RNA–Protein interactions for RNA: ENSMUST00000200959.1

Scn8a-207, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 3 BASIC

Gene Scn8a, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-207ENSMUST00000200959 Kcnh5Q920E3 988 aa11.3□□□□□ -0.6
Scn8a-207ENSMUST00000200959 Senp3Q9EP97 568 aaKnown RBP11.29□□□□□ -0.6
Scn8a-207ENSMUST00000200959 Cyp2c68K7N6C2 491 aa11.28□□□□□ -0.6
Scn8a-207ENSMUST00000200959 Sumf1Q8R0F3 372 aa11.28□□□□□ -0.6
Scn8a-207ENSMUST00000200959 Cnga1P29974 684 aa11.27□□□□□ -0.61
Scn8a-207ENSMUST00000200959 CenpjQ569L8 1344 aa11.27□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Cyp2c67Q569X9 491 aa11.26□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Gtf2e1Q9D0D5 440 aa11.26□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Exosc9Q9JHI7 438 aaKnown RBP11.26□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Fam50bQ9WTJ8 334 aa11.26□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Elp1Q7TT37 1333 aaKnown RBP11.26□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Col11a2Q64739 1736 aa11.26□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Scn7aB1AYL1 1681 aa11.25□□□□□ -0.61
Scn8a-207ENSMUST00000200959 B4galnt4Q766D5 1034 aa11.25□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Rps6ka4Q9Z2B9 773 aa11.25□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Togaram1Q6A070 1776 aaKnown RBP11.25□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Col15a1O35206 1367 aa11.25□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Adgrb1Q3UHD1 1582 aa11.24□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Plch1Q4KWH5 1682 aa11.24□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Bicdl1A0JNT9 577 aa11.24□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Mex3cQ05A36 652 aaKnown RBP11.24□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Ubr3Q5U430 1889 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Gm21680A0A0G2JGR8 267 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Plekhd1B2RPU2 505 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 NogP97466 232 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Cc2d1aQ8K1A6 943 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Fbxo33Q8VE08 562 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Klc3Q91W40 508 aa11.23□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Znf335A2A5K6 1337 aa11.22□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Rbm46P86049 533 aa11.22□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Kiaa1107Q80TK0 1369 aa11.22□□□□□ -0.61
Scn8a-207ENSMUST00000200959 FanciQ8K368 1330 aa11.22□□□□□ -0.61
Scn8a-207ENSMUST00000200959 CpzQ8R4V4 654 aa11.22□□□□□ -0.61
Scn8a-207ENSMUST00000200959 SnrkQ8VDU5 748 aa11.22□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Klrk1O54709 232 aa11.21□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Foxd1Q61345 456 aa11.21□□□□□ -0.61
Scn8a-207ENSMUST00000200959 TrhQ62361 256 aa11.21□□□□□ -0.61
Scn8a-207ENSMUST00000200959 Gm10471E9Q1C7 252 aa11.2□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Larp1Q6ZQ58 1072 aaKnown RBP11.2□□□□□ -0.62
Scn8a-207ENSMUST00000200959 StrcQ8VIM6 1809 aa11.19□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Tmf1B9EKI3 1091 aa11.19□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Neurod1Q60867 357 aa11.19□□□□□ -0.62
Scn8a-207ENSMUST00000200959 DaglaQ6WQJ1 1044 aa11.19□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Micall1Q8BGT6 870 aa11.19□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Cdk12Q14AX6 1484 aaKnown RBP11.19□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Tgfb2P27090 414 aa11.18□□□□□ -0.62
Scn8a-207ENSMUST00000200959 EgfrQ01279 1210 aa11.18□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Speer4bQ9D9F7 267 aa11.18□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Tlr8P58682 1032 aa11.17□□□□□ -0.62
Scn8a-207ENSMUST00000200959 C4bP01029 1738 aa11.16□□□□□ -0.62
Scn8a-207ENSMUST00000200959 NppbP40753 121 aa11.16□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Nedd4P46935 887 aaKnown RBP11.16□□□□□ -0.62
Scn8a-207ENSMUST00000200959 ApobrQ8VBT6 942 aa11.16□□□□□ -0.62
Scn8a-207ENSMUST00000200959 PdgfdQ925I7 370 aa11.16□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Frmpd3A0A140LIW3 1774 aa11.16□□□□□ -0.62
Scn8a-207ENSMUST00000200959 Ano8Q6PB70 1060 aa11.15□□□□□ -0.62
Scn8a-207ENSMUST00000200959 ScaperF8VQ70 1398 aaKnown RBP11.15□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Gm13023A2A8N2 498 aa11.14□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Hoxc9P09633 260 aa11.14□□□□□ -0.63
Scn8a-207ENSMUST00000200959 1810065E05RikQ5NC41 235 aa11.14□□□□□ -0.63
Scn8a-207ENSMUST00000200959 CoblQ5NBX1 1337 aaKnown RBP11.13□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Slurp2P0DP59 97 aa11.13□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Ccnl1Q52KE7 532 aaKnown RBP11.13□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Phf23Q8BSN5 401 aa11.13□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Srcin1Q9QWI6 1250 aa11.13□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Tspoap1Q7TNF8 1846 aa11.12□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Fam83gQ5SWY7 812 aa11.12□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Znf428Q8C1M2 176 aa11.12□□□□□ -0.63
Scn8a-207ENSMUST00000200959 TkfcQ8VC30 578 aa11.12□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Col24a1Q30D77 1733 aa11.12□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Trpm3Q5F4S9 1721 aa11.12□□□□□ -0.63
Scn8a-207ENSMUST00000200959 XpcP51612 930 aa11.11□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Eid3Q3V124 375 aa11.11□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Cdca7Q9D0M2 382 aa11.11□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Pik3ap1Q9EQ32 811 aa11.11□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Tjp1P39447 1745 aaKnown RBP11.1□□□□□ -0.63
Scn8a-207ENSMUST00000200959 VegfbP49766 207 aa11.1□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Ccne1Q61457 408 aa11.1□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Gjd4Q8BSD4 364 aa11.1□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Pde3aQ9Z0X4 1141 aa11.1□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Spata31d1bE9QA57 1361 aa11.1□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Parp14Q2EMV9 1817 aa11.09□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Col4a5Q63ZW6 1691 aa11.09□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Adcy9P51830 1353 aa11.09□□□□□ -0.63
Scn8a-207ENSMUST00000200959 Aplp2Q06335 707 aa11.09□□□□□ -0.63
Scn8a-207ENSMUST00000200959 InsrP15208 1372 aa11.08□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Usp19Q3UJD6 1360 aa11.08□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Hspa5P20029 655 aaKnown RBP11.08□□□□□ -0.64
Scn8a-207ENSMUST00000200959 CemipQ8BI06 1361 aa11.07□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Atf5O70191 283 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Smarcc1P97496 1104 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Dusp27Q148W8 1138 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Ciapin1Q8WTY4 309 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Klhdc4Q921I2 584 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Ric1Q69ZJ7 1422 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Setdb1O88974 1307 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Thsd7bQ6P4U0 1607 aa11.06□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Hmgb2P30681 210 aaKnown RBP11.05□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Miga2Q8BK03 593 aa11.05□□□□□ -0.64
Scn8a-207ENSMUST00000200959 Ppp1r3fQ9JIG4 799 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 130.2 ms