RNA–Protein interactions for RNA: ENSMUST00000197480.4

Smarcc1-203, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

TSL 1 (best) BASIC

Gene Smarcc1, Length 1,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-203ENSMUST00000197480 Ppp1r3fQ9JIG4 799 aa31.92■■■□□ 2.7
Smarcc1-203ENSMUST00000197480 Txnrd1Q9JMH6 613 aa31.89■■■□□ 2.7
Smarcc1-203ENSMUST00000197480 Marf1Q8BJ34 1730 aaKnown RBP31.89■■■□□ 2.7
Smarcc1-203ENSMUST00000197480 Nectin2P32507 530 aa31.88■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Tmco5bQ80X59 307 aa31.88■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Slit1Q80TR4 1531 aa31.88■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 1700019A02RikA0A087WPV9 146 aa31.88■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Cavin2Q63918 418 aaKnown RBP31.88■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Zfp142G5E869 1843 aa31.87■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Pibf1E9Q6K3 756 aa31.87■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Gimap5Q8BWF2 308 aa31.87■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Supt16hQ920B9 1047 aa31.87■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 ZgpatQ8VDM1 511 aa31.86■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Aox2Q5SGK3 1345 aa31.85■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Igsf1Q7TQA1 1317 aa31.85■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Acsbg1Q99PU5 721 aa31.85■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Abcc12Q80WJ6 1366 aa31.84■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Duxf3A0A0N4SV92 674 aa31.84■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 CenpbP27790 599 aa31.84■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Q3UPC7 1272 aa31.84■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Znf330Q922H9 316 aa31.84■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Cdhr2E9Q7P9 1308 aa31.84■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 AampJ3QN89 436 aa31.83■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 HdgfP51859 237 aaKnown RBP31.83■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 RgmbQ7TQ33 436 aa31.83■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Maco1Q7TQE6 664 aaKnown RBP31.83■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Foxp4Q9DBY0 795 aaKnown RBP31.83■■■□□ 2.69
Smarcc1-203ENSMUST00000197480 Aldh1l1Q8R0Y6 902 aa31.82■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 Tnks1bp1P58871 1720 aa31.82■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 Zranb3Q6NZP1 1069 aa31.81■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 MarsQ68FL6 902 aaKnown RBP31.79■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 Msh6P54276 1358 aaKnown RBP31.79■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 Chl1P70232 1209 aa31.79■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 ThemisQ8BGW0 636 aa31.79■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 Smim5Q8BT42 78 aa31.77■■■□□ 2.68
Smarcc1-203ENSMUST00000197480 Nutm1Q8BHP2 1126 aa31.76■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Slx1bQ8BX32 270 aa31.75■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Nkx2-3P97334 362 aa31.73■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Tns2Q8CGB6 1400 aa31.73■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Bcl11bQ99PV8 884 aa31.73■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Plekhd1B2RPU2 505 aa31.72■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Q3TQI7 289 aaKnown RBP31.71■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Rlbp1Q9Z275 317 aa31.71■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Dlg5E9Q9R9 1921 aa31.7■■■□□ 2.67
Smarcc1-203ENSMUST00000197480 Pak3Q61036 559 aa31.69■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Cyp2d12Q8BVD2 504 aa31.69■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Pdzd9Q9D9M4 266 aa31.69■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Atf5O70191 283 aa31.69■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Smc5Q8CG46 1101 aaKnown RBP31.69■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Ric3Q8BPM6 367 aa31.68■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Fam50bQ9WTJ8 334 aa31.68■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Chpf2Q3UU43 768 aa31.67■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Ybx3Q9JKB3 361 aaKnown RBP31.67■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 MvpQ9EQK5 861 aa31.67■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Zpr1Q62384 459 aa31.66■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Phkg2Q9DB30 406 aa31.66■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Pard3Q99NH2 1333 aa31.66■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Aifm3Q3TY86 605 aa31.65■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Btbd11Q6GQW0 1109 aa31.65■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 4930572O03RikQ8C5Y0 211 aa31.65■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Ankrd44B2RXR6 993 aa31.64■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Cc2d1aQ8K1A6 943 aa31.64■■■□□ 2.66
Smarcc1-203ENSMUST00000197480 Eif4a1P60843 406 aaKnown RBP31.63■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Znf526Q8BI66 675 aa31.63■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Aplp1Q03157 653 aa31.63■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Sv2bQ8BG39 683 aa31.62■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Tnnt1O88346 262 aa31.61■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Chmp7Q8R1T1 451 aa31.61■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Col1a2Q01149 1372 aa31.6■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Rtl5Q5DTT4 599 aa31.59■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Arhgef1Q61210 920 aaKnown RBP31.59■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Liat1Q810M6 228 aa31.59■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Ubr2Q6WKZ8 1755 aa31.59■■■□□ 2.65
Smarcc1-203ENSMUST00000197480 Fam83gQ5SWY7 812 aa31.57■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Ccdc155Q80VJ8 648 aa31.57■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Irx6Q9ER75 438 aa31.57■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Tom1O88746 492 aa31.57■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Ddx54Q8K4L0 874 aaKnown RBP31.57■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Chmp5Q9D7S9 219 aa31.57■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 B4galnt3Q6L8S8 986 aa31.56■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Bcl2l12Q9D3J3 255 aa31.56■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Pnpla7A2AJ88 1352 aa31.54■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Qtrt2B8ZXI1 415 aa31.54■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Asic4Q7TNS7 539 aa31.54■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Chmp4bQ9D8B3 224 aaKnown RBP31.54■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Speer4bQ9D9F7 267 aa31.54■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Ssfa2Q922B9 1252 aa31.53■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Dbr1Q923B1 550 aa31.53■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 BcorQ8CGN4 1759 aa31.53■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Eif3bQ8JZQ9 803 aaKnown RBP31.53■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Lrrc59Q922Q8 307 aaKnown RBP31.53■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Armcx1Q9CX83 456 aa31.53■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Hspa1lP16627 641 aa31.52■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 EspnQ9ET47 871 aa31.52■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Larp1Q6ZQ58 1072 aaKnown RBP31.51■■■□□ 2.64
Smarcc1-203ENSMUST00000197480 Cnksr1A2A9K7 700 aa31.49■■■□□ 2.63
Smarcc1-203ENSMUST00000197480 Cluap1Q8R3P7 413 aa31.49■■■□□ 2.63
Smarcc1-203ENSMUST00000197480 Akap11E9Q777 1895 aa31.48■■■□□ 2.63
Smarcc1-203ENSMUST00000197480 Aldh1l2Q8K009 923 aa31.48■■■□□ 2.63
Smarcc1-203ENSMUST00000197480 AU019823E9PUQ3 292 aa31.47■■■□□ 2.63
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms