00000211005 Plb1Q3TTY0 1478 aa15.13■□□□□ 0.01
Nup98-204ENSMUST00000211005 Urb2E9Q7L1 1524 aaKnown RBP15.13■□□□□ 0.01
Nup98-204ENSMUST00000211005 Mroh2bQ7M6Y6 1581 aa15.1■□□□□ 0.01
Nup98-204ENSMUST00000211005 Map3k1P53349 1493 aa15.07■□□□□ 0
Nup98-204ENSMUST00000211005 Myt1lP97500 1187 aa15.05■□□□□ 0
Nup98-204ENSMUST00000211005 SynmQ70IV5 1561 aa15.04■□□□□ -0
Nup98-204ENSMUST00000211005 Rad54l2Q99NG0 1466 aa15.04■□□□□ -0
Nup98-204ENSMUST00000211005 Zeb1Q64318 1117 aa15.04■□□□□ -0
Nup98-204ENSMUST00000211005 Setd1bQ8CFT2 1985 aa15.01□□□□□ -0.01
Nup98-204ENSMUST00000211005 Disp1Q3TDN0 1521 aa15□□□□□ -0.01
Nup98-204ENSMUST00000211005 Ift140E9PY46 1464 aa14.99□□□□□ -0.01
Nup98-204ENSMUST00000211005 AqrQ8CFQ3 1481 aaKnown RBP14.98□□□□□ -0.01
Nup98-204ENSMUST00000211005 Magi3Q9EQJ9 1476 aa14.98□□□□□ -0.01
Nup98-204ENSMUST00000211005 Clip1Q922J3 1391 aa14.95□□□□□ -0.02
Nup98-204ENSMUST00000211005 Pla2r1Q62028 1487 aa14.95□□□□□ -0.02
Nup98-204ENSMUST00000211005 Grin2aP35436 1464 aa14.94□□□□□ -0.02
Nup98-204ENSMUST00000211005 Pbrm1Q8BSQ9 1634 aaKnown RBP14.94□□□□□ -0.02
Nup98-204ENSMUST00000211005 Eif4g3Q80XI3 1579 aaKnown RBP14.94□□□□□ -0.02
Nup98-204ENSMUST00000211005 Carmil1Q6EDY6 1374 aa14.93□□□□□ -0.02
Nup98-204ENSMUST00000211005 Ehmt2Q9Z148 1263 aaKnown RBP14.92□□□□□ -0.02
Nup98-204ENSMUST00000211005 Nup160Q9Z0W3 1402 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms